prot_S-dermatodea_contig10362.269.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig10362.269.1
Unique Nameprot_S-dermatodea_contig10362.269.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length161
Homology
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BLAST of mRNA_S-dermatodea_contig10362.269.1 vs. uniprot
Match: D7FPQ2_ECTSI (Trigger_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPQ2_ECTSI)

HSP 1 Score: 138 bits (347), Expect = 3.410e-38
Identity = 71/154 (46.10%), Postives = 102/154 (66.23%), Query Frame = 0 
Query:    1 MQTQELEQVVDFISAKRLGVVHEGQGIFSFQFKIEAPGSTTERLNDRITRAYKERFTFPGFEEGEIPPQFVGELNQYVLEEVMNDTILTALDAHGLVGVAAADGGASEVEILEDIKDLLEAFKPGKPLAFSCTINARARFVVGQGSGAADSAAV 154
            M+ +ELEQ+   I  K+L +V E +G++ ++F IEAPG  T+ L+ RI R  K +  FPG+ +GEIPP+ + E  +YV+EEVMN+ + TAL  + LVG   A G  SE +I  DI+D+L+ FKPGKPL+FSCT +A+ +     G    D+AAV
Sbjct:   47 MEVEELEQLNPAIKGKKLEIVDEAEGVWKYEFDIEAPGPRTQSLHHRILREIKNKSDFPGYRKGEIPPRLMPEATKYVIEEVMNEGLQTALATYNLVG---AKGDGSEADIKNDIEDMLKVFKPGKPLSFSCTFDAKPKPEDEDGGPDDDAAAV 197
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BLAST of mRNA_S-dermatodea_contig10362.269.1 vs. uniprot
Match: A0A835YVH3_9STRA (Trigger_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVH3_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 8.060e-22
Identity = 46/132 (34.85%), Postives = 82/132 (62.12%), Query Frame = 0 
Query:    6 LEQVVDFISAKRLGVVHEGQGIFSFQFKIEAPGSTTERLNDRITRAYKERFTFPGFEEGEIPPQFVGELNQYVLEEVMNDTILTALDAHGLVGVAAADGGASEVEILEDIKDLLEAFKPGKPLAFSCTINAR 137
            L   +D + A RL  V E  GI+ ++F+IE  G  T+ + + I +  +++  FPGF +G+IPP    ++  + +EE +N+++++AL AHGL  +   +G A   E+ + ++DL+ AFKPGK L+ +  +NA+
Sbjct:   50 LAHAMDGVKATRLEAVDEAAGIYQYEFEIEIQGDVTQNIYNGIEKELRKKAAFPGFRKGQIPPFARKQVITFSVEEAVNESLISALAAHGLEKLEGKEGNA---ELTQQVEDLVAAFKPGKTLSINAKVNAK 178
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BLAST of mRNA_S-dermatodea_contig10362.269.1 vs. uniprot
Match: A0A1Z5JG88_FISSO (Trigger_N domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JG88_FISSO)

HSP 1 Score: 72.4 bits (176), Expect = 1.160e-12
Identity = 32/116 (27.59%), Postives = 67/116 (57.76%), Query Frame = 0 
Query:   20 VVHEGQGIFSFQFKIEAPGSTTERLNDRITRAYKERFTFPGFEEGEIPPQFVGELNQYVLEEVMNDTILTALDAHGLVGVAAADGGASEVEILEDIKDLLEAFKPGKPLAFSCTIN 135
            V  E    + F       G+  +  +  + +  K++  FPGF +G++PP  + ++ Q+ ++E +  T+  A+DAHGL  ++ +DG   +VE+ E+++D+++ +K G P+ F+  +N
Sbjct:   66 VKSENGPAYQFWMTATVDGNMIKDNHTELLKNAKKKANFPGFRKGQVPPYAMPQITQFSIQEAIIKTVEAAVDAHGLKALSGSDG---QVEVKENVEDMVKGYKLGDPIQFTAVLN 178
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10362.269.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FPQ2_ECTSI3.410e-3846.10Trigger_N domain-containing protein n=2 Tax=Ectoca... [more]
A0A835YVH3_9STRA8.060e-2234.85Trigger_N domain-containing protein n=1 Tax=Tribon... [more]
A0A1Z5JG88_FISSO1.160e-1227.59Trigger_N domain-containing protein n=2 Tax=Fistul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008881Trigger factor, ribosome-binding, bacterialPFAMPF05697Trigger_Ncoord: 31..137
e-value: 3.4E-5
score: 24.2
IPR036611Trigger factor ribosome-binding domain superfamilySUPERFAMILY102735Trigger factor ribosome-binding domaincoord: 30..141

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10362contigS-dermatodea_contig10362:2576..6611 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10362.269.1mRNA_S-dermatodea_contig10362.269.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig10362 2132..6627 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig10362.269.1 ID=prot_S-dermatodea_contig10362.269.1|Name=mRNA_S-dermatodea_contig10362.269.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=161bp
MQTQELEQVVDFISAKRLGVVHEGQGIFSFQFKIEAPGSTTERLNDRITR
AYKERFTFPGFEEGEIPPQFVGELNQYVLEEVMNDTILTALDAHGLVGVA
AADGGASEVEILEDIKDLLEAFKPGKPLAFSCTINARARFVVGQGSGAAD
SAAVADGGRD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008881Trigger_fac_ribosome-bd_bac
IPR036611Trigger_fac_ribosome-bd_sf