prot_S-dermatodea_contig10304.233.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig10304.233.1
Unique Nameprot_S-dermatodea_contig10304.233.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length91
Homology
BLAST of mRNA_S-dermatodea_contig10304.233.1 vs. uniprot
Match: D8LUC7_ECTSI (Alb3 homolog, thylakoidal inner membrane insertase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LUC7_ECTSI)

HSP 1 Score: 100 bits (250), Expect = 4.230e-23
Identity = 55/85 (64.71%), Postives = 64/85 (75.29%), Query Frame = 0
Query:    7 AAAVVEEGKGGLFGTGLNINPIEFLTALTEKSITGIHDLLQGMGVPSAYGISIIFFTLFVKTITFPLTYQQLASTTKMQSIAPKV 91
            AAAV EE            +PI+ LT +TE +ITG+HD+L  MGVPSAYGISII FTLFVK ITFPLTYQQL+STTKMQ++ PKV
Sbjct:   91 AAAVAEEAAXXXX---XGFHPIQLLTGVTEGAITGLHDVLASMGVPSAYGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPKV 172          
BLAST of mRNA_S-dermatodea_contig10304.233.1 vs. uniprot
Match: A0A835YLS0_9STRA (Alb3-like protein, thylakoidal inner membrane insertase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLS0_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 1.700e-15
Identity = 39/61 (63.93%), Postives = 48/61 (78.69%), Query Frame = 0
Query:   31 LTALTEKSITGIHDLLQGMGVPSAYGISIIFFTLFVKTITFPLTYQQLASTTKMQSIAPKV 91
            L   TE +IT +HD L+G GV  +YG +II FTLF+K +TFPLTYQQLASTTKMQ++ PKV
Sbjct:  101 LVTATEAAITMLHDALKGAGVEQSYGYAIIGFTLFIKGVTFPLTYQQLASTTKMQTLQPKV 161          
BLAST of mRNA_S-dermatodea_contig10304.233.1 vs. uniprot
Match: A0A7R9UFB5_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UFB5_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 1.720e-13
Identity = 41/91 (45.05%), Postives = 58/91 (63.74%), Query Frame = 0
Query:    1 MDASGAAAAVVEEGKGGLFGTGLNINPIEFLTALTEKSITGIHDLLQGMGVPSAYGISIIFFTLFVKTITFPLTYQQLASTTKMQSIAPKV 91
             DA+  A+ V +  +GG         P+  L A T  +ITG+HDLL+G+G+ + YG +II FTL +K +TFPL  +QL ST KMQ+I PK+
Sbjct:   79 QDAADVASEVAKSDQGG--------GPLGPLIAGTSFAITGLHDLLKGLGLQNPYGYAIILFTLLIKAVTFPLNAKQLESTGKMQAINPKI 161          
BLAST of mRNA_S-dermatodea_contig10304.233.1 vs. uniprot
Match: M1V7G8_CYAM1 (Chloroplast membrane protein ALBINO3 or ARTEMIS n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1V7G8_CYAM1)

HSP 1 Score: 67.4 bits (163), Expect = 4.130e-11
Identity = 33/58 (56.90%), Postives = 41/58 (70.69%), Query Frame = 0
Query:   34 LTEKSITGIHDLLQGMGVPSAYGISIIFFTLFVKTITFPLTYQQLASTTKMQSIAPKV 91
            L E  ITG  D L  +GVP +YG +IIF T+ VK ITFPL Y+Q+ ST  MQ++APKV
Sbjct:  196 LIETIITGTGDTLAALGVPGSYGFAIIFLTIIVKAITFPLNYKQMKSTMAMQALAPKV 253          
BLAST of mRNA_S-dermatodea_contig10304.233.1 vs. uniprot
Match: A0A7S0G1P8_9RHOD (Hypothetical protein n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G1P8_9RHOD)

HSP 1 Score: 64.7 bits (156), Expect = 2.920e-10
Identity = 40/89 (44.94%), Postives = 51/89 (57.30%), Query Frame = 0
Query:    3 ASGAAAAVVEEGKGGLFGTGLNINPIEFLTALTEKSITGIHDLLQGMGVPSAYGISIIFFTLFVKTITFPLTYQQLASTTKMQSIAPKV 91
            A+ A  AV  E K GL+G             L E SI GIH+ L G+GVP AYG SII FT+ +K +T PL  +Q+ ST +MQ + P V
Sbjct:   19 AAPAVEAVAGEEKRGLWGN---------FVKLIESSIIGIHNGLSGVGVPYAYGFSIILFTIGIKVLTLPLNSKQMESTMRMQDMQPMV 98          
BLAST of mRNA_S-dermatodea_contig10304.233.1 vs. uniprot
Match: A0A7S1T8R1_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T8R1_9RHOD)

HSP 1 Score: 63.5 bits (153), Expect = 8.950e-10
Identity = 29/60 (48.33%), Postives = 42/60 (70.00%), Query Frame = 0
Query:   32 TALTEKSITGIHDLLQGMGVPSAYGISIIFFTLFVKTITFPLTYQQLASTTKMQSIAPKV 91
            T + E  +  +HD+L   GVP +YG +II FT+ VK +T+PL +QQ++ST KMQ + PKV
Sbjct:  110 TKVIESLVISLHDVLAHSGVPYSYGFAIILFTVGVKALTYPLNFQQMSSTMKMQGLQPKV 169          
BLAST of mRNA_S-dermatodea_contig10304.233.1 vs. uniprot
Match: A0A7S2FBB2_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FBB2_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 2.840e-8
Identity = 31/58 (53.45%), Postives = 43/58 (74.14%), Query Frame = 0
Query:   34 LTEKSITGIHDLLQGMGVPSAYGISIIFFTLFVKTITFPLTYQQLASTTKMQSIAPKV 91
            L E SIT +++ ++ +    +YGISII FTL VK +T+PLTYQQL ST KMQ++ P+V
Sbjct:  100 LMESSITLLNNGIKSVTGADSYGISIILFTLGVKGLTYPLTYQQLESTQKMQALQPRV 157          
BLAST of mRNA_S-dermatodea_contig10304.233.1 vs. uniprot
Match: A0A7S1DMA5_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DMA5_HEMAN)

HSP 1 Score: 57.0 bits (136), Expect = 1.810e-7
Identity = 34/90 (37.78%), Postives = 49/90 (54.44%), Query Frame = 0
Query:    6 AAAAVVEEGK----GGLFGTGLNINPIEFLTALTEKSITGIHDLLQGMGVPSAYGISIIFFTLFVKTITFPLTYQQLASTTKMQSIAPKV 91
            AA  V EE K    GG+FG          L       +  +H + +   +P A+G +I+ FT+FVK IT+PL Y+Q+AST  MQ + PK+
Sbjct:  135 AANTVTEEAKKEDDGGIFG---------LLVKGVSTCLVTLHSIFKAANLPGAWGWAIMTFTIFVKAITYPLNYKQMASTISMQKLQPKL 215          
BLAST of mRNA_S-dermatodea_contig10304.233.1 vs. uniprot
Match: A0A7S0XYI9_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0XYI9_HEMAN)

HSP 1 Score: 57.0 bits (136), Expect = 1.890e-7
Identity = 34/90 (37.78%), Postives = 49/90 (54.44%), Query Frame = 0
Query:    6 AAAAVVEEGK----GGLFGTGLNINPIEFLTALTEKSITGIHDLLQGMGVPSAYGISIIFFTLFVKTITFPLTYQQLASTTKMQSIAPKV 91
            AA  V EE K    GG+FG          L       +  +H + +   +P A+G +I+ FT+FVK IT+PL Y+Q+AST  MQ + PK+
Sbjct:  133 AANTVTEEAKKEDDGGIFG---------LLVKGVSTCLVTLHSIFKAANLPGAWGWAIMTFTIFVKAITYPLNYKQMASTISMQKLQPKL 213          
BLAST of mRNA_S-dermatodea_contig10304.233.1 vs. uniprot
Match: A0A7S2EB53_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EB53_TRICV)

HSP 1 Score: 55.1 bits (131), Expect = 8.840e-7
Identity = 28/63 (44.44%), Postives = 44/63 (69.84%), Query Frame = 0
Query:   30 FLTALTEKSITGIHDLLQGMGVPS-AYGISIIFFTLFVKTITFPLTYQQLASTTKMQSIAPKV 91
            FLT   E  +  IH +L  MG+   A+G+SI+  T+F+K +T+PLT QQL ST++MQ++ P++
Sbjct:  107 FLTGPIEGLLNIIHGVLVSMGMDKDAWGVSIVGMTVFIKILTYPLTKQQLESTSRMQALQPQI 169          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10304.233.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D8LUC7_ECTSI4.230e-2364.71Alb3 homolog, thylakoidal inner membrane insertase... [more]
A0A835YLS0_9STRA1.700e-1563.93Alb3-like protein, thylakoidal inner membrane inse... [more]
A0A7R9UFB5_9STRA1.720e-1345.05Hypothetical protein (Fragment) n=2 Tax=Pinguiococ... [more]
M1V7G8_CYAM14.130e-1156.90Chloroplast membrane protein ALBINO3 or ARTEMIS n=... [more]
A0A7S0G1P8_9RHOD2.920e-1044.94Hypothetical protein n=3 Tax=Rhodosorus marinus Ta... [more]
A0A7S1T8R1_9RHOD8.950e-1048.33Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S2FBB2_9STRA2.840e-853.45Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A7S1DMA5_HEMAN1.810e-737.78Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7S0XYI9_HEMAN1.890e-737.78Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A7S2EB53_TRICV8.840e-744.44Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001708Membrane insertase YidC/ALB3/OXA1/COX18PFAMPF0209660KD_IMPcoord: 55..91
e-value: 9.0E-10
score: 38.7
IPR001708Membrane insertase YidC/ALB3/OXA1/COX18PANTHERPTHR12428OXA1coord: 14..90
NoneNo IPR availablePANTHERPTHR12428:SF14INNER MEMBRANE PROTEIN ALBINO3, CHLOROPLASTICcoord: 14..90
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 76..91
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 54..75
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..53
NoneNo IPR availableTMHMMTMhelixcoord: 53..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10304contigS-dermatodea_contig10304:150..422 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10304.233.1mRNA_S-dermatodea_contig10304.233.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig10304 150..437 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig10304.233.1 ID=prot_S-dermatodea_contig10304.233.1|Name=mRNA_S-dermatodea_contig10304.233.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=91bp
MDASGAAAAVVEEGKGGLFGTGLNINPIEFLTALTEKSITGIHDLLQGMG
VPSAYGISIIFFTLFVKTITFPLTYQQLASTTKMQSIAPKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001708YidC/ALB3/OXA1/COX18