prot_S-dermatodea_contig1029.217.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig1029.217.1
Unique Nameprot_S-dermatodea_contig1029.217.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length114
Homology
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BLAST of mRNA_S-dermatodea_contig1029.217.1 vs. uniprot
Match: A0A6H5J9L7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9L7_9PHAE)

HSP 1 Score: 62.8 bits (151), Expect = 4.150e-9
Identity = 39/92 (42.39%), Postives = 54/92 (58.70%), Query Frame = 0 
Query:    2 ALLALSAISIKLSGVTPPSFASSHDSGSDVGIRDGAVALWGTFLWKGLALELLLQHFDGIGSALICMSIIAATMLMVFPIYHYVTPTAIALP 93
            ALLAL+A S K SG   PS      + S V      V  W  FL KGLAL+LL +HF+GIG AL CM ++A   ++ +P++  +T +  A+P
Sbjct:   44 ALLALAACSAKFSGAAAPSARFETSAASTV------VDDWTAFLTKGLALDLLARHFEGIGKALACMFVMALVAILAYPLHLLITRSPSAVP 129
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BLAST of mRNA_S-dermatodea_contig1029.217.1 vs. uniprot
Match: D7FQW2_ECTSI (Sterol or diacylglycerol O-acyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQW2_ECTSI)

HSP 1 Score: 61.6 bits (148), Expect = 1.050e-8
Identity = 44/108 (40.74%), Postives = 57/108 (52.78%), Query Frame = 0 
Query:    2 ALLALSAISIKLSGVTPPSFASSHDSGSDVGIRDGAVALWGTFLWKGLALELLLQHFDGIGSALICMSIIAATMLMVFPIYHYVTPTAIALPTVVGWVIAVWGAGKFQ 109
            ALLAL+A S K SG   PS      + S V      V  W  FL KGLAL+LL +HF+GIG AL CM ++A    + +P++  +T    A+P          GAGK Q
Sbjct:   44 ALLALAACSAKFSGAAAPSADFETPAASTV------VDEWTAFLTKGLALDLLARHFEGIGKALACMFVMALVATLAYPLHLLITRPPSAVPA--------GGAGKGQ 137
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1029.217.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J9L7_9PHAE4.150e-942.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQW2_ECTSI1.050e-840.74Sterol or diacylglycerol O-acyltransferase n=1 Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 88..106
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 107..114
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 38..55
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..37
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 83..87
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 62..82
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 56..61
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..13
NoneNo IPR availableTMHMMTMhelixcoord: 89..106
NoneNo IPR availableTMHMMTMhelixcoord: 60..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1029contigS-dermatodea_contig1029:2136..3004 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1029.217.1mRNA_S-dermatodea_contig1029.217.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig1029 2136..3006 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig1029.217.1 ID=prot_S-dermatodea_contig1029.217.1|Name=mRNA_S-dermatodea_contig1029.217.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=114bp
AALLALSAISIKLSGVTPPSFASSHDSGSDVGIRDGAVALWGTFLWKGLA
LELLLQHFDGIGSALICMSIIAATMLMVFPIYHYVTPTAIALPTVVGWVI
AVWGAGKFQWGVAS
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