prot_S-dermatodea_contig1028.207.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig1028.207.1
Unique Nameprot_S-dermatodea_contig1028.207.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length177
Homology
[Close]
BLAST of mRNA_S-dermatodea_contig1028.207.1 vs. uniprot
Match: A0A6H5LM15_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LM15_9PHAE)

HSP 1 Score: 98.6 bits (244), Expect = 8.300e-21
Identity = 55/102 (53.92%), Postives = 64/102 (62.75%), Query Frame = 0 
Query:   72 EGASRRLFVKLHSARTRRAAITNEHCRRSSILEMSALGRLGRTWGLYPWAPYLPRGPYHTPGAA-FQEYDW---------GPGVGGPITDGVDGSGLLQPGW 163
            EGASRRL+ KL +AR R+AA      RRSS+LEM+ALGRLGR WGLYPWAPYLPRGP+HT GA    EY           GPG+  P+      S   + GW
Sbjct:  364 EGASRRLYAKLSAARARQAAXXXXRLRRSSVLEMAALGRLGRAWGLYPWAPYLPRGPFHTHGAPPSPEYGLLDSLGGDGTGPGLALPLPPSPPSSSRWRSGW 465
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1028.207.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5LM15_9PHAE8.300e-2153.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1028contigS-dermatodea_contig1028:19257..19787 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1028.207.1mRNA_S-dermatodea_contig1028.207.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig1028 19257..19788 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig1028.207.1 ID=prot_S-dermatodea_contig1028.207.1|Name=mRNA_S-dermatodea_contig1028.207.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=177bp
ESGGGGGDAEISSSNEGDSSGIVSGDAVVAAVAGDGCGGGCESGGGGHQN
TGTTSSKSSSSNSSSRDRHREEGASRRLFVKLHSARTRRAAITNEHCRRS
SILEMSALGRLGRTWGLYPWAPYLPRGPYHTPGAAFQEYDWGPGVGGPIT
DGVDGSGLLQPGWGGGGGWGRSRTGSW
back to top