prot_S-dermatodea_contig1025.183.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig1025.183.1
Unique Nameprot_S-dermatodea_contig1025.183.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length123
Homology
BLAST of mRNA_S-dermatodea_contig1025.183.1 vs. uniprot
Match: A0A6H5L214_9PHAE (Plug_translocon domain-containing protein n=3 Tax=PX clade TaxID=569578 RepID=A0A6H5L214_9PHAE)

HSP 1 Score: 243 bits (619), Expect = 1.370e-76
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0
Query:    3 VKYQKYRGQQGTYPIKLFYTSNMPVILQTALVSNLYFLSQLLHNRYAGNLLVRLMGRWAEVEGMPGTSVPVGGLAYYISPPTTMAEILKDPVHAVIYITFILTACALFSKTWIEVSGSSAK 123
            VKYQKYRGQQGTYPIKLFYTSNMPVILQTALVSNLYFLSQLLHNRYAGNLLVRLMGRWAEVEGMPGTSVPVGGLAYYISPPTTMAEILKDPVHAVIYITFILTACALFSKTWIEVSGSSAK
Sbjct:  266 VKYQKYRGQQGTYPIKLFYTSNMPVILQTALVSNLYFLSQLLHNRYAGNLLVRLMGRWAEVEGMPGTSVPVGGLAYYISPPTTMAEILKDPVHAVIYITFILTACALFSKTWIEVSGSSAK 386          
BLAST of mRNA_S-dermatodea_contig1025.183.1 vs. uniprot
Match: A0A7S2XXJ1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXJ1_9STRA)

HSP 1 Score: 211 bits (537), Expect = 2.590e-64
Identity = 102/121 (84.30%), Postives = 111/121 (91.74%), Query Frame = 0
Query:    3 VKYQKYRGQQGTYPIKLFYTSNMPVILQTALVSNLYFLSQLLHNRYAGNLLVRLMGRWAEVEGMPGTSVPVGGLAYYISPPTTMAEILKDPVHAVIYITFILTACALFSKTWIEVSGSSAK 123
            VKYQKYRGQQGTYPIKLFYTSNMP+ILQTALVSNLYFLSQLL+NRY+GN LV+L+GRW +VEGM G SVPVGGLAYYISPP +  EIL DP HA+ YI+FILTACALFSKTWIEVSGSSAK
Sbjct:  266 VKYQKYRGQQGTYPIKLFYTSNMPIILQTALVSNLYFLSQLLYNRYSGNFLVKLLGRWQDVEGMSGQSVPVGGLAYYISPPNSFTEILADPFHALFYISFILTACALFSKTWIEVSGSSAK 386          
BLAST of mRNA_S-dermatodea_contig1025.183.1 vs. uniprot
Match: A0A6V2TM26_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2TM26_HETAK)

HSP 1 Score: 207 bits (526), Expect = 1.130e-62
Identity = 100/121 (82.64%), Postives = 109/121 (90.08%), Query Frame = 0
Query:    3 VKYQKYRGQQGTYPIKLFYTSNMPVILQTALVSNLYFLSQLLHNRYAGNLLVRLMGRWAEVEGMPGTSVPVGGLAYYISPPTTMAEILKDPVHAVIYITFILTACALFSKTWIEVSGSSAK 123
            VKYQKYRGQQGTYPIKLFYTSNMP+ILQTALVSNLYFLSQLL NRY+GN LVRL+GRW E+EG  G SVPVGG+AYYISPP ++  IL DP+HA+ Y TFILTACALFSKTWIEVSGSSAK
Sbjct:  266 VKYQKYRGQQGTYPIKLFYTSNMPIILQTALVSNLYFLSQLLWNRYSGNFLVRLLGRWQELEGGAGQSVPVGGMAYYISPPQSLGNILTDPLHAIFYFTFILTACALFSKTWIEVSGSSAK 386          
BLAST of mRNA_S-dermatodea_contig1025.183.1 vs. uniprot
Match: A0A4D9D8Z0_9STRA (Plug_translocon domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D8Z0_9STRA)

HSP 1 Score: 204 bits (519), Expect = 1.250e-61
Identity = 98/121 (80.99%), Postives = 109/121 (90.08%), Query Frame = 0
Query:    3 VKYQKYRGQQGTYPIKLFYTSNMPVILQTALVSNLYFLSQLLHNRYAGNLLVRLMGRWAEVEGMPGTSVPVGGLAYYISPPTTMAEILKDPVHAVIYITFILTACALFSKTWIEVSGSSAK 123
            VK Q+YRGQQGTYPIKLFYTSNMP+ILQTALVSNLYFLSQLLH R++GN+LVRL+GRW EVEG  G SVPVGG+AYYISPP +M EIL DP HAV Y+ FIL++CALFSKTWIEVSGSSAK
Sbjct:  268 VKSQRYRGQQGTYPIKLFYTSNMPIILQTALVSNLYFLSQLLHKRFSGNILVRLLGRWQEVEGQQGQSVPVGGIAYYISPPHSMTEILSDPFHAVFYLAFILSSCALFSKTWIEVSGSSAK 388          
BLAST of mRNA_S-dermatodea_contig1025.183.1 vs. uniprot
Match: A0A6U0GBK2_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A6U0GBK2_9STRA)

HSP 1 Score: 191 bits (485), Expect = 1.170e-59
Identity = 93/121 (76.86%), Postives = 108/121 (89.26%), Query Frame = 0
Query:    3 VKYQKYRGQQGTYPIKLFYTSNMPVILQTALVSNLYFLSQLLHNRYAGNLLVRLMGRWAEVEGMPGTSVPVGGLAYYISPPTTMAEILKDPVHAVIYITFILTACALFSKTWIEVSGSSAK 123
            VKYQKYRGQQGTYPIKLFYTSNMP+ILQTALVSNLYF+SQLL+NR   N+LVRL+G+W +VEG  G ++PVGG+AYYISPP + AEI+ DP HAV Y+ FILTACALFSKTWIEVSG+SA+
Sbjct:    1 VKYQKYRGQQGTYPIKLFYTSNMPIILQTALVSNLYFVSQLLYNRAPTNVLVRLLGKWQDVEG-GGQTIPVGGIAYYISPPQSFAEIIYDPFHAVFYLIFILTACALFSKTWIEVSGASAR 120          
BLAST of mRNA_S-dermatodea_contig1025.183.1 vs. uniprot
Match: A0A1J3JXC7_NOCCA (Protein transport protein Sec61 subunit alpha isoform 2 (Fragment) n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3JXC7_NOCCA)

HSP 1 Score: 188 bits (478), Expect = 7.930e-59
Identity = 91/122 (74.59%), Postives = 107/122 (87.70%), Query Frame = 0
Query:    3 VKYQKYRGQQGTYPIKLFYTSNMPVILQTALVSNLYFLSQLLHNRYAGNLLVRLMGRWAEVEGMPGT-SVPVGGLAYYISPPTTMAEILKDPVHAVIYITFILTACALFSKTWIEVSGSSAK 123
            VKYQKYRGQQG+YPIKLFYTSN+P+ILQTALVSNLYF SQLL+ RY+ N+LV+L+GRW E +G  GT SVPVGGLAYY+SPP ++AEI+ DP HA+ Y +FIL ACALFSKTWIEVSGSS +
Sbjct:   64 VKYQKYRGQQGSYPIKLFYTSNIPIILQTALVSNLYFFSQLLYKRYSTNVLVQLLGRWQETDGAGGTTSVPVGGLAYYVSPPQSLAEIVYDPFHAIFYFSFILIACALFSKTWIEVSGSSPR 185          
BLAST of mRNA_S-dermatodea_contig1025.183.1 vs. uniprot
Match: A0A482RU87_9ARCH (Preprotein translocase subunit SecY n=2 Tax=cellular organisms TaxID=131567 RepID=A0A482RU87_9ARCH)

HSP 1 Score: 194 bits (492), Expect = 2.340e-58
Identity = 94/121 (77.69%), Postives = 105/121 (86.78%), Query Frame = 0
Query:    3 VKYQKYRGQQGTYPIKLFYTSNMPVILQTALVSNLYFLSQLLHNRYAGNLLVRLMGRWAEVEGMPGTSVPVGGLAYYISPPTTMAEILKDPVHAVIYITFILTACALFSKTWIEVSGSSAK 123
            VKY K RGQQG YPIKLFYTSNMP+ILQTALVSNLYFLSQLL+NRY GN+LVRL+G W E++  PG SVPV GLAYYISPP T+A I KDP+H+VIY+ FIL +CALFSKTWIEVSGSS K
Sbjct:  193 VKYAKSRGQQGKYPIKLFYTSNMPIILQTALVSNLYFLSQLLYNRYGGNILVRLLGVWKELKDNPGNSVPVSGLAYYISPPQTLANIAKDPLHSVIYLAFILASCALFSKTWIEVSGSSPK 313          
BLAST of mRNA_S-dermatodea_contig1025.183.1 vs. uniprot
Match: B7GD39_PHATC (Transport protein Sec61 alpha subunit n=7 Tax=Bacillariophycidae TaxID=33850 RepID=B7GD39_PHATC)

HSP 1 Score: 194 bits (494), Expect = 3.720e-57
Identity = 92/121 (76.03%), Postives = 106/121 (87.60%), Query Frame = 0
Query:    3 VKYQKYRGQQGTYPIKLFYTSNMPVILQTALVSNLYFLSQLLHNRYAGNLLVRLMGRWAEVEGMPGTSVPVGGLAYYISPPTTMAEILKDPVHAVIYITFILTACALFSKTWIEVSGSSAK 123
            VKYQKYRGQ+G YPIKLFYTSNMP+ILQTALVSNLYF+SQLL+NR   N+LVRL+G+W EVEG  G  +PVGG+AYYISPP + AEI+ DP HAV Y+ FILTACALFSKTWIEVSG+SA+
Sbjct:  353 VKYQKYRGQEGNYPIKLFYTSNMPIILQTALVSNLYFVSQLLYNRAPTNILVRLLGKWQEVEGSAGNKIPVGGIAYYISPPQSFAEIIYDPFHAVFYLVFILTACALFSKTWIEVSGASAR 473          
BLAST of mRNA_S-dermatodea_contig1025.183.1 vs. uniprot
Match: B5YLQ8_THAPS (Protein translocase complex subunit n=5 Tax=Bacillariophyta TaxID=2836 RepID=B5YLQ8_THAPS)

HSP 1 Score: 192 bits (488), Expect = 5.230e-57
Identity = 92/121 (76.03%), Postives = 109/121 (90.08%), Query Frame = 0
Query:    3 VKYQKYRGQQGTYPIKLFYTSNMPVILQTALVSNLYFLSQLLHNRYAGNLLVRLMGRWAEVEGMPGTSVPVGGLAYYISPPTTMAEILKDPVHAVIYITFILTACALFSKTWIEVSGSSAK 123
            VKYQKYRGQ+GTYPIKLFYTSNMP+ILQTALVSNLYF+SQLL+NR   N+LVR++G+W +VEG  G ++PVGG+AYYISPPT+ AEI+ DP HAV Y+ FILTACALFSKTWIEVSG+SA+
Sbjct:  266 VKYQKYRGQEGTYPIKLFYTSNMPIILQTALVSNLYFVSQLLYNRAPTNILVRILGKWQDVEG-GGQTIPVGGIAYYISPPTSFAEIIYDPFHAVFYLVFILTACALFSKTWIEVSGASAR 385          
BLAST of mRNA_S-dermatodea_contig1025.183.1 vs. uniprot
Match: A0A067BTU3_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BTU3_SAPPC)

HSP 1 Score: 187 bits (476), Expect = 7.380e-57
Identity = 88/121 (72.73%), Postives = 107/121 (88.43%), Query Frame = 0
Query:    3 VKYQKYRGQQGTYPIKLFYTSNMPVILQTALVSNLYFLSQLLHNRYAGNLLVRLMGRWAEVEGMPGTSVPVGGLAYYISPPTTMAEILKDPVHAVIYITFILTACALFSKTWIEVSGSSAK 123
            VKYQ+YRGQQGTYPIKLFYTSNMP+ILQTALVSNLYF+SQLL+ ++ GN LV L+G+W +VEG  G S+PVGGLAYY+S P++ A+IL DP+ AVIY+ FIL +CALFSKTWIE+SGSSA+
Sbjct:  121 VKYQRYRGQQGTYPIKLFYTSNMPIILQTALVSNLYFVSQLLYKKFGGNFLVGLLGKWQDVEGGGGQSIPVGGLAYYMSAPSSAAQILYDPIRAVIYVAFILGSCALFSKTWIEISGSSAR 241          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1025.183.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L214_9PHAE1.370e-76100.00Plug_translocon domain-containing protein n=3 Tax=... [more]
A0A7S2XXJ1_9STRA2.590e-6484.30Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6V2TM26_HETAK1.130e-6282.64Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A4D9D8Z0_9STRA1.250e-6180.99Plug_translocon domain-containing protein n=2 Tax=... [more]
A0A6U0GBK2_9STRA1.170e-5976.86Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A1J3JXC7_NOCCA7.930e-5974.59Protein transport protein Sec61 subunit alpha isof... [more]
A0A482RU87_9ARCH2.340e-5877.69Preprotein translocase subunit SecY n=2 Tax=cellul... [more]
B7GD39_PHATC3.720e-5776.03Transport protein Sec61 alpha subunit n=7 Tax=Baci... [more]
B5YLQ8_THAPS5.230e-5776.03Protein translocase complex subunit n=5 Tax=Bacill... [more]
A0A067BTU3_SAPPC7.380e-5772.73Uncharacterized protein n=1 Tax=Saprolegnia parasi... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023201SecY domain superfamilyGENE3D1.10.3370.10coord: 1..123
e-value: 1.3E-39
score: 138.1
IPR023201SecY domain superfamilySUPERFAMILY103491Preprotein translocase SecY subunitcoord: 3..122
IPR002208SecY/SEC61-alpha familyPFAMPF00344SecYcoord: 3..120
e-value: 1.4E-11
score: 44.2
IPR002208SecY/SEC61-alpha familyPANTHERPTHR10906SECY/SEC61-ALPHA FAMILY MEMBERcoord: 2..123
NoneNo IPR availablePANTHERPTHR10906:SF1DSEC61ALPHAcoord: 2..123
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 96..115
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..40
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 41..95
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 116..123
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availableTMHMMTMhelixcoord: 93..115
NoneNo IPR availableTMHMMTMhelixcoord: 20..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1025contigS-dermatodea_contig1025:3580..4633 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1025.183.1mRNA_S-dermatodea_contig1025.183.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig1025 3580..4633 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig1025.183.1 ID=prot_S-dermatodea_contig1025.183.1|Name=mRNA_S-dermatodea_contig1025.183.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=123bp
MQVKYQKYRGQQGTYPIKLFYTSNMPVILQTALVSNLYFLSQLLHNRYAG
NLLVRLMGRWAEVEGMPGTSVPVGGLAYYISPPTTMAEILKDPVHAVIYI
TFILTACALFSKTWIEVSGSSAK
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023201SecY_dom_sf
IPR002208SecY/SEC61-alpha