mRNA_S-dermatodea_contig1025.183.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig1025.183.1 vs. uniprot
Match: A0A6H5L214_9PHAE (Plug_translocon domain-containing protein n=3 Tax=PX clade TaxID=569578 RepID=A0A6H5L214_9PHAE) HSP 1 Score: 243 bits (619), Expect = 1.370e-76 Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 1
Query: 7 VKYQKYRGQQGTYPIKLFYTSNMPVILQTALVSNLYFLSQLLHNRYAGNLLVRLMGRWAEVEGMPGTSVPVGGLAYYISPPTTMAEILKDPVHAVIYITFILTACALFSKTWIEVSGSSAK 369
VKYQKYRGQQGTYPIKLFYTSNMPVILQTALVSNLYFLSQLLHNRYAGNLLVRLMGRWAEVEGMPGTSVPVGGLAYYISPPTTMAEILKDPVHAVIYITFILTACALFSKTWIEVSGSSAK
Sbjct: 266 VKYQKYRGQQGTYPIKLFYTSNMPVILQTALVSNLYFLSQLLHNRYAGNLLVRLMGRWAEVEGMPGTSVPVGGLAYYISPPTTMAEILKDPVHAVIYITFILTACALFSKTWIEVSGSSAK 386
BLAST of mRNA_S-dermatodea_contig1025.183.1 vs. uniprot
Match: A0A7S2XXJ1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXJ1_9STRA) HSP 1 Score: 211 bits (537), Expect = 2.590e-64 Identity = 102/121 (84.30%), Postives = 111/121 (91.74%), Query Frame = 1
Query: 7 VKYQKYRGQQGTYPIKLFYTSNMPVILQTALVSNLYFLSQLLHNRYAGNLLVRLMGRWAEVEGMPGTSVPVGGLAYYISPPTTMAEILKDPVHAVIYITFILTACALFSKTWIEVSGSSAK 369
VKYQKYRGQQGTYPIKLFYTSNMP+ILQTALVSNLYFLSQLL+NRY+GN LV+L+GRW +VEGM G SVPVGGLAYYISPP + EIL DP HA+ YI+FILTACALFSKTWIEVSGSSAK
Sbjct: 266 VKYQKYRGQQGTYPIKLFYTSNMPIILQTALVSNLYFLSQLLYNRYSGNFLVKLLGRWQDVEGMSGQSVPVGGLAYYISPPNSFTEILADPFHALFYISFILTACALFSKTWIEVSGSSAK 386
BLAST of mRNA_S-dermatodea_contig1025.183.1 vs. uniprot
Match: A0A6V2TM26_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2TM26_HETAK) HSP 1 Score: 207 bits (526), Expect = 1.130e-62 Identity = 100/121 (82.64%), Postives = 109/121 (90.08%), Query Frame = 1
Query: 7 VKYQKYRGQQGTYPIKLFYTSNMPVILQTALVSNLYFLSQLLHNRYAGNLLVRLMGRWAEVEGMPGTSVPVGGLAYYISPPTTMAEILKDPVHAVIYITFILTACALFSKTWIEVSGSSAK 369
VKYQKYRGQQGTYPIKLFYTSNMP+ILQTALVSNLYFLSQLL NRY+GN LVRL+GRW E+EG G SVPVGG+AYYISPP ++ IL DP+HA+ Y TFILTACALFSKTWIEVSGSSAK
Sbjct: 266 VKYQKYRGQQGTYPIKLFYTSNMPIILQTALVSNLYFLSQLLWNRYSGNFLVRLLGRWQELEGGAGQSVPVGGMAYYISPPQSLGNILTDPLHAIFYFTFILTACALFSKTWIEVSGSSAK 386
BLAST of mRNA_S-dermatodea_contig1025.183.1 vs. uniprot
Match: A0A4D9D8Z0_9STRA (Plug_translocon domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D8Z0_9STRA) HSP 1 Score: 204 bits (519), Expect = 1.250e-61 Identity = 98/121 (80.99%), Postives = 109/121 (90.08%), Query Frame = 1
Query: 7 VKYQKYRGQQGTYPIKLFYTSNMPVILQTALVSNLYFLSQLLHNRYAGNLLVRLMGRWAEVEGMPGTSVPVGGLAYYISPPTTMAEILKDPVHAVIYITFILTACALFSKTWIEVSGSSAK 369
VK Q+YRGQQGTYPIKLFYTSNMP+ILQTALVSNLYFLSQLLH R++GN+LVRL+GRW EVEG G SVPVGG+AYYISPP +M EIL DP HAV Y+ FIL++CALFSKTWIEVSGSSAK
Sbjct: 268 VKSQRYRGQQGTYPIKLFYTSNMPIILQTALVSNLYFLSQLLHKRFSGNILVRLLGRWQEVEGQQGQSVPVGGIAYYISPPHSMTEILSDPFHAVFYLAFILSSCALFSKTWIEVSGSSAK 388
BLAST of mRNA_S-dermatodea_contig1025.183.1 vs. uniprot
Match: A0A6U0GBK2_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A6U0GBK2_9STRA) HSP 1 Score: 191 bits (485), Expect = 1.170e-59 Identity = 93/121 (76.86%), Postives = 108/121 (89.26%), Query Frame = 1
Query: 7 VKYQKYRGQQGTYPIKLFYTSNMPVILQTALVSNLYFLSQLLHNRYAGNLLVRLMGRWAEVEGMPGTSVPVGGLAYYISPPTTMAEILKDPVHAVIYITFILTACALFSKTWIEVSGSSAK 369
VKYQKYRGQQGTYPIKLFYTSNMP+ILQTALVSNLYF+SQLL+NR N+LVRL+G+W +VEG G ++PVGG+AYYISPP + AEI+ DP HAV Y+ FILTACALFSKTWIEVSG+SA+
Sbjct: 1 VKYQKYRGQQGTYPIKLFYTSNMPIILQTALVSNLYFVSQLLYNRAPTNVLVRLLGKWQDVEG-GGQTIPVGGIAYYISPPQSFAEIIYDPFHAVFYLIFILTACALFSKTWIEVSGASAR 120
BLAST of mRNA_S-dermatodea_contig1025.183.1 vs. uniprot
Match: A0A1J3JXC7_NOCCA (Protein transport protein Sec61 subunit alpha isoform 2 (Fragment) n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3JXC7_NOCCA) HSP 1 Score: 188 bits (478), Expect = 7.930e-59 Identity = 91/122 (74.59%), Postives = 107/122 (87.70%), Query Frame = 1
Query: 7 VKYQKYRGQQGTYPIKLFYTSNMPVILQTALVSNLYFLSQLLHNRYAGNLLVRLMGRWAEVEGMPGT-SVPVGGLAYYISPPTTMAEILKDPVHAVIYITFILTACALFSKTWIEVSGSSAK 369
VKYQKYRGQQG+YPIKLFYTSN+P+ILQTALVSNLYF SQLL+ RY+ N+LV+L+GRW E +G GT SVPVGGLAYY+SPP ++AEI+ DP HA+ Y +FIL ACALFSKTWIEVSGSS +
Sbjct: 64 VKYQKYRGQQGSYPIKLFYTSNIPIILQTALVSNLYFFSQLLYKRYSTNVLVQLLGRWQETDGAGGTTSVPVGGLAYYVSPPQSLAEIVYDPFHAIFYFSFILIACALFSKTWIEVSGSSPR 185
BLAST of mRNA_S-dermatodea_contig1025.183.1 vs. uniprot
Match: A0A482RU87_9ARCH (Preprotein translocase subunit SecY n=2 Tax=cellular organisms TaxID=131567 RepID=A0A482RU87_9ARCH) HSP 1 Score: 194 bits (492), Expect = 2.340e-58 Identity = 94/121 (77.69%), Postives = 105/121 (86.78%), Query Frame = 1
Query: 7 VKYQKYRGQQGTYPIKLFYTSNMPVILQTALVSNLYFLSQLLHNRYAGNLLVRLMGRWAEVEGMPGTSVPVGGLAYYISPPTTMAEILKDPVHAVIYITFILTACALFSKTWIEVSGSSAK 369
VKY K RGQQG YPIKLFYTSNMP+ILQTALVSNLYFLSQLL+NRY GN+LVRL+G W E++ PG SVPV GLAYYISPP T+A I KDP+H+VIY+ FIL +CALFSKTWIEVSGSS K
Sbjct: 193 VKYAKSRGQQGKYPIKLFYTSNMPIILQTALVSNLYFLSQLLYNRYGGNILVRLLGVWKELKDNPGNSVPVSGLAYYISPPQTLANIAKDPLHSVIYLAFILASCALFSKTWIEVSGSSPK 313
BLAST of mRNA_S-dermatodea_contig1025.183.1 vs. uniprot
Match: B7GD39_PHATC (Transport protein Sec61 alpha subunit n=7 Tax=Bacillariophycidae TaxID=33850 RepID=B7GD39_PHATC) HSP 1 Score: 194 bits (494), Expect = 3.720e-57 Identity = 92/121 (76.03%), Postives = 106/121 (87.60%), Query Frame = 1
Query: 7 VKYQKYRGQQGTYPIKLFYTSNMPVILQTALVSNLYFLSQLLHNRYAGNLLVRLMGRWAEVEGMPGTSVPVGGLAYYISPPTTMAEILKDPVHAVIYITFILTACALFSKTWIEVSGSSAK 369
VKYQKYRGQ+G YPIKLFYTSNMP+ILQTALVSNLYF+SQLL+NR N+LVRL+G+W EVEG G +PVGG+AYYISPP + AEI+ DP HAV Y+ FILTACALFSKTWIEVSG+SA+
Sbjct: 353 VKYQKYRGQEGNYPIKLFYTSNMPIILQTALVSNLYFVSQLLYNRAPTNILVRLLGKWQEVEGSAGNKIPVGGIAYYISPPQSFAEIIYDPFHAVFYLVFILTACALFSKTWIEVSGASAR 473
BLAST of mRNA_S-dermatodea_contig1025.183.1 vs. uniprot
Match: B5YLQ8_THAPS (Protein translocase complex subunit n=5 Tax=Bacillariophyta TaxID=2836 RepID=B5YLQ8_THAPS) HSP 1 Score: 192 bits (488), Expect = 5.230e-57 Identity = 92/121 (76.03%), Postives = 109/121 (90.08%), Query Frame = 1
Query: 7 VKYQKYRGQQGTYPIKLFYTSNMPVILQTALVSNLYFLSQLLHNRYAGNLLVRLMGRWAEVEGMPGTSVPVGGLAYYISPPTTMAEILKDPVHAVIYITFILTACALFSKTWIEVSGSSAK 369
VKYQKYRGQ+GTYPIKLFYTSNMP+ILQTALVSNLYF+SQLL+NR N+LVR++G+W +VEG G ++PVGG+AYYISPPT+ AEI+ DP HAV Y+ FILTACALFSKTWIEVSG+SA+
Sbjct: 266 VKYQKYRGQEGTYPIKLFYTSNMPIILQTALVSNLYFVSQLLYNRAPTNILVRILGKWQDVEG-GGQTIPVGGIAYYISPPTSFAEIIYDPFHAVFYLVFILTACALFSKTWIEVSGASAR 385
BLAST of mRNA_S-dermatodea_contig1025.183.1 vs. uniprot
Match: A0A067BTU3_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BTU3_SAPPC) HSP 1 Score: 187 bits (476), Expect = 7.380e-57 Identity = 88/121 (72.73%), Postives = 107/121 (88.43%), Query Frame = 1
Query: 7 VKYQKYRGQQGTYPIKLFYTSNMPVILQTALVSNLYFLSQLLHNRYAGNLLVRLMGRWAEVEGMPGTSVPVGGLAYYISPPTTMAEILKDPVHAVIYITFILTACALFSKTWIEVSGSSAK 369
VKYQ+YRGQQGTYPIKLFYTSNMP+ILQTALVSNLYF+SQLL+ ++ GN LV L+G+W +VEG G S+PVGGLAYY+S P++ A+IL DP+ AVIY+ FIL +CALFSKTWIE+SGSSA+
Sbjct: 121 VKYQRYRGQQGTYPIKLFYTSNMPIILQTALVSNLYFVSQLLYKKFGGNFLVGLLGKWQDVEGGGGQSIPVGGLAYYMSAPSSAAQILYDPIRAVIYVAFILGSCALFSKTWIEISGSSAR 241 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1025.183.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig1025.183.1 >prot_S-dermatodea_contig1025.183.1 ID=prot_S-dermatodea_contig1025.183.1|Name=mRNA_S-dermatodea_contig1025.183.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=123bp MQVKYQKYRGQQGTYPIKLFYTSNMPVILQTALVSNLYFLSQLLHNRYAGback to top mRNA from alignment at S-dermatodea_contig1025:3580..4633- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig1025.183.1 ID=mRNA_S-dermatodea_contig1025.183.1|Name=mRNA_S-dermatodea_contig1025.183.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1054bp|location=Sequence derived from alignment at S-dermatodea_contig1025:3580..4633- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig1025:3580..4633- >mRNA_S-dermatodea_contig1025.183.1 ID=mRNA_S-dermatodea_contig1025.183.1|Name=mRNA_S-dermatodea_contig1025.183.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=738bp|location=Sequence derived from alignment at S-dermatodea_contig1025:3580..4633- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |