prot_S-dermatodea_contig10249.181.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig10249.181.1
Unique Nameprot_S-dermatodea_contig10249.181.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length194
Homology
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BLAST of mRNA_S-dermatodea_contig10249.181.1 vs. uniprot
Match: A0A6H5KQ27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ27_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 8.890e-9
Identity = 47/137 (34.31%), Postives = 67/137 (48.91%), Query Frame = 0 
Query:   16 YAAFARMDQERQKVKFLALVREARKRM-------PLAEGCSGVGNHGHKGGGGKSFGASGGGGFPADESAFCQL----------------NPASEVASLIQEFEGKLTRSVDDNAQLRDFCAHLEGLLAVHQGKSGG 129
            +A +AR+ QE+Q+ + L LVR+AR++M           GC                     GG PA                        NP++EVASLI++F+ KL+RS+++N QLR FC+HLEGLLA +   S G
Sbjct:  500 FAHYARVGQEKQEAEILRLVRDAREKMVSGXXXXXXXXGC---------------------GGKPASXXXXXXXXXXXXXXXXXXGCGTSNPSTEVASLIRQFDEKLSRSLEENTQLRVFCSHLEGLLASNPAPSTG 615
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10249.181.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KQ27_9PHAE8.890e-934.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10249contigS-dermatodea_contig10249:1193..2401 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10249.181.1mRNA_S-dermatodea_contig10249.181.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig10249 1167..2450 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig10249.181.1 ID=prot_S-dermatodea_contig10249.181.1|Name=mRNA_S-dermatodea_contig10249.181.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=194bp
MPDPPARSEQFDSETYAAFARMDQERQKVKFLALVREARKRMPLAEGCSG
VGNHGHKGGGGKSFGASGGGGFPADESAFCQLNPASEVASLIQEFEGKLT
RSVDDNAQLRDFCAHLEGLLAVHQGKSGGEDPPAFVVGSCLGGFVPSPAG
ARGSKLSKAAGGNGKHSTNPLAVCREPFGDRRMRVSFPGSAQD*
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