prot_S-dermatodea_contig10248.180.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig10248.180.1
Unique Nameprot_S-dermatodea_contig10248.180.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length54
Homology
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BLAST of mRNA_S-dermatodea_contig10248.180.1 vs. uniprot
Match: D7G4Q5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Q5_ECTSI)

HSP 1 Score: 83.2 bits (204), Expect = 4.520e-20
Identity = 37/53 (69.81%), Postives = 49/53 (92.45%), Query Frame = 0 
Query:    1 MGSLSDAVGMGKLPVSIQYVVVGLVVAHVVAFAYWILRITTDRKKLEMRFKEE 53
            M ++++A+G+G LPV IQY V+GLVVAHV+AF+YW+LRITTD+K+LEMRFKEE
Sbjct:    1 MTAIANALGLGNLPVGIQYAVIGLVVAHVLAFSYWLLRITTDKKRLEMRFKEE 53
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10248.180.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G4Q5_ECTSI4.520e-2069.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 38..53
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 16..37
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..15
NoneNo IPR availableTMHMMTMhelixcoord: 15..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10248contigS-dermatodea_contig10248:3976..4631 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10248.180.1mRNA_S-dermatodea_contig10248.180.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig10248 3976..4631 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig10248.180.1 ID=prot_S-dermatodea_contig10248.180.1|Name=mRNA_S-dermatodea_contig10248.180.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=54bp
MGSLSDAVGMGKLPVSIQYVVVGLVVAHVVAFAYWILRITTDRKKLEMRF
KEE*
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