prot_S-dermatodea_contig10212.155.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig10212.155.1
Unique Nameprot_S-dermatodea_contig10212.155.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length161
Homology
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BLAST of mRNA_S-dermatodea_contig10212.155.1 vs. uniprot
Match: D8LG26_ECTSI (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG26_ECTSI)

HSP 1 Score: 147 bits (372), Expect = 2.550e-38
Identity = 81/154 (52.60%), Postives = 100/154 (64.94%), Query Frame = 0 
Query:   11 SILGYIRKASRTFTNNPFGSAGHNSGAHGSPASPHH----SSLGHGPVTLAARGKLTEEDEAMLSDSEADYDAFDSISEGTRKKLLSPNLRFLRWYATYMLVALLVFVCYMPVRVGFFSTEKGTWSKIDFLWNILFIGDMILRLNTGFVNNDTG 160
            S+L   RKAS +F++N   S  H           HH    S L      + ARGKLTE DEAMLSDSEADYDAFD+ SE   KKL SPN RFLRWYAT+MLVALL FV Y P+R+ FF +E+G W  ID +W+++F  D+++ LNTGFV+   G
Sbjct:  158 SMLAMFRKASHSFSSNSAMSRSHRG---------HHQRNTSDLQGLQRRMPARGKLTEADEAMLSDSEADYDAFDNNSERVDKKLFSPNFRFLRWYATFMLVALLTFVFYNPIRIAFFPSERGAWYGIDLVWHLVFAIDVLVHLNTGFVDGTDG 302
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BLAST of mRNA_S-dermatodea_contig10212.155.1 vs. uniprot
Match: A0A6H5J6P9_9PHAE (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6P9_9PHAE)

HSP 1 Score: 129 bits (323), Expect = 1.220e-31
Identity = 59/92 (64.13%), Postives = 71/92 (77.17%), Query Frame = 0 
Query:   69 MLSDSEADYDAFDSISEGTRKKLLSPNLRFLRWYATYMLVALLVFVCYMPVRVGFFSTEKGTWSKIDFLWNILFIGDMILRLNTGFVNNDTG 160
            MLSDSEADYDAFD+ SE    KL SPN RFLRWYAT+MLVALL FV YMP+R+ FF +E+G W  ID  W++LF  D+++ LNTGFV+  TG
Sbjct:    1 MLSDSEADYDAFDNDSERVGTKLFSPNFRFLRWYATFMLVALLTFVFYMPIRIAFFPSERGAWFGIDLAWHVLFAIDVLVHLNTGFVDGTTG 92
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10212.155.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LG26_ECTSI2.550e-3852.60Cyclic nucleotide-binding domain-containing protei... [more]
A0A6H5J6P9_9PHAE1.220e-3164.13Cyclic nucleotide-binding domain-containing protei... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..97
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 98..119
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 120..161
NoneNo IPR availableTMHMMTMhelixcoord: 101..123
NoneNo IPR availableTMHMMTMhelixcoord: 136..155

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10212contigS-dermatodea_contig10212:2084..4445 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10212.155.1mRNA_S-dermatodea_contig10212.155.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig10212 2084..4447 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig10212.155.1 ID=prot_S-dermatodea_contig10212.155.1|Name=mRNA_S-dermatodea_contig10212.155.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=161bp
LSSSDGHRQNSILGYIRKASRTFTNNPFGSAGHNSGAHGSPASPHHSSLG
HGPVTLAARGKLTEEDEAMLSDSEADYDAFDSISEGTRKKLLSPNLRFLR
WYATYMLVALLVFVCYMPVRVGFFSTEKGTWSKIDFLWNILFIGDMILRL
NTGFVNNDTGI
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