prot_S-dermatodea_contig10200.147.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig10200.147.1
Unique Nameprot_S-dermatodea_contig10200.147.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length252
Homology
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BLAST of mRNA_S-dermatodea_contig10200.147.1 vs. uniprot
Match: D8LJJ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJJ6_ECTSI)

HSP 1 Score: 321 bits (822), Expect = 9.780e-101
Identity = 168/252 (66.67%), Postives = 196/252 (77.78%), Query Frame = 0 
Query:    1 VRSILGKSPGERTSREISYIARNVLSHHVAFQQMPLLTLERIASRLTDMVGSRGGEVLVAHEESVTGFLLLLTGSASIVSSSKVIRCPLKLVRAAEKRDCVDRCVSARAMKSLAVPPELRKRWDVRNIVAEMSTPKSALDVAGFRDIPASLKTRVAAALRLEVWPPFRELLRDDDCASTYFVIVKGSISLQAVAKSQRFTMEPIDIPENSHLKNLDVDNGLALEEWKASGLGPCAAILCERQVLGEYPNSEQ 252
            VR  L K+PG RT REISYIARNVLSHHVAFQQM  L+LERIASRLT+     GGEVLV H + VTGFL+LL GSA I+  SKVIR  ++LVRAAEK+   +  V  RA++SLAVPPE R R DV+NIV E+STPK  LD+A FR +PA LKTR+AAALRLEVWP F EL+RD+    TY  IVKGSISLQAV  + RFT+E +DIP   HLKN DVDN L+LE+W+ASGLGPCAA+  +RQVLGEYPNSE+
Sbjct:   46 VRRTLAKTPGLRTWREISYIARNVLSHHVAFQQMAALSLERIASRLTNRTVVAGGEVLVEHGKKVTGFLILLRGSARIMEVSKVIRGDVELVRAAEKQAGGEHPVGTRALRSLAVPPERRTRRDVKNIVNELSTPKGGLDIARFRHVPACLKTRIAAALRLEVWPAFSELIRDEKDPKTYLFIVKGSISLQAVTNANRFTVETLDIPAAGHLKNFDVDNALSLEDWRASGLGPCAAMHFDRQVLGEYPNSEE 297
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BLAST of mRNA_S-dermatodea_contig10200.147.1 vs. uniprot
Match: A0A6H5KBT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBT9_9PHAE)

HSP 1 Score: 272 bits (695), Expect = 9.630e-83
Identity = 142/219 (64.84%), Postives = 169/219 (77.17%), Query Frame = 0 
Query:   34 MPLLTLERIASRLTDMVGSRGGEVLVAHEESVTGFLLLLTGSASIVSSSKVIRCPLKLVRAAEKRDCVDRCVSARAMKSLAVPPELRKRWDVRNIVAEMSTPKSALDVAGFRDIPASLKTRVAAALRLEVWPPFRELLRDDDCASTYFVIVKGSISLQAVAKSQRFTMEPIDIPENSHLKNLDVDNGLALEEWKASGLGPCAAILCERQVLGEYPNSEQ 252
            M  L+LERIASRLT+     GGEVL+ H + VTGFL+LL GSA I+  SK IR  ++LVRAAEKR   +  V ARAM+SLAVPPE R + DV+NIV EMSTPK  LD+A FR IPA LKTR+AAALRLEVWP F EL+R +    TY  IVKGS+SLQAV K+ RFT+E +DIP   HLK+LDVDN L+LE+W+ASGLGPCAA+  +RQVLGEYPNSE+
Sbjct:    1 MAALSLERIASRLTNRTVVAGGEVLIEHGKKVTGFLILLRGSARIMEVSKAIRGDVELVRAAEKRASGEHPVGARAMRSLAVPPERRTQRDVKNIVNEMSTPKGGLDIARFRHIPACLKTRLAAALRLEVWPAFSELIRHEKDPKTYLFIVKGSVSLQAVTKANRFTVETLDIPAAGHLKSLDVDNALSLEDWRASGLGPCAAMHFDRQVLGEYPNSEE 219
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10200.147.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LJJ6_ECTSI9.780e-10166.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KBT9_9PHAE9.630e-8364.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014710RmlC-like jelly roll foldGENE3D2.60.120.10coord: 1..102
e-value: 2.5E-7
score: 32.2
IPR000595Cyclic nucleotide-binding domainPROSITEPS50042CNMP_BINDING_3coord: 143..190
score: 7.305

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10200contigS-dermatodea_contig10200:1709..7828 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10200.147.1mRNA_S-dermatodea_contig10200.147.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig10200 1709..7828 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig10200.147.1 ID=prot_S-dermatodea_contig10200.147.1|Name=mRNA_S-dermatodea_contig10200.147.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=252bp
VRSILGKSPGERTSREISYIARNVLSHHVAFQQMPLLTLERIASRLTDMV
GSRGGEVLVAHEESVTGFLLLLTGSASIVSSSKVIRCPLKLVRAAEKRDC
VDRCVSARAMKSLAVPPELRKRWDVRNIVAEMSTPKSALDVAGFRDIPAS
LKTRVAAALRLEVWPPFRELLRDDDCASTYFVIVKGSISLQAVAKSQRFT
MEPIDIPENSHLKNLDVDNGLALEEWKASGLGPCAAILCERQVLGEYPNS
EQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014710RmlC-like_jellyroll
IPR000595cNMP-bd_dom