prot_S-dermatodea_contig10186.137.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig10186.137.1
Unique Nameprot_S-dermatodea_contig10186.137.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length78
Homology
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BLAST of mRNA_S-dermatodea_contig10186.137.1 vs. uniprot
Match: A0A6H5L351_9PHAE (DNMT1-RFD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L351_9PHAE)

HSP 1 Score: 122 bits (305), Expect = 1.630e-30
Identity = 59/64 (92.19%), Postives = 62/64 (96.88%), Query Frame = 0 
Query:   15 AGCNDPLEMVRQMGSEEYARWSPAARSRALAWLCDEALSAATMNDLVKKVLESREVVDRKDREV 78
            AGCNDPLEMVRQMGSEEY RWSPAARSRALAWLCDEALSAATMNDLVKKV E++EVVDRKDRE+
Sbjct: 1453 AGCNDPLEMVRQMGSEEYKRWSPAARSRALAWLCDEALSAATMNDLVKKVQEAKEVVDRKDREI 1516
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BLAST of mRNA_S-dermatodea_contig10186.137.1 vs. uniprot
Match: D7G6R7_ECTSI (Bromo domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6R7_ECTSI)

HSP 1 Score: 119 bits (298), Expect = 1.440e-29
Identity = 57/63 (90.48%), Postives = 61/63 (96.83%), Query Frame = 0 
Query:   16 GCNDPLEMVRQMGSEEYARWSPAARSRALAWLCDEALSAATMNDLVKKVLESREVVDRKDREV 78
            GCNDPLEMVRQMGSEEY RWSPAARSRALAWLCDEALSAATMNDLVK+V E++EVVDRKDRE+
Sbjct:  997 GCNDPLEMVRQMGSEEYRRWSPAARSRALAWLCDEALSAATMNDLVKRVQEAKEVVDRKDREI 1059
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10186.137.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L351_9PHAE1.630e-3092.19DNMT1-RFD domain-containing protein n=1 Tax=Ectoca... [more]
D7G6R7_ECTSI1.440e-2990.48Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10186contigS-dermatodea_contig10186:1407..1640 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10186.137.1mRNA_S-dermatodea_contig10186.137.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig10186 1407..1641 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig10186.137.1 ID=prot_S-dermatodea_contig10186.137.1|Name=mRNA_S-dermatodea_contig10186.137.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=78bp
DHPSTLFGGTADDGAGCNDPLEMVRQMGSEEYARWSPAARSRALAWLCDE
ALSAATMNDLVKKVLESREVVDRKDREV
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