prot_S-dermatodea_contig10168.125.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig10168.125.1
Unique Nameprot_S-dermatodea_contig10168.125.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length140
Homology
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BLAST of mRNA_S-dermatodea_contig10168.125.1 vs. uniprot
Match: A0A6H5L374_9PHAE (F-box domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L374_9PHAE)

HSP 1 Score: 202 bits (515), Expect = 3.010e-61
Identity = 93/140 (66.43%), Postives = 108/140 (77.14%), Query Frame = 0 
Query:    1 MGSMLLSREGLLREAGQLPPWTSSLRGWRWSFYYAKVDARRCWLTMDDLVRTRWTMNFPAQMPSPASPHLLPSVTCEFHRNFAYTDEGFHQDGLEWHFEDSHRCVKVSSYPALEAERDE-SWGWRLANAHVVFEQQRGQP 139
            MGSMLLSR+GLLR+ GQLP W S +RGWRWSF++A  DA+R W+TM+DL RT W M+FP  + S   P  L +V CEFHR+F YTD GFHQDGL WHFED+H  VKVS+YPALE ERDE SWGWRL NAHV F+Q R  P
Sbjct:  274 MGSMLLSRDGLLRQKGQLPAWLSRVRGWRWSFHFADKDAKRQWMTMEDLARTPWMMSFPGHVSSAVPPPPLLAVRCEFHRDFTYTDAGFHQDGLVWHFEDNHHFVKVSNYPALEVERDEKSWGWRLINAHVTFQQDRALP 413
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BLAST of mRNA_S-dermatodea_contig10168.125.1 vs. uniprot
Match: D8LLT4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLT4_ECTSI)

HSP 1 Score: 92.4 bits (228), Expect = 1.920e-21
Identity = 41/54 (75.93%), Postives = 46/54 (85.19%), Query Frame = 0 
Query:   87 EGFHQDGLEWHFEDSHRCVKVSSYPALEAERDE-SWGWRLANAHVVFEQQRGQP 139
            +GFHQDGL WHFED+HR VKVS+YPALE ERDE SWGWRL NAHV F+Q+R  P
Sbjct:   73 DGFHQDGLVWHFEDNHRFVKVSNYPALEVERDEKSWGWRLVNAHVTFKQERAVP 126
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10168.125.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L374_9PHAE3.010e-6166.43F-box domain-containing protein n=1 Tax=Ectocarpus... [more]
D8LLT4_ECTSI1.920e-2175.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10168contigS-dermatodea_contig10168:590..4797 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10168.125.1mRNA_S-dermatodea_contig10168.125.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig10168 567..6072 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig10168.125.1 ID=prot_S-dermatodea_contig10168.125.1|Name=mRNA_S-dermatodea_contig10168.125.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=140bp
MGSMLLSREGLLREAGQLPPWTSSLRGWRWSFYYAKVDARRCWLTMDDLV
RTRWTMNFPAQMPSPASPHLLPSVTCEFHRNFAYTDEGFHQDGLEWHFED
SHRCVKVSSYPALEAERDESWGWRLANAHVVFEQQRGQP*
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