prot_S-dermatodea_contig10167.124.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig10167.124.1
Unique Nameprot_S-dermatodea_contig10167.124.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length167
Homology
BLAST of mRNA_S-dermatodea_contig10167.124.1 vs. uniprot
Match: D8LEZ8_ECTSI (Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEZ8_ECTSI)

HSP 1 Score: 238 bits (607), Expect = 5.050e-78
Identity = 128/160 (80.00%), Postives = 142/160 (88.75%), Query Frame = 0
Query:    3 SGAPIARSTTLAASMRSPDTSSPLRPSHRTDGKTKAKGSGGRTGRAGRGHITQSLRAGLTFPVSRVARHLKESKLSNRVGKGSAVYLAAVLEYLCAEILELAGNACRDNKKKRITPRHIQLAIRNDEELNKLLQGVTIAEGGVLPNIHAVLLPKKLARKV 162
            SGAPIARS+TLAAS+RS D+SSPLRP HR  GKT     GGR    G G I+QSLRAGLTFPV+RVARHLKE+KL++RVGKGSAVYLAA++EYLCAEILELAGNACRDNKKKRITPRHIQLAIRNDEELNKLL  VTIAEGGVLPNIH++LLPKK+A K+
Sbjct:    2 SGAPIARSSTLAASIRSSDSSSPLRPVHRNKGKTGGN-KGGRGRVKGSGSISQSLRAGLTFPVARVARHLKEAKLASRVGKGSAVYLAAIMEYLCAEILELAGNACRDNKKKRITPRHIQLAIRNDEELNKLLADVTIAEGGVLPNIHSILLPKKVAAKL 160          
BLAST of mRNA_S-dermatodea_contig10167.124.1 vs. uniprot
Match: A0A835ZBB6_9STRA (Histone H2A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBB6_9STRA)

HSP 1 Score: 173 bits (438), Expect = 8.650e-53
Identity = 90/127 (70.87%), Postives = 103/127 (81.10%), Query Frame = 0
Query:   39 KGSGGRTGRAGRGHITQSLRAGLTFPVSRVARHLKESKLSNRVGKGSAVYLAAVLEYLCAEILELAGNACRDNKKKRITPRHIQLAIRNDEELNKLLQGVTIAEGGVLPNIHAVLLPKKLARKVAEG 165
            KG GGR G  G+   +QS +AGL FPV+R+ R+LK+ + ++RVG G+ VYLAAVLEYLCAEILELAGNA RDNKK RI PRHIQLA+RNDEELN+LL  VTIA GGVLPNIHAVLLPKK A K A G
Sbjct:    4 KGKGGR-GAEGKKITSQSAKAGLQFPVARMGRYLKQGRYADRVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHIQLAVRNDEELNRLLGNVTIASGGVLPNIHAVLLPKKTAAKAAAG 129          
BLAST of mRNA_S-dermatodea_contig10167.124.1 vs. uniprot
Match: A0A7S3UYM8_HETAK (Histone H2A n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UYM8_HETAK)

HSP 1 Score: 172 bits (437), Expect = 3.080e-52
Identity = 99/153 (64.71%), Postives = 113/153 (73.86%), Query Frame = 0
Query:    9 RSTTLAASMRS--PDTSSPLRPSHRTDGKTKAKGSGGRTGRAGRGHITQSL--RAGLTFPVSRVARHLKESKLSNRVGKGSAVYLAAVLEYLCAEILELAGNACRDNKKKRITPRHIQLAIRNDEELNKLLQGVTIAEGGVLPNIHAVLLPKK 157
            R+TTLAAS R+   D  SPLRP  R         +GG+    GRG  +QS   +AGL FPV R+ R+LK  + S RVG G+ VYLAAVLEYLCAEILELAGNA RDNKK RI PRH+QLA+RNDEELNKLL GVTI++GGVLPNIH VLLPKK
Sbjct:    3 RATTLAASTRTGADDLKSPLRPKGRLS-------AGGKAAAGGRGKKSQSKSSKAGLQFPVGRIGRYLKNGRYSARVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTISQGGVLPNIHTVLLPKK 148          
BLAST of mRNA_S-dermatodea_contig10167.124.1 vs. uniprot
Match: A0A6V1MPN2_HETAK (Histone H2A n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1MPN2_HETAK)

HSP 1 Score: 170 bits (431), Expect = 2.360e-51
Identity = 95/159 (59.75%), Postives = 118/159 (74.21%), Query Frame = 0
Query:    9 RSTTLAASMRSPDTS--SPLRPSHRTDGKTKAKGSGGRTGRAGRGHITQSLRAGLTFPVSRVARHLKESKLSNRVGKGSAVYLAAVLEYLCAEILELAGNACRDNKKKRITPRHIQLAIRNDEELNKLLQGVTIAEGGVLPNIHAVLLPKKLARKVAEG 165
            R+TTLAAS +S  T   SPLRP        K++ +G +     +  +T+S++AGL FPV+RV+R+LK+ + S +VG G+ +YLAAV+EYL AE+LELAGNA RDNKKK I PRHI LAIRNDEELNKLL GVTIA GGVLPNIH+VLLPKK     A+G
Sbjct:    3 RATTLAASTKSGGTGEKSPLRP--------KSRVAGAKAXXXXKKSVTKSMKAGLQFPVARVSRYLKQGRYSKKVGVGAGIYLAAVMEYLSAEVLELAGNAARDNKKKTINPRHITLAIRNDEELNKLLGGVTIASGGVLPNIHSVLLPKKSKTVAAKG 153          
BLAST of mRNA_S-dermatodea_contig10167.124.1 vs. uniprot
Match: A0A7S2CIK1_9STRA (Histone H2A n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CIK1_9STRA)

HSP 1 Score: 168 bits (426), Expect = 6.550e-51
Identity = 90/128 (70.31%), Postives = 104/128 (81.25%), Query Frame = 0
Query:   39 KGSGGRTGRAGRGHITQSLRAGLTFPVSRVARHLKESKLSNRVGKGSAVYLAAVLEYLCAEILELAGNACRDNKKKRITPRHIQLAIRNDEELNKLLQGVTIAEGGVLPNIHAVLLPKKLAR-KVAEG 165
            KG  GR G+ G    ++S +AGL FPV+RV R+LK+ K + RVG G+ VYLAAVLEYLCAEILELAGNA RDNKK RITPRHIQLA+RNDEELNKLL  VTI+ GGVLPNIHAVLLPKK  + K+A+G
Sbjct:    4 KGKSGR-GKTGGKVTSKSSKAGLQFPVARVGRYLKKGKFATRVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKTRITPRHIQLAVRNDEELNKLLGNVTISSGGVLPNIHAVLLPKKTGKAKLAKG 130          
BLAST of mRNA_S-dermatodea_contig10167.124.1 vs. uniprot
Match: A0A0L0FI70_9EUKA (Histone H2A n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FI70_9EUKA)

HSP 1 Score: 168 bits (425), Expect = 8.720e-51
Identity = 86/125 (68.80%), Postives = 99/125 (79.20%), Query Frame = 0
Query:   39 KGSGGRTGRAGRGHITQSLRAGLTFPVSRVARHLKESKLSNRVGKGSAVYLAAVLEYLCAEILELAGNACRDNKKKRITPRHIQLAIRNDEELNKLLQGVTIAEGGVLPNIHAVLLPKKLARKVA 163
            KG GG+ G++     T+S RAGL FPV R+ RHL++   + RVG G+ VYLAAVLEYL AEILELAGNA RDNKK RI PRH+QLA+RNDEELNKLL GVTIA+GGVLPNIHAVLLPKK  +  A
Sbjct:    4 KGKGGKGGKSSGKSKTRSSRAGLQFPVGRIHRHLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKSRIIPRHLQLAVRNDEELNKLLSGVTIAQGGVLPNIHAVLLPKKSGKAKA 128          
BLAST of mRNA_S-dermatodea_contig10167.124.1 vs. uniprot
Match: A0A6U2JFS4_9STRA (Histone H2A n=6 Tax=Bacillariophyta TaxID=2836 RepID=A0A6U2JFS4_9STRA)

HSP 1 Score: 167 bits (423), Expect = 1.200e-50
Identity = 83/118 (70.34%), Postives = 96/118 (81.36%), Query Frame = 0
Query:   43 GRTGRAGRGHITQSLRAGLTFPVSRVARHLKESKLSNRVGKGSAVYLAAVLEYLCAEILELAGNACRDNKKKRITPRHIQLAIRNDEELNKLLQGVTIAEGGVLPNIHAVLLPKKLAR 160
            G+ GR G+   T S +AGL FPV R+ R+L++ K + R+G G+ VYLAAVLEYLCAEILELAGNA RDNKK RI PRHI LA++NDEELNKLL GVTIA GGVLPNIHAVLLPKK A+
Sbjct:    5 GKGGRGGKKSTTSSAKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHITLAVKNDEELNKLLGGVTIASGGVLPNIHAVLLPKKSAK 122          
BLAST of mRNA_S-dermatodea_contig10167.124.1 vs. uniprot
Match: A0A3P8XRI8_ESOLU (Histone H2A n=1 Tax=Esox lucius TaxID=8010 RepID=A0A3P8XRI8_ESOLU)

HSP 1 Score: 167 bits (422), Expect = 2.740e-50
Identity = 81/104 (77.88%), Postives = 92/104 (88.46%), Query Frame = 0
Query:   54 TQSLRAGLTFPVSRVARHLKESKLSNRVGKGSAVYLAAVLEYLCAEILELAGNACRDNKKKRITPRHIQLAIRNDEELNKLLQGVTIAEGGVLPNIHAVLLPKK 157
            ++S RAGL FPVSR+ARHLK+   +NR+G G+AVYLAA+LEYLCAE+LELAGNA RDNKK RI PRHIQLA+RNDEELN LL GVTI+EGGVLPNIHA LLPKK
Sbjct:   16 SRSSRAGLQFPVSRIARHLKKGHYANRIGVGAAVYLAAILEYLCAEVLELAGNASRDNKKARIAPRHIQLAVRNDEELNTLLGGVTISEGGVLPNIHATLLPKK 119          
BLAST of mRNA_S-dermatodea_contig10167.124.1 vs. uniprot
Match: A0A7J6EZX2_CANSA (Histone H2A n=7 Tax=Cannabis sativa TaxID=3483 RepID=A0A7J6EZX2_CANSA)

HSP 1 Score: 166 bits (421), Expect = 4.700e-50
Identity = 85/128 (66.41%), Postives = 102/128 (79.69%), Query Frame = 0
Query:   39 KGSGGRTGRAGRGHITQSLRAGLTFPVSRVARHLKESKLSNRVGKGSAVYLAAVLEYLCAEILELAGNACRDNKKKRITPRHIQLAIRNDEELNKLLQGVTIAEGGVLPNIHAVLLPKKLARKVAEGE 166
            KG+GGR G   +  +T+S++AGL FPV R+AR+LK+ + + R G G+ VYLAAVLEYL AE+LELAGNA RDNKK RI PRH+QLA+RNDEEL KLLQG+TIA GGVLPNI+ VLLPKK   K AE E
Sbjct:    8 KGAGGRKGGDRKKSVTKSVKAGLQFPVGRIARYLKKGRYAQRTGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRINPRHVQLAVRNDEELGKLLQGITIASGGVLPNINPVLLPKK--GKAAESE 133          
BLAST of mRNA_S-dermatodea_contig10167.124.1 vs. uniprot
Match: A0A0D6QTA4_ARACU (Histone H2A n=2 Tax=Araucaria cunninghamii TaxID=56994 RepID=A0A0D6QTA4_ARACU)

HSP 1 Score: 166 bits (421), Expect = 5.160e-50
Identity = 84/128 (65.62%), Postives = 99/128 (77.34%), Query Frame = 0
Query:   39 KGSGGRTGRAGRGHITQSLRAGLTFPVSRVARHLKESKLSNRVGKGSAVYLAAVLEYLCAEILELAGNACRDNKKKRITPRHIQLAIRNDEELNKLLQGVTIAEGGVLPNIHAVLLPKKLARKVAEGE 166
            KG+ GR   A +  ++++ +AGL FPV R+AR+LK  + + RVG G+ VYLAAV+EYL AE+LELAGNA RDNKK RI PRHI LA+RNDEEL KLL GVTIA GGVLPNIH VLLPKK A K A GE
Sbjct:   10 KGAAGRKXXAKKKSVSKTTKAGLQFPVGRLARYLKRGRYAKRVGSGAPVYLAAVMEYLAAEVLELAGNAARDNKKNRIIPRHILLAVRNDEELGKLLMGVTIAHGGVLPNIHQVLLPKKTAEKAASGE 137          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10167.124.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEZ8_ECTSI5.050e-7880.00Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8... [more]
A0A835ZBB6_9STRA8.650e-5370.87Histone H2A n=1 Tax=Tribonema minus TaxID=303371 R... [more]
A0A7S3UYM8_HETAK3.080e-5264.71Histone H2A n=1 Tax=Heterosigma akashiwo TaxID=282... [more]
A0A6V1MPN2_HETAK2.360e-5159.75Histone H2A n=1 Tax=Heterosigma akashiwo TaxID=282... [more]
A0A7S2CIK1_9STRA6.550e-5170.31Histone H2A n=1 Tax=Dictyocha speculum TaxID=35687... [more]
A0A0L0FI70_9EUKA8.720e-5168.80Histone H2A n=1 Tax=Sphaeroforma arctica JP610 Tax... [more]
A0A6U2JFS4_9STRA1.200e-5070.34Histone H2A n=6 Tax=Bacillariophyta TaxID=2836 Rep... [more]
A0A3P8XRI8_ESOLU2.740e-5077.88Histone H2A n=1 Tax=Esox lucius TaxID=8010 RepID=A... [more]
A0A7J6EZX2_CANSA4.700e-5066.41Histone H2A n=7 Tax=Cannabis sativa TaxID=3483 Rep... [more]
A0A0D6QTA4_ARACU5.160e-5065.63Histone H2A n=2 Tax=Araucaria cunninghamii TaxID=5... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002119Histone H2APRINTSPR00620HISTONEH2Acoord: 109..123
score: 76.19
coord: 137..155
score: 77.39
coord: 95..108
score: 80.54
coord: 80..95
score: 75.95
coord: 51..73
score: 51.14
IPR002119Histone H2ASMARTSM00414h2a4coord: 40..160
e-value: 1.0E-67
score: 241.0
IPR032454Histone H2A, C-terminal domainPFAMPF16211Histone_H2A_Ccoord: 129..160
e-value: 7.7E-19
score: 67.1
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 26..126
e-value: 3.0E-16
score: 60.0
IPR009072Histone-foldGENE3D1.10.20.10coord: 38..165
e-value: 1.7E-55
score: 188.3
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 54..157
NoneNo IPR availablePANTHERPTHR23430:SF241coord: 24..163
NoneNo IPR availablePANTHERPTHR23430HISTONE H2Acoord: 24..163
IPR032458Histone H2A conserved sitePROSITEPS00046HISTONE_H2Acoord: 59..65

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10167contigS-dermatodea_contig10167:1344..4179 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10167.124.1mRNA_S-dermatodea_contig10167.124.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig10167 1293..4647 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig10167.124.1 ID=prot_S-dermatodea_contig10167.124.1|Name=mRNA_S-dermatodea_contig10167.124.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=167bp
MSSGAPIARSTTLAASMRSPDTSSPLRPSHRTDGKTKAKGSGGRTGRAGR
GHITQSLRAGLTFPVSRVARHLKESKLSNRVGKGSAVYLAAVLEYLCAEI
LELAGNACRDNKKKRITPRHIQLAIRNDEELNKLLQGVTIAEGGVLPNIH
AVLLPKKLARKVAEGE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002119Histone_H2A
IPR032454Histone_H2A_C
IPR007125Histone_H2A/H2B/H3
IPR009072Histone-fold
IPR032458Histone_H2A_CS