prot_S-dermatodea_contig10142.104.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig10142.104.1
Unique Nameprot_S-dermatodea_contig10142.104.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length164
Homology
BLAST of mRNA_S-dermatodea_contig10142.104.1 vs. uniprot
Match: D8LE00_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE00_ECTSI)

HSP 1 Score: 122 bits (307), Expect = 2.390e-32
Identity = 73/172 (42.44%), Postives = 92/172 (53.49%), Query Frame = 0
Query:    1 ELSRGVEATLIVPTLV-VGKKKRRVLLYTEDNGESISWMETGTGRPANPYKVSCNTLLEVKEKSLLGVGAXXXXXXXXXXXXXXXXXCGQPARGKGAXXXXXXXXXXXASRSGGVSD----------LRIKLRWRPKPTWSVRKVTIVDVRCARPGVFARGMMQLRDHNTDL 161
            +LSRGVEATL+ P    + KK+R V+LYTEDNGESI W++TG      PY++ C TLLEV++KS  G  A                  G+    +GA           A   GG S           +RI L+W P+PTWS R V +VDV+ A PG+F RGM QL   NTDL
Sbjct:   14 QLSRGVEATLVFPGFGGISKKRRPVILYTEDNGESICWIKTGANGSGEPYRIRCKTLLEVRDKSGAGSSAESPATVAGSG--------GELHEVEGAFGSEWGEQKEDAGGVGGTSSGYGTAAAAAGVRINLKWLPQPTWSRRTVKLVDVQTACPGMFTRGMQQLLSFNTDL 177          
BLAST of mRNA_S-dermatodea_contig10142.104.1 vs. uniprot
Match: A0A6H5KTP6_9PHAE (Ig-like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTP6_9PHAE)

HSP 1 Score: 119 bits (298), Expect = 2.280e-29
Identity = 84/166 (50.60%), Postives = 101/166 (60.84%), Query Frame = 0
Query:    1 ELSRGVEATLIVPTLV-VGKKKRRVLLYTEDNGESISWMETGTGRPANPYKVSCNTLLEVKEKSLLGVGAXXXXXXXXXXXXXXXXX---CG-QPARGKGAXXXXXXXXXXXASRSGGVSDLRIKLRWRPKPTWSVRKVTIVDVRCARPGVFARGMMQLRDHNTDL 161
            ELSRGVEATL+ P L  + KK+R V+LYTEDNGESI W++TG      PY++   TLLEVK+KS  G  A                    CG Q    +G XXXXXXXXXXX   + GV   RI L+W P+PTWS R V +VDV+ A PG+F RGM QL   N+DL
Sbjct:  181 ELSRGVEATLVFPGLGGISKKRRPVILYTEDNGESICWIKTGANGSGEPYRIRSKTLLEVKDKSGAGSRAESVARCGGGAHGVEGAFRSECGEQEEDARGXXXXXXXXXXXXXXXATGV---RINLKWLPQPTWSKRTVKLVDVQTACPGIFTRGMQQLLSFNSDL 343          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10142.104.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LE00_ECTSI2.390e-3242.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KTP6_9PHAE2.280e-2950.60Ig-like domain-containing protein n=1 Tax=Ectocarp... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10142contigS-dermatodea_contig10142:5394..6107 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10142.104.1mRNA_S-dermatodea_contig10142.104.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig10142 5394..6107 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig10142.104.1 ID=prot_S-dermatodea_contig10142.104.1|Name=mRNA_S-dermatodea_contig10142.104.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=164bp
ELSRGVEATLIVPTLVVGKKKRRVLLYTEDNGESISWMETGTGRPANPYK
VSCNTLLEVKEKSLLGVGAAAASSAAAAAAAAAGGGCGQPARGKGAGGAG
QTDSGDGASRSGGVSDLRIKLRWRPKPTWSVRKVTIVDVRCARPGVFARG
MMQLRDHNTDLML*
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