prot_S-dermatodea_contig1014.99.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig1014.99.1
Unique Nameprot_S-dermatodea_contig1014.99.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length278
Homology
BLAST of mRNA_S-dermatodea_contig1014.99.1 vs. uniprot
Match: A0A6H5L0V0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0V0_9PHAE)

HSP 1 Score: 321 bits (823), Expect = 1.870e-107
Identity = 179/264 (67.80%), Postives = 189/264 (71.59%), Query Frame = 0
Query:    7 RAAVAFILLASWSSQPCLGFVGTACSLSAQTRGRYASTLAAPSRSSSTLSARRAGSGCYGAGFRRRRASPASVTSMVAAPTELWDSYLGALEAAPLLTKSITAGVIFPAADATAQFFDSARKASGE---GWDFARTLRWLFFGFVVQAPWNHLFYVVLDGALPPTLDPLSTTTAIKVFIDQFVQAPVFTIIIFGVLGLLEGKTTADIREQLDQDYKSTMLVNWGVFVPASVVNLAFCPPELRVLFLNVVFFGWTIFLSTIVSKG 267
            R   A  LLA WS Q C GFV   CS     R    S +          S RR+G                 VT M AAPTELWDSYL ALE APLLTKSITAG IFPAADA AQ FD+  +  GE     D ARTLRWLFFGF VQAPWNH FYV LDGALPPT DPLSTTTA+KV IDQFVQAP+FT++IFGVLGLLEGK  ADIREQLDQDYKSTML NWGVFVPA+VVNLAFCPPELRVLFLNVVFFGWTIFLST+VSKG
Sbjct:   24 RFITACTLLACWSCQRCSGFV---CS---PLRSALLSPVGMKQHKHDNRSIRRSG-----------------VTRMAAAPTELWDSYLHALETAPLLTKSITAGCIFPAADAVAQRFDTKGQDDGEVQQQLDIARTLRWLFFGFAVQAPWNHFFYVFLDGALPPTPDPLSTTTAVKVLIDQFVQAPIFTVVIFGVLGLLEGKAVADIREQLDQDYKSTMLANWGVFVPAAVVNLAFCPPELRVLFLNVVFFGWTIFLSTVVSKG 264          
BLAST of mRNA_S-dermatodea_contig1014.99.1 vs. uniprot
Match: D7FP55_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP55_ECTSI)

HSP 1 Score: 318 bits (814), Expect = 3.270e-107
Identity = 156/189 (82.54%), Postives = 168/189 (88.89%), Query Frame = 0
Query:   82 MVAAPTELWDSYLGALEAAPLLTKSITAGVIFPAADATAQFFDSARKASGE---GWDFARTLRWLFFGFVVQAPWNHLFYVVLDGALPPTLDPLSTTTAIKVFIDQFVQAPVFTIIIFGVLGLLEGKTTADIREQLDQDYKSTMLVNWGVFVPASVVNLAFCPPELRVLFLNVVFFGWTIFLSTIVSKG 267
            M AAPTELWDSYL ALE APLLTKSITAG IFPAAD+ AQ+FD+  +  GE    WD ARTLRWLFFGF VQAPWNH FYV+LDGALPPT DPLSTTTA+KV IDQFVQAP+FT++IFGVLGLLEGK  ADIREQL+QDYKSTML NWGVFVPA+VVNLAFCPPELRVLFLNVVFFGWTIFLST+VSKG
Sbjct:    1 MAAAPTELWDSYLHALETAPLLTKSITAGCIFPAADSVAQWFDNKGQDDGELQQQWDIARTLRWLFFGFAVQAPWNHFFYVLLDGALPPTPDPLSTTTAVKVLIDQFVQAPIFTVVIFGVLGLLEGKAVADIREQLNQDYKSTMLANWGVFVPAAVVNLAFCPPELRVLFLNVVFFGWTIFLSTVVSKG 189          
BLAST of mRNA_S-dermatodea_contig1014.99.1 vs. uniprot
Match: K0R1J6_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R1J6_THAOC)

HSP 1 Score: 232 bits (592), Expect = 1.290e-72
Identity = 111/180 (61.67%), Postives = 135/180 (75.00%), Query Frame = 0
Query:   90 WDSYLGALEAAPLLTKSITAGVIFPAADATAQFFDSARKASGEGWDFARTLRWLFFGFVVQAPWNHLFYVVLDGALPPTLDPLSTTTAIKVFIDQFVQAPVFTIIIFGVLGLLEGKTTADIREQLDQDYKSTMLVNWGVFVPASVVNLAFCPPELRVLFLNVVFFGWTIFLSTIVSKGGD 269
            W+SYL ALEA PLL KS+TAGVI  AAD   Q   S       G D AR  R+ FFGF++QAPWNH +Y++LDGALPPT DP + TT +KV IDQFVQAP+FT+IIF  LG LEGKT+ +I++QLD DYK TM+ NW ++VPA+ VN+AFCPP LRVLFLN VFF W+IFLS  ++K  D
Sbjct:   75 WESYLDALEADPLLVKSVTAGVILGAADLAGQAIQSTNDEDSGGVDIARFARFAFFGFILQAPWNHAYYLLLDGALPPTEDPFTATTGVKVLIDQFVQAPIFTVIIFAFLGFLEGKTSEEIKQQLDDDYKDTMIANWKLWVPATAVNIAFCPPILRVLFLNCVFFFWSIFLSLKLNKAED 254          
BLAST of mRNA_S-dermatodea_contig1014.99.1 vs. uniprot
Match: B8BXV6_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXV6_THAPS)

HSP 1 Score: 228 bits (582), Expect = 4.960e-72
Identity = 112/188 (59.57%), Postives = 138/188 (73.40%), Query Frame = 0
Query:   88 ELWDSYLGALEAAPLLTKSITAGVIFPAADATAQFF---------DSARKASGEGWDFARTLRWLFFGFVVQAPWNHLFYVVLDGALPPTLDPLSTTTAIKVFIDQFVQAPVFTIIIFGVLGLLEGKTTADIREQLDQDYKSTMLVNWGVFVPASVVNLAFCPPELRVLFLNVVFFGWTIFLSTIVSK 266
            E+W SYL ALE+ PLL KS+TAGVI  AAD + Q           D A   +  G D AR LR+ FFGF++QAPWNH +Y++LDGALPPT DP + TT IKV +DQF+QAP+FT+IIF  LG LEGKT  +I++QLD DY  TML NW ++VPA+ VN+AFCPP LRVLFLNVVFF W+IFLS  ++K
Sbjct:    4 EVWTSYLNALESDPLLVKSVTAGVILGAADLSGQAIQQSLAKANSDDATTITDSGVDIARFLRFAFFGFILQAPWNHFYYLLLDGALPPTPDPFTATTGIKVLVDQFIQAPIFTVIIFAFLGFLEGKTVEEIKKQLDDDYVDTMLANWKLWVPATAVNIAFCPPILRVLFLNVVFFFWSIFLSLKLNK 191          
BLAST of mRNA_S-dermatodea_contig1014.99.1 vs. uniprot
Match: A0A7S2W2E8_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W2E8_9STRA)

HSP 1 Score: 229 bits (584), Expect = 1.140e-71
Identity = 115/183 (62.84%), Postives = 137/183 (74.86%), Query Frame = 0
Query:   87 TELWDSYLGALEAAPLLTKSITAGVIFPAADATAQFFDSARKASGE---GWDFARTLRWLFFGFVVQAPWNHLFYVVLDGALPPTLDPLSTTTAIKVFIDQFVQAPVFTIIIFGVLGLLEGKTTADIREQLDQDYKSTMLVNWGVFVPASVVNLAFCPPELRVLFLNVVFFGWTIFLSTIVSK 266
            TE W SY  ALE  PLLTKSITAGVI  AAD   Q  + ++K  GE     D AR +R+ FFG V+QAPWNH +Y +LDGALPPT DP +TTT IKV IDQFVQAPVFT++IF  LGLLEGKT   +++QLD DYK TM+ NW ++VPA+ VN+AFCPP LRVLFLN VFF W+IFLS  ++K
Sbjct:   54 TEAWVSYNHALETDPLLTKSITAGVILGAADLAGQALERSQKKEGEESSSVDLARAVRFAFFGLVLQAPWNHFYYQLLDGALPPTADPFTTTTGIKVAIDQFVQAPVFTVLIFYFLGLLEGKTMESVKQQLDNDYKDTMIANWKLWVPATAVNIAFCPPLLRVLFLNCVFFFWSIFLSLKLNK 236          
BLAST of mRNA_S-dermatodea_contig1014.99.1 vs. uniprot
Match: A0A7S1YNW0_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S1YNW0_9STRA)

HSP 1 Score: 230 bits (586), Expect = 1.520e-71
Identity = 116/193 (60.10%), Postives = 141/193 (73.06%), Query Frame = 0
Query:   87 TELWDSYLGALEAAPLLTKSITAGVIFPAADATAQFFDSARKASGE-------------GWDFARTLRWLFFGFVVQAPWNHLFYVVLDGALPPTLDPLSTTTAIKVFIDQFVQAPVFTIIIFGVLGLLEGKTTADIREQLDQDYKSTMLVNWGVFVPASVVNLAFCPPELRVLFLNVVFFGWTIFLSTIVSK 266
            TE W+SYL ALEA PLL KSITAGVI  AAD + Q    A   + +               D AR LR+ FFGF++QAPWNH +Y +LDGALPPT DP ++TTAIKV IDQF+QAP+FT+IIFG LG+LEGK+   I+EQLD+DY  TML NW ++VPA+ VN+AFCPP LRVLFLNVVFF W+IFLS  ++K
Sbjct:   79 TEAWNSYLDALEANPLLVKSITAGVILGAADLSGQALQQAIATNNDDNMELSTNNNNSNSVDIARFLRFAFFGFILQAPWNHFYYQILDGALPPTEDPFTSTTAIKVIIDQFIQAPIFTVIIFGFLGVLEGKSLDSIKEQLDEDYVDTMLANWKLWVPATAVNIAFCPPILRVLFLNVVFFFWSIFLSLKLNK 271          
BLAST of mRNA_S-dermatodea_contig1014.99.1 vs. uniprot
Match: A0A7S3PZB9_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PZB9_9STRA)

HSP 1 Score: 229 bits (584), Expect = 2.030e-71
Identity = 112/180 (62.22%), Postives = 135/180 (75.00%), Query Frame = 0
Query:   90 WDSYLGALEAAPLLTKSITAGVIFPAADATAQFFDSARKASGEGWDFARTLRWLFFGFVVQAPWNHLFYVVLDGALPPTLDPLSTTTAIKVFIDQFVQAPVFTIIIFGVLGLLEGKTTADIREQLDQDYKSTMLVNWGVFVPASVVNLAFCPPELRVLFLNVVFFGWTIFLSTIVSKGGD 269
            W SY  ALE  PLLTKSITAGVI  AAD   Q  + +        D+AR  R+ FFGF++QAPWNH +Y+ LDGALPPT DPLS TT IKV IDQFVQAP+FT+IIF  LGLLEGK+ +D++EQLD+DYK TM  NW ++VPA+ VN+AFCPP LRVLFLN VFF W+IFLS  ++  G+
Sbjct:   75 WTSYNIALEEDPLLTKSITAGVILGAADFAGQALERSNSGEDNPVDYARAARFAFFGFILQAPWNHFYYLFLDGALPPTEDPLSATTGIKVVIDQFVQAPIFTVIIFFFLGLLEGKSASDVKEQLDRDYKDTMFANWKLWVPATAVNIAFCPPILRVLFLNCVFFFWSIFLSLKLNSDGE 254          
BLAST of mRNA_S-dermatodea_contig1014.99.1 vs. uniprot
Match: A0A7S0BVQ8_9STRA (Hypothetical protein n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BVQ8_9STRA)

HSP 1 Score: 226 bits (577), Expect = 2.890e-70
Identity = 112/191 (58.64%), Postives = 141/191 (73.82%), Query Frame = 0
Query:   78 SVTSMVAAPTELWDSYLGALEAAPLLTKSITAGVIFPAADATAQFFDSARKASGE--GWDFARTLRWLFFGFVVQAPWNHLFYVVLDGALPPTLDPLSTTTAIKVFIDQFVQAPVFTIIIFGVLGLLEGKTTADIREQLDQDYKSTMLVNWGVFVPASVVNLAFCPPELRVLFLNVVFFGWTIFLSTIVSK 266
            SV ++  + ++LW SY  ALE  PL+TKSITAGVI  AAD   Q  ++  K S E    DF R  R+ FFGF++QAPWNH +Y++LDGALPPT DPL+ TT IKV IDQFVQAP+FT+IIF  LGLLEGK    I +QL+ DYK+TM+ NW ++VPA+ VN+AFCPP  RVLFLN VFF W+I+LS  ++K
Sbjct:   72 SVITIATSASDLWTSYNSALETDPLITKSITAGVILGAADFAGQALEAKTKESSEETSIDFGRAARFAFFGFILQAPWNHFYYLLLDGALPPTDDPLTATTGIKVVIDQFVQAPIFTVIIFVFLGLLEGKNIESINKQLENDYKNTMVANWKLWVPATAVNIAFCPPLFRVLFLNCVFFFWSIYLSLTLNK 262          
BLAST of mRNA_S-dermatodea_contig1014.99.1 vs. uniprot
Match: A0A7R9W596_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W596_9STRA)

HSP 1 Score: 226 bits (575), Expect = 5.110e-70
Identity = 113/181 (62.43%), Postives = 138/181 (76.24%), Query Frame = 0
Query:   87 TELWDSYLGALEAAPLLTKSITAGVIFPAADATAQFFDSARKASGEGW-DFARTLRWLFFGFVVQAPWNHLFYVVLDGALPPTLDPLSTTTAIKVFIDQFVQAPVFTIIIFGVLGLLEGKTTADIREQLDQDYKSTMLVNWGVFVPASVVNLAFCPPELRVLFLNVVFFGWTIFLSTIVSK 266
            T  W +Y  ALEA PL+TKSITAGVI  +AD   Q  + A K   EG  D AR  R+  FG V+QAPWNH +Y++LDG LPPT++P +TTT +KV IDQFVQAP+FT++IF  LGLLEGKTT  I+ QLD+DYK TML NW ++VPA+VVN+AFCPP LRVLFLNVVFF W+IFLS  ++K
Sbjct:   74 TGAWAAYNDALEANPLVTKSITAGVILGSADFAGQAIERATKEDSEGSVDLARAARFAVFGLVLQAPWNHFYYLLLDGVLPPTVEPWTTTTGVKVVIDQFVQAPIFTVLIFIFLGLLEGKTTDAIKSQLDEDYKDTMLANWKLWVPATVVNIAFCPPILRVLFLNVVFFFWSIFLSLKLNK 254          
BLAST of mRNA_S-dermatodea_contig1014.99.1 vs. uniprot
Match: A0A7S4EG90_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EG90_9STRA)

HSP 1 Score: 223 bits (569), Expect = 1.640e-69
Identity = 109/197 (55.33%), Postives = 144/197 (73.10%), Query Frame = 0
Query:   78 SVTSMVAAPTELWDSYLGALEAAPLLTKSITAGVIFPAADATAQFFDSARK-----ASGEGWDFARTLRWLFFGFVVQAPWNHLFYVVLDGALPPTLDPLSTTTAIKVFIDQFVQAPVFTIIIFGVLGLLEGKTTADIREQLDQDYKSTMLVNWGVFVPASVVNLAFCPPELRVLFLNVVFFGWTIFLSTIVSKGGD 269
            S +S+   P + W +Y  ALE +PLL KS+TAGVI  AAD   Q F+ A+      ++  G D ART+R+ FFGF++QAPWNH +Y +LDGA+PPT+DP ++TTA+K  IDQFVQAP+FT++IF  LG LEGK    I++QLD DY  TM+ NW ++VPA+V+NLAF PP LRVL+LN VFF W+IFLS  ++K GD
Sbjct:   31 SSSSLHMDPQQAWTAYNDALETSPLLVKSVTAGVILGAADLAGQAFEGAQSDDESSSNDTGIDVARTVRFAFFGFILQAPWNHFYYTLLDGAIPPTVDPWTSTTAVKTVIDQFVQAPIFTVLIFAFLGFLEGKNLEAIKKQLDDDYADTMVANWKLWVPATVINLAFVPPILRVLYLNCVFFFWSIFLSLKLNKDGD 227          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1014.99.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L0V0_9PHAE1.870e-10767.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FP55_ECTSI3.270e-10782.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
K0R1J6_THAOC1.290e-7261.67Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
B8BXV6_THAPS4.960e-7259.57Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A7S2W2E8_9STRA1.140e-7162.84Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S1YNW0_9STRA1.520e-7160.10Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S3PZB9_9STRA2.030e-7162.22Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S0BVQ8_9STRA2.890e-7058.64Hypothetical protein n=2 Tax=Proboscia inermis Tax... [more]
A0A7R9W596_9STRA5.110e-7062.43Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S4EG90_9STRA1.640e-6955.33Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007248Mpv17/PMP22PFAMPF04117Mpv17_PMP22coord: 200..261
e-value: 9.2E-20
score: 70.6
IPR007248Mpv17/PMP22PANTHERPTHR11266PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17coord: 63..264
NoneNo IPR availablePANTHERPTHR11266:SF80PEROXISOMAL MEMBRANE PROTEIN 2coord: 63..264
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 203..222
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 265..277
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 223..239
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..184
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 185..202
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 245..264
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 240..244
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..31
score: 6.0
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..25
score: 0.75
NoneNo IPR availableTMHMMTMhelixcoord: 143..165
NoneNo IPR availableTMHMMTMhelixcoord: 246..265
NoneNo IPR availableTMHMMTMhelixcoord: 180..202

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1014contigS-dermatodea_contig1014:2187..6261 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1014.99.1mRNA_S-dermatodea_contig1014.99.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig1014 2157..7182 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig1014.99.1 ID=prot_S-dermatodea_contig1014.99.1|Name=mRNA_S-dermatodea_contig1014.99.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=278bp
MTLRTSRAAVAFILLASWSSQPCLGFVGTACSLSAQTRGRYASTLAAPSR
SSSTLSARRAGSGCYGAGFRRRRASPASVTSMVAAPTELWDSYLGALEAA
PLLTKSITAGVIFPAADATAQFFDSARKASGEGWDFARTLRWLFFGFVVQ
APWNHLFYVVLDGALPPTLDPLSTTTAIKVFIDQFVQAPVFTIIIFGVLG
LLEGKTTADIREQLDQDYKSTMLVNWGVFVPASVVNLAFCPPELRVLFLN
VVFFGWTIFLSTIVSKGGDGGETAGET*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007248Mpv17_PMP22