prot_S-dermatodea_contig1014.101.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig1014.101.1
Unique Nameprot_S-dermatodea_contig1014.101.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length153
Homology
BLAST of mRNA_S-dermatodea_contig1014.101.1 vs. uniprot
Match: D8LGL2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGL2_ECTSI)

HSP 1 Score: 296 bits (757), Expect = 9.770e-101
Identity = 148/152 (97.37%), Postives = 151/152 (99.34%), Query Frame = 0
Query:    1 MSLVISPEFQHILRILNTNIDGRRKVQYSLTSIKGVGRRFSNLICKKAEVDPNKRAGEMTADEIEKLVAIIQNPRQFKIPDWFLNRQKDWKTGKTTQISSQAIDQKLREDLERLKKIRSHRGIRHYWGVRVRGQHTKTTGRRGKIVAAGGRK 152
            MSLVISPEFQHILRILNTNIDGRRKVQYSLTSI+GVGRRF+NLICKKAEVDPNKRAGEMTADEIEKLVAIIQNPRQFKIPDWFLNRQKDWKTGKTTQISSQ IDQKLR+DLERLKKIRSHRGIRHYWGVRVRGQHTKTTGRRGKIVAAGGRK
Sbjct:   41 MSLVISPEFQHILRILNTNIDGRRKVQYSLTSIRGVGRRFANLICKKAEVDPNKRAGEMTADEIEKLVAIIQNPRQFKIPDWFLNRQKDWKTGKTTQISSQTIDQKLRDDLERLKKIRSHRGIRHYWGVRVRGQHTKTTGRRGKIVAAGGRK 192          
BLAST of mRNA_S-dermatodea_contig1014.101.1 vs. uniprot
Match: A0A6H5KYA8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYA8_9PHAE)

HSP 1 Score: 291 bits (745), Expect = 1.660e-99
Identity = 146/152 (96.05%), Postives = 149/152 (98.03%), Query Frame = 0
Query:    1 MSLVISPEFQHILRILNTNIDGRRKVQYSLTSIKGVGRRFSNLICKKAEVDPNKRAGEMTADEIEKLVAIIQNPRQFKIPDWFLNRQKDWKTGKTTQISSQAIDQKLREDLERLKKIRSHRGIRHYWGVRVRGQHTKTTGRRGKIVAAGGRK 152
            MSLVISPEFQHILRILNTNIDGRRKVQYSLTSI+GVGRRF+NLICKKAEVDPNKRAGEMTADEIEKLVAIIQ PRQFKIPDWFLNRQKDWKTG TTQISSQ IDQKLR+DLERLKKIRSHRGIRHYWGVRVRGQHTKTTGRRGKIVAAGGRK
Sbjct:    1 MSLVISPEFQHILRILNTNIDGRRKVQYSLTSIRGVGRRFANLICKKAEVDPNKRAGEMTADEIEKLVAIIQTPRQFKIPDWFLNRQKDWKTGTTTQISSQTIDQKLRDDLERLKKIRSHRGIRHYWGVRVRGQHTKTTGRRGKIVAAGGRK 152          
BLAST of mRNA_S-dermatodea_contig1014.101.1 vs. uniprot
Match: A0A7S2BE88_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BE88_9STRA)

HSP 1 Score: 244 bits (623), Expect = 6.380e-81
Identity = 118/148 (79.73%), Postives = 134/148 (90.54%), Query Frame = 0
Query:    1 MSLVISPEFQHILRILNTNIDGRRKVQYSLTSIKGVGRRFSNLICKKAEVDPNKRAGEMTADEIEKLVAIIQNPRQFKIPDWFLNRQKDWKTGKTTQISSQAIDQKLREDLERLKKIRSHRGIRHYWGVRVRGQHTKTTGRRGKIVAA 148
            MSL+ISP+FQHILRILNTNIDG RKV +SLT+I G+GRRF+NLICKKAEVDPNKRAGE+T DE+EKLVAIIQNP+QFKIP WFLNRQKD+KTG+  Q  S  +  KLREDLERLKKIR+HRG+RHYWG+RVRGQHTKTTGRRGK +AA
Sbjct:    1 MSLIISPDFQHILRILNTNIDGTRKVMFSLTAITGIGRRFANLICKKAEVDPNKRAGELTQDEVEKLVAIIQNPKQFKIPMWFLNRQKDYKTGRYQQAFSNNLGAKLREDLERLKKIRAHRGLRHYWGIRVRGQHTKTTGRRGKTMAA 148          
BLAST of mRNA_S-dermatodea_contig1014.101.1 vs. uniprot
Match: F0XYV2_AURAN (Uncharacterized protein n=4 Tax=Pelagomonadales TaxID=54409 RepID=F0XYV2_AURAN)

HSP 1 Score: 242 bits (618), Expect = 4.080e-80
Identity = 116/147 (78.91%), Postives = 135/147 (91.84%), Query Frame = 0
Query:    2 SLVISPEFQHILRILNTNIDGRRKVQYSLTSIKGVGRRFSNLICKKAEVDPNKRAGEMTADEIEKLVAIIQNPRQFKIPDWFLNRQKDWKTGKTTQISSQAIDQKLREDLERLKKIRSHRGIRHYWGVRVRGQHTKTTGRRGKIVAA 148
            SLVISP+FQHILR+LNTNIDGRRKV ++LTSI GVGRRFSN++CKKA VD +KRAGE+TADE+EKLVAIIQNP+QFKIP WFLNRQKD+KTGK +Q  +  + QKLREDLERLKKIR+HRG+RHYWG+RVRGQHTK+TGRRGK +AA
Sbjct:    5 SLVISPDFQHILRVLNTNIDGRRKVMFALTSIPGVGRRFSNVVCKKAAVDAHKRAGELTADEVEKLVAIIQNPKQFKIPAWFLNRQKDYKTGKYSQAFANTLQQKLREDLERLKKIRAHRGLRHYWGIRVRGQHTKSTGRRGKTMAA 151          
BLAST of mRNA_S-dermatodea_contig1014.101.1 vs. uniprot
Match: W7TCB7_9STRA (40s ribosomal protein s18 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TCB7_9STRA)

HSP 1 Score: 244 bits (622), Expect = 3.580e-79
Identity = 113/152 (74.34%), Postives = 136/152 (89.47%), Query Frame = 0
Query:    1 MSLVISPEFQHILRILNTNIDGRRKVQYSLTSIKGVGRRFSNLICKKAEVDPNKRAGEMTADEIEKLVAIIQNPRQFKIPDWFLNRQKDWKTGKTTQISSQAIDQKLREDLERLKKIRSHRGIRHYWGVRVRGQHTKTTGRRGKIVAAGGRK 152
            MSL+I+PEFQHILRILNTN+DG R VQY+LTSIKGVGRRF+N++CKKAE+D N+RAGE+T +++E+++AI+ NP+ FKIPDWFLNRQ+DWKT K +Q +S  +D KLREDLERLKKIRSHRGIRHYWGVRVRGQHTKTTGRRGK V   G+K
Sbjct:   61 MSLIITPEFQHILRILNTNVDGTRSVQYALTSIKGVGRRFANVVCKKAEIDLNQRAGELTQEKLEEVIAIVSNPKAFKIPDWFLNRQRDWKTNKPSQATSNVVDTKLREDLERLKKIRSHRGIRHYWGVRVRGQHTKTTGRRGKTVGPAGKK 212          
BLAST of mRNA_S-dermatodea_contig1014.101.1 vs. uniprot
Match: A0A836C976_9STRA (Ribosomal protein S13 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C976_9STRA)

HSP 1 Score: 238 bits (608), Expect = 1.040e-78
Identity = 117/139 (84.17%), Postives = 126/139 (90.65%), Query Frame = 0
Query:    3 LVISPEFQHILRILNTNIDGRRKVQYSLTSIKGVGRRFSNLICKKAEVDPNKRAGEMTADEIEKLVAIIQNPRQFKIPDWFLNRQKDWKTGKTTQISSQAIDQKLREDLERLKKIRSHRGIRHYWGVRVRGQHTKTTGR 141
            LV+ P+FQHILRILNTNIDGR KV Y+LT + GVGRRFSNLICKKAEVD  KRAG +TADEIEKLVAIIQNPRQFK+PDWFLNRQ+DWKTGK+ Q  +Q I QKLREDLERLKKIRSHRGIRHYWGVRVRGQHTKTTGR
Sbjct:    1 LVVGPDFQHILRILNTNIDGRIKVMYALTKVPGVGRRFSNLICKKAEVDHTKRAGMLTADEIEKLVAIIQNPRQFKVPDWFLNRQRDWKTGKSGQTFAQNIAQKLREDLERLKKIRSHRGIRHYWGVRVRGQHTKTTGR 139          
BLAST of mRNA_S-dermatodea_contig1014.101.1 vs. uniprot
Match: A0A7S0SKK9_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SKK9_9CHLO)

HSP 1 Score: 236 bits (603), Expect = 2.800e-77
Identity = 108/152 (71.05%), Postives = 134/152 (88.16%), Query Frame = 0
Query:    1 MSLVISPEFQHILRILNTNIDGRRKVQYSLTSIKGVGRRFSNLICKKAEVDPNKRAGEMTADEIEKLVAIIQNPRQFKIPDWFLNRQKDWKTGKTTQISSQAIDQKLREDLERLKKIRSHRGIRHYWGVRVRGQHTKTTGRRGKIVAAGGRK 152
            MSL++  +FQHILR+LNTN+DGR KV Y+LTSIKG+GRRF+N++CKKAE+D  KRAGE++A E+E L+ I+ NPRQF+IPDWFLNRQKD+K G+  Q+SS A+D KLR+DLERLKKIR+HRG+RHYWG+RVRGQHTKTTGRRGK V  GG+K
Sbjct:   41 MSLIVGDDFQHILRVLNTNVDGRSKVMYALTSIKGIGRRFANVVCKKAEIDMGKRAGELSAAELESLMVIVSNPRQFRIPDWFLNRQKDYKDGRYLQLSSNALDTKLRDDLERLKKIRNHRGLRHYWGIRVRGQHTKTTGRRGKTVGIGGKK 192          
BLAST of mRNA_S-dermatodea_contig1014.101.1 vs. uniprot
Match: D2D961_JATCU (S18.A ribosomal protein n=3 Tax=rosids TaxID=71275 RepID=D2D961_JATCU)

HSP 1 Score: 234 bits (596), Expect = 8.580e-77
Identity = 106/146 (72.60%), Postives = 134/146 (91.78%), Query Frame = 0
Query:    1 MSLVISPEFQHILRILNTNIDGRRKVQYSLTSIKGVGRRFSNLICKKAEVDPNKRAGEMTADEIEKLVAIIQNPRQFKIPDWFLNRQKDWKTGKTTQISSQAIDQKLREDLERLKKIRSHRGIRHYWGVRVRGQHTKTTGRRGKIV 146
            MSLV + EFQHILR+LNTN+DG++K+ ++LTSIKG+GRRF+N++CKKA+VD NKRAGE++A+E++KL+ I+ NPRQFKIPDWFLNRQKD+K GK +Q+ S A+D KLR+DLERLKKIR+HRG+RHYWG+RVRGQHTKTTGRRGK V
Sbjct:    1 MSLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELSAEELDKLMVIVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTV 146          
BLAST of mRNA_S-dermatodea_contig1014.101.1 vs. uniprot
Match: A0A6P7WE00_IXOSC (40S ribosomal protein S18 n=23 Tax=Arachnida TaxID=6854 RepID=A0A6P7WE00_IXOSC)

HSP 1 Score: 234 bits (596), Expect = 8.880e-77
Identity = 110/152 (72.37%), Postives = 135/152 (88.82%), Query Frame = 0
Query:    1 MSLVISPEFQHILRILNTNIDGRRKVQYSLTSIKGVGRRFSNLICKKAEVDPNKRAGEMTADEIEKLVAIIQNPRQFKIPDWFLNRQKDWKTGKTTQISSQAIDQKLREDLERLKKIRSHRGIRHYWGVRVRGQHTKTTGRRGKIVAAGGRK 152
            MSLVI  +FQHILR+LNTNIDGRRKV ++LT+IKGVGRRFSN++CKKA+VD NKRAGE+T +E+EKL+ I+ NPRQ+KIPDWFLNRQKD K GK +Q++S A++ KLREDLERLKKIR+HRG+RH+WG+RVRGQHTKTTGRRG+ V    +K
Sbjct:    1 MSLVIPDKFQHILRVLNTNIDGRRKVMFALTAIKGVGRRFSNMVCKKADVDLNKRAGELTEEEVEKLITIMSNPRQYKIPDWFLNRQKDIKDGKFSQVTSNALENKLREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGRRGRTVGVSKKK 152          
BLAST of mRNA_S-dermatodea_contig1014.101.1 vs. uniprot
Match: A0A0B0MXX6_GOSAR (40S ribosomal S18-like protein n=26 Tax=Malvaceae TaxID=3629 RepID=A0A0B0MXX6_GOSAR)

HSP 1 Score: 231 bits (590), Expect = 7.040e-76
Identity = 105/146 (71.92%), Postives = 132/146 (90.41%), Query Frame = 0
Query:    1 MSLVISPEFQHILRILNTNIDGRRKVQYSLTSIKGVGRRFSNLICKKAEVDPNKRAGEMTADEIEKLVAIIQNPRQFKIPDWFLNRQKDWKTGKTTQISSQAIDQKLREDLERLKKIRSHRGIRHYWGVRVRGQHTKTTGRRGKIV 146
            MSLV + +FQHILR+LNTN+DG++K+ ++LTSIKG+GRRF+N++CKKA+VD NKRAGE+TA E++ L+ I+ NPRQFKIPDWFLNRQKD+K GK +Q+ S A+D KLR+DLERLKKIR+HRG+RHYWG+RVRGQHTKTTGRRGK V
Sbjct:    1 MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELTAQELDNLMTIVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTV 146          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1014.101.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGL2_ECTSI9.770e-10197.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KYA8_9PHAE1.660e-9996.05Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A7S2BE88_9STRA6.380e-8179.73Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
F0XYV2_AURAN4.080e-8078.91Uncharacterized protein n=4 Tax=Pelagomonadales Ta... [more]
W7TCB7_9STRA3.580e-7974.3440s ribosomal protein s18 n=2 Tax=Monodopsidaceae ... [more]
A0A836C976_9STRA1.040e-7884.17Ribosomal protein S13 n=1 Tax=Tribonema minus TaxI... [more]
A0A7S0SKK9_9CHLO2.800e-7771.05Hypothetical protein n=1 Tax=Mantoniella antarctic... [more]
D2D961_JATCU8.580e-7772.60S18.A ribosomal protein n=3 Tax=rosids TaxID=71275... [more]
A0A6P7WE00_IXOSC8.880e-7772.3740S ribosomal protein S18 n=23 Tax=Arachnida TaxID... [more]
A0A0B0MXX6_GOSAR7.040e-7671.9240S ribosomal S18-like protein n=26 Tax=Malvaceae ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.8.50coord: 1..80
e-value: 1.3E-36
score: 126.5
NoneNo IPR availablePANTHERPTHR10871:SF340S RIBOSOMAL PROTEIN S18coord: 1..146
NoneNo IPR availablePANTHERPTHR1087130S RIBOSOMAL PROTEIN S13/40S RIBOSOMAL PROTEIN S18coord: 1..146
IPR02743730s ribosomal protein S13, C-terminalGENE3D4.10.910.10coord: 92..142
e-value: 3.0E-24
score: 86.6
IPR001892Ribosomal protein S13PFAMPF00416Ribosomal_S13coord: 14..142
e-value: 1.7E-52
score: 177.2
IPR001892Ribosomal protein S13PIRSFPIRSF002134RPS13p_RPS13a_RPS18e_RPS13ocoord: 5..152
e-value: 1.2E-37
score: 126.7
IPR001892Ribosomal protein S13HAMAPMF_01315Ribosomal_S13_S18coord: 12..152
score: 21.767
IPR001892Ribosomal protein S13PROSITEPS50159RIBOSOMAL_S13_2coord: 15..144
score: 34.079
IPR018269Ribosomal protein S13, conserved sitePROSITEPS00646RIBOSOMAL_S13_1coord: 121..134
IPR010979Ribosomal protein S13-like, H2THSUPERFAMILY46946S13-like H2TH domaincoord: 13..144

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1014contigS-dermatodea_contig1014:15498..21137 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1014.101.1mRNA_S-dermatodea_contig1014.101.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig1014 14699..21206 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig1014.101.1 ID=prot_S-dermatodea_contig1014.101.1|Name=mRNA_S-dermatodea_contig1014.101.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=153bp
MSLVISPEFQHILRILNTNIDGRRKVQYSLTSIKGVGRRFSNLICKKAEV
DPNKRAGEMTADEIEKLVAIIQNPRQFKIPDWFLNRQKDWKTGKTTQISS
QAIDQKLREDLERLKKIRSHRGIRHYWGVRVRGQHTKTTGRRGKIVAAGG
RK*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR02743730s_Rbsml_prot_S13_C
IPR001892Ribosomal_S13
IPR018269Ribosomal_S13_CS
IPR010979Ribosomal_S13-like_H2TH