prot_S-dermatodea_contig10136.96.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-dermatodea_contig10136.96.1
Unique Name	prot_S-dermatodea_contig10136.96.1
Type	polypeptide
Organism	Saccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length	410

Homology

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BLAST of mRNA_S-dermatodea_contig10136.96.1 vs. uniprot
Match: D8LAX4_ECTSI (Ubiquitin-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAX4_ECTSI)

HSP 1 Score: 235 bits (599), Expect = 2.610e-69
Identity = 227/433 (52.42%), Postives = 254/433 (58.66%), Query Frame = 0

Query:    1 MEPKRLIFQGRILNKDEQTLRECKLKDGLTVVVQA-APAASSTPPSAXXXXXXXXXXXXXXXXXXXXXXXXGGLGAGALMGGMSGMH-------PIDQPLASVRGQPAGVARECLTTLTKVIDNIVQHPTEDKFRKIKRSNAGFLRKVGGVPGGEACMRALGFVE-AEGEQSWLLTPSASAWDGLTAGRARIHRVLIALPAAGAAAPARGVAGAGSTAGFAAGLGELPPPGAFXXXXXXXXXXXXXXXXXXXXPDMAMISQMAQNPAMLQGMMNDPSVQAMMRSNPQMGAAMQGMMXXXXXXXXXXXXXXXXXXXXXXXERXXXXXXXXXXXSQMSQESLRAALSGGAGAGTTAAPSFPPPAAGFPAAPXXXXXXXXXXXXXXXXXXGE-------------GNAGGGAESQE--EMTEDELVAEAIRRSMED 409
            +EPKR+IFQGRILNKD+QTL++CKLKDGLTVVVQ  AP AS   P  XXXXXXXXXXXXXXXXXX         G  A    MSG+        P+ Q +A+V  QPAGVARECLTTLTKVIDNI  HPTE+K+RKIKR+NAGF RKVG VPGGEACMRALGFVE  + ++SWLL PS +AW+ LTAGR  I R L  LP A AAA A       ST GFA GLG LPPPGAF                    PDMA +++MAQNPA++QG                    MQ +M                   XXXX  XXXX       +QM          G   AG  AAP  P  A GF A  XXXXXXXXXXXXXXXXXX                + GGG   +E  EMTEDEL+AEAIRRSMED
Sbjct:   52 VEPKRIIFQGRILNKDDQTLQDCKLKDGLTVVVQVLAPGAS---PXXXXXXXXXXXXXXXXXXXXSPATPNPAAGLAAATQSMSGLXXXAVSSSPVGQAVATVSRQPAGVARECLTTLTKVIDNIKAHPTEEKYRKIKRANAGFSRKVGAVPGGEACMRALGFVEHGDAQESWLLAPSEAAWNVLTAGRVDIQRALATLPGAPAAAGA-------STGGFAGGLGVLPPPGAFPQAGFGGGTGGGGM------PDMATMARMAQNPAVMQGXXXXXXXXXXXXXXXXXXXXMQSVMARPGGLAQAFEAIQNNPAMXXXXXXXXXXPTALQRAAQMD-------FGGALAAGINAAP--PNAAQGFQAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASEGGGEAGEEGKEMTEDELIAEAIRRSMED 459

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BLAST of mRNA_S-dermatodea_contig10136.96.1 vs. uniprot
Match: A0A7S2CJQ0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CJQ0_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 7.930e-20
Identity = 48/96 (50.00%), Postives = 66/96 (68.75%), Query Frame = 0

Query:   95 VRGQPAGVARECLTTLTKVIDNIVQHPTEDKFRKIKRSNAGFLRKVGGVPGGEACMRALGFVEAEGEQSWLLTPSASAWDGLTAGRARIHRVLIAL 190
            V G  A  A+  L TL K++DNI ++P E+K+RKIK+SNA F RK+GG+PGG  C+ ALGF + +GE SW L  +  AW+ LTA +A I   ++AL
Sbjct:   47 VSGNAAPTAKVGLETLVKIVDNIAKNPGEEKYRKIKQSNATFNRKIGGLPGGRECILALGFTD-DGEGSWTLEATGPAWENLTACKAAIEPTIVAL 141

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BLAST of mRNA_S-dermatodea_contig10136.96.1 vs. uniprot
Match: A0A7S2SMK3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SMK3_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 3.310e-19
Identity = 66/185 (35.68%), Postives = 91/185 (49.19%), Query Frame = 0

Query:    5 RLIFQGRILNKDEQTLRECKLKDGLTVVVQAA--PAASSTPPSAXXXXXXXXXXXXXXXXXXXXXXXXGGLGAGALMGGMSGMHPIDQPLASVRGQPAGVARECLTTLTKVIDNIVQHPTEDKFRKIKRSNAGFLRKVGGVPGGEACMRALGFVEAEGEQSWLLTPSASAWDGLTAGRARIHRVL 187
            RLI +G+IL KD+Q L   K+  G TV++Q    PAA+   PS                             A A+ G  +    I   L  +   P    R  L TL KVIDNI+Q+P EDK+R+++ +NA F RKVG +PGG  C+R +GF + E E + +L PS  AW  L + R  +   L
Sbjct:   48 RLIHKGKIL-KDDQGLDVYKVATGETVLLQVTQRPAAAGATPSGTQAPVAAAAPMPPT--------------AAAMAGTTAPTTGIQAALEELSSNPPDALRLGLETLLKVIDNIIQNPNEDKYRRLRPANATFNRKVGSLPGGLRCVREMGFTDGEEEGTLILAPSTEAWHHLNSCRRLVQEKL 217

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BLAST of mRNA_S-dermatodea_contig10136.96.1 vs. uniprot
Match: A0A7S2SNT8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SNT8_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 3.310e-18
Identity = 66/185 (35.68%), Postives = 91/185 (49.19%), Query Frame = 0

Query:    5 RLIFQGRILNKDEQTLRECKLKDGLTVVVQAA--PAASSTPPSAXXXXXXXXXXXXXXXXXXXXXXXXGGLGAGALMGGMSGMHPIDQPLASVRGQPAGVARECLTTLTKVIDNIVQHPTEDKFRKIKRSNAGFLRKVGGVPGGEACMRALGFVEAEGEQSWLLTPSASAWDGLTAGRARIHRVL 187
            RLI +G+IL KD+Q L   K+  G TV++Q    PAA+   PS                             A A+ G  +    I   L  +   P    R  L TL KVIDNI+Q+P EDK+R+++ +NA F RKVG +PGG  C+R +GF + E E + +L PS  AW  L + R  +   L
Sbjct:   48 RLIHKGKIL-KDDQGLDVYKVATGETVLLQVTQRPAAAGATPSGTQAPVAAAAPMPPT--------------AAAMAGTTAPTTGIQAALEELSSNPPDALRLGLETLLKVIDNIIQNPNEDKYRRLRPANATFNRKVGSLPGGLRCVREMGFTDGEEEGTLILAPSTEAWHHLNSCRRLVQEKL 217

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BLAST of mRNA_S-dermatodea_contig10136.96.1 vs. uniprot
Match: A0A7R9YC84_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YC84_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 4.330e-15
Identity = 85/211 (40.28%), Postives = 115/211 (54.50%), Query Frame = 0

Query:    2 EPKRLIFQGRILNKDEQTLRECKLKDGLTVV-VQAAPAASSTPPSAXXXXXXXXXXXXXXXXXXXXXXXXGGLGAGALMGGMSGMHPIDQPLASVRGQPAGVARECLTTLTKVIDNIVQHPTEDKFRKIKRSNAGFLRKVGGVPGGEACMRALGFVEAEGEQSWLLTPSASAWDGLTAGRARIHRVLIALPAAGAAAPARGVAGAGSTAGF 211
            E +RLI+ G++L      L    +KDG T++ ++  P  S++ P A  XXXXXXXXXXXXXXXX             L        P    + ++    A    E L TL KV++NI  +P E K+R +K+ NA F R++GGV G  AC+R LGF +  GE +W LTPSASAW+ L+A R  + RV+ A   +  AA A    GA    GF
Sbjct:  103 ENQRLIYTGKLLKNGADPLAPFGIKDGDTILYMRMNPPRSASAPRAPAXXXXXXXXXXXXXXXXQR--------TNRLTIPAHQRTPFTHAVETLAADDAAKRPEALRTLLKVMENIQNNPLEAKYRTLKKGNAVFNRRLGGVMGAAACLRELGFQD-RGE-TWELTPSASAWEILSAARTHLQRVIEAESPSTQAAAAANAPGAAFGQGF 303

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BLAST of mRNA_S-dermatodea_contig10136.96.1 vs. uniprot
Match: A0A1V9Z472_9STRA (Ubiquitin family protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z472_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 2.830e-14
Identity = 62/187 (33.16%), Postives = 93/187 (49.73%), Query Frame = 0

Query:    2 EPKRLIFQGRILNKDEQTLRECKLKDGLTV--------VVQAAPAASSTPPSAXXXXXXXXXXXXXXXXXXXXXXXXGGLGAGALMGGMSGMHPIDQPLASVRGQPAGVARECLTTLTKVIDNIVQHPTEDKFRKIKRSNAGFLRKVGGVPGGEACMRALGFVEAEGEQSWLLTPSASAWDGLTAGR 180
            E +RLIFQGR+L+ ++ TL    L DGLTV        +  A PA ++TP S                             A ++    + + P+   L  ++  PAG+A   L TL K+ +NIV HP+E+K+RKI+ +N    +KV  VP G AC+ A+GF     E   +L P+A+ W+ L A +
Sbjct:   40 EAQRLIFQGRVLD-EKATLASYSLADGLTVHLAINTKLMPAAVPAPTTTPASV----------------------------AASIPTPATPVSPLVTLLPLLKQTPAGIA--ALGTLRKMAENIVNHPSEEKYRKIRVANEALKKKVLDVPHGLACVHAMGFAPGVEEGHLVLVPTAANWEQLVAAK 195

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BLAST of mRNA_S-dermatodea_contig10136.96.1 vs. uniprot
Match: A0A1V9ZZ66_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZZ66_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 8.380e-14
Identity = 74/188 (39.36%), Postives = 97/188 (51.60%), Query Frame = 0

Query:    2 EPKRLIFQGRILNKDEQTLRECKLKDGLTVVVQAAPAASSTPPSAXXXXXXXXXXXXXXXXXXXXXXXXGGLGAGALMGGMSGMHPIDQPLASVRGQPAGVARECLTTLTKVIDNIVQHPTEDKFRKIKRSNAGFLRKVGGVPGGEACMRALGFVEAEGEQSWLLTPSASAWDGLTAGRARIHRVLIA 189
            E +RLIFQGR+L+ D+ TL    L   L V +       ++ P+A    XXXXXXXXXX                      S  HPI   L  ++   AG+    LTT+ K+ +NIV HPTE+K+RKI+ SN    RKV  VP G AC++A+GF     E   +L PSA+ WD L A +  I    IA
Sbjct: 1096 EAQRLIFQGRVLD-DKATLTSYGLNSELIVHLAINTKLMASTPAAPSPAXXXXXXXXXXSVQPASS---------------SQQHPIAAHLPLLKQTTAGIT--ALTTIKKMAENIVNHPTEEKYRKIRLSNEALKRKVLDVPHGLACVQAMGFASGVEEGFLVLVPSAANWDQLIAAKRLIDAASIA 1265

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BLAST of mRNA_S-dermatodea_contig10136.96.1 vs. uniprot
Match: A0A813IEN4_POLGL (Hypothetical protein n=3 Tax=Polarella glacialis TaxID=89957 RepID=A0A813IEN4_POLGL)

HSP 1 Score: 80.1 bits (196), Expect = 1.660e-13
Identity = 41/102 (40.20%), Postives = 64/102 (62.75%), Query Frame = 0

Query:   88 IDQPLASVRGQPAGVARECLTTLTKVIDNIVQHPTEDKFRKIKRSNAGFLRKVGGVPGGEACMRALGFVEA--EGEQSWLLTPSASAWDGLTAGRARIHRVL 187
            +D+ +A +      VA+  + TLTK+ +NI+  P E+KF+++K+SNA   RK+  VPGG AC+ ALGF E+  EGE +W     +  +D L  G+AR+ + L
Sbjct:    1 MDRAVAQLLTNSKDVAKTAMDTLTKIAENIIHRPKEEKFKRLKKSNAAVCRKLLDVPGGVACLVALGFTESTHEGEPAWCAPGDSRGFDLLIDGKARLAQEL 102

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BLAST of mRNA_S-dermatodea_contig10136.96.1 vs. uniprot
Match: A0A067C9E2_SAPPC (Ubiquitin-like domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C9E2_SAPPC)

HSP 1 Score: 82.0 bits (201), Expect = 1.740e-13
Identity = 75/203 (36.95%), Postives = 105/203 (51.72%), Query Frame = 0

Query:    2 EPKRLIFQGRILNKDEQTLRECKLKDGLTV--VVQAA--PAASSTP-PSAXXXXXXXXXXXXXXXXXXXXXXXXGGLGAGALMGGMSGMHPIDQPLASVRGQPAGVARECLTTLTKVIDNIVQHPTEDKFRKIKRSNAGFLRKVGGVPGGEACMRALGFVEAEGEQSWLLTPSASAWDGLTAGRARIHRVLIALPAAGAAAPA 199
            E +RLIFQGR+L+ ++ TL    L DGLTV  V+ A   PAA+ TP P+A XXX                        A +    +  + P+      ++   AGVA   L TL K+ +NIV HPTE+K+RKI+ SN    +KV  VP G AC+ A+GF     E   +L P+A+ W+ L A +  + +      +A AAAPA
Sbjct:   41 EAQRLIFQGRVLD-EKATLASYALTDGLTVHLVINAKLMPAATPTPAPTATXXX------------------------ASSTQVSLVSLLPL------LKQTTAGVA--ALATLKKMAENIVNHPTEEKYRKIRLSNEALKKKVLDVPHGLACVHAMGFAAGVEEGFLVLVPTATNWEHLVASKRLLDQA-----SAPAAAPA 205

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BLAST of mRNA_S-dermatodea_contig10136.96.1 vs. uniprot
Match: A0A448ZQX1_9STRA (Ubiquitin-like domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZQX1_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 5.300e-13
Identity = 58/196 (29.59%), Postives = 88/196 (44.90%), Query Frame = 0

Query:   87 PIDQPLASVR-GQPAGVARECLTTLTKVIDNIVQHPTEDKFRKIKRSNAGFLRKVGGVPGGEACMRALGFV----EAEGEQSWLLTPSASAWDGLTAGRARIHRVLIALPAAGAAAPARGVAGAGSTAGFAAGLGELPPPGAFXXXXXXXXXXXXXXXXXXXXPDMAMISQMAQNPAMLQGMMNDPSVQAMMRSNP 277
            P+   L  +R G P  V    + TL KV+ NIV HP E+K+R++K+ N  F +++GG+ GG  CM A GF     E E  + + L  +A +W+ L   + R+   +    A     P +    AG   G     G  PPPG                           +S+M  +P  LQ  + +P +Q M+RS+P
Sbjct:  147 PLGLALERLRSGNPPSVYATAVGTLGKVLGNIVSHPMEEKYRRVKKQNPAFRKRLGGLAGGHDCMLACGFRVEVDEGENAEVYKLHATADSWNALVEAKTRVEEAVAKAAAGDRQQPVQAPGPAGLLPG-----GGFPPPGGLPNDPALRDS----------------VSRMMSDPRALQAALQNPMLQQMIRSDP 321

The following BLAST results are available for this feature:

BLAST of mRNA_S-dermatodea_contig10136.96.1 vs. uniprot

BLAST of mRNA_S-dermatodea_contig10136.96.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LAX4_ECTSI	2.610e-69	52.42	Ubiquitin-like domain-containing protein n=2 Tax=E...	[more]
A0A7S2CJQ0_9STRA	7.930e-20	50.00	Hypothetical protein (Fragment) n=1 Tax=Florenciel...	[more]
A0A7S2SMK3_9STRA	3.310e-19	35.68	Hypothetical protein (Fragment) n=1 Tax=Rhizochrom...	[more]
A0A7S2SNT8_9STRA	3.310e-18	35.68	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A7R9YC84_9STRA	4.330e-15	40.28	Hypothetical protein (Fragment) n=1 Tax=Pinguiococ...	[more]
A0A1V9Z472_9STRA	2.830e-14	33.16	Ubiquitin family protein n=1 Tax=Achlya hypogyna T...	[more]
A0A1V9ZZ66_9STRA	8.380e-14	39.36	Uncharacterized protein n=1 Tax=Thraustotheca clav...	[more]
A0A813IEN4_POLGL	1.660e-13	40.20	Hypothetical protein n=3 Tax=Polarella glacialis T...	[more]
A0A067C9E2_SAPPC	1.740e-13	36.95	Ubiquitin-like domain-containing protein n=2 Tax=S...	[more]
A0A448ZQX1_9STRA	5.300e-13	29.59	Ubiquitin-like domain-containing protein n=1 Tax=P...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018997	PUB domain	SMART	SM00580	PGNneu	coord: 105..168 e-value: 9.1E-12 score: 55.1
IPR018997	PUB domain	PFAM	PF09409	PUB	coord: 104..171 e-value: 5.3E-17 score: 61.5
None	No IPR available	GENE3D	1.20.58.2190		coord: 89..184 e-value: 2.0E-19 score: 71.0
None	No IPR available	GENE3D	3.10.20.90		coord: 2..53 e-value: 6.1E-6 score: 27.5
IPR000626	Ubiquitin domain	PFAM	PF00240	ubiquitin	coord: 5..33 e-value: 3.1E-6 score: 26.9
IPR000626	Ubiquitin domain	PROSITE	PS50053	UBIQUITIN_2	coord: 1..33 score: 9.853
IPR015496	Ubiquilin	PANTHER	PTHR10677	UBIQUILIN	coord: 5..388
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 5..52
IPR036339	PUB-like domain superfamily	SUPERFAMILY	143503	PUG domain-like	coord: 94..169

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-dermatodea_contig10136	contig	S-dermatodea_contig10136:5962..7751 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-dermatodea_contig10136.96.1	mRNA_S-dermatodea_contig10136.96.1	Saccorhiza dermatodea SderLu1190fm monoicous	mRNA	S-dermatodea_contig10136 5962..7766 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-dermatodea_contig10136.96.1 ID=prot_S-dermatodea_contig10136.96.1|Name=mRNA_S-dermatodea_contig10136.96.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=410bp
MEPKRLIFQGRILNKDEQTLRECKLKDGLTVVVQAAPAASSTPPSAASAT
TPSPAAAAPARPAAAAQALPGGLGAGALMGGMSGMHPIDQPLASVRGQPA
GVARECLTTLTKVIDNIVQHPTEDKFRKIKRSNAGFLRKVGGVPGGEACM
RALGFVEAEGEQSWLLTPSASAWDGLTAGRARIHRVLIALPAAGAAAPAR
GVAGAGSTAGFAAGLGELPPPGAFPGGFGGGGGMGMGGGMGGGMPDMAMI
SQMAQNPAMLQGMMNDPSVQAMMRSNPQMGAAMQGMMANPALMSQAFSAM
QNNPAMMQQAERMMQDPAALQQASQMSQESLRAALSGGAGAGTTAAPSFP
PPAAGFPAAPAPAPAALPAAVAPAPAPVGEGNAGGGAESQEEMTEDELVA
EAIRRSMED*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR018997	PUB_domain
IPR000626	Ubiquitin_dom
IPR015496	Ubiquilin
IPR029071	Ubiquitin-like_domsf
IPR036339	PUB-like_dom_sf