mRNA_S-dermatodea_contig10136.96.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig10136.96.1 vs. uniprot
Match: D8LAX4_ECTSI (Ubiquitin-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAX4_ECTSI) HSP 1 Score: 244 bits (622), Expect = 1.180e-72 Identity = 232/438 (52.97%), Postives = 259/438 (59.13%), Query Frame = 1
Query: 1 RSQFDMEPKRLIFQGRILNKDEQTLRECKLKDGLTVVVQA-APAASSTPPSAXXXXXXXXXXXXXXXXXXXXXXXXGGLGAGALMGGMSGMH-------PIDQPLASVRGQPAGVARECLTTLTKVIDNIVQHPTEDKFRKIKRSNAGFLRKVGGVPGGEACMRALGFVE-AEGEQSWLLTPSASAWDGLTAGRARIHRVLIALPAAGAAAPARGVAGAGSTAGFAAGLGELPPPGAFXXXXXXXXXXXXXXXXXXXXPDMAMISQMAQNPAMLQGMMNDPSVQAMMRSNPQMGAAMQGMMXXXXXXXXXXXXXXXXXXXXXXXERXXXXXXXXXXXSQMSQESLRAALSGGAGAGTTAAPSFPPPAAGFPAAPXXXXXXXXXXXXXXXXXXGE-------------GNAGGGAESQE--EMTEDELVAEAIRRSMED 1242
RSQFD+EPKR+IFQGRILNKD+QTL++CKLKDGLTVVVQ AP AS P XXXXXXXXXXXXXXXXXX G A MSG+ P+ Q +A+V QPAGVARECLTTLTKVIDNI HPTE+K+RKIKR+NAGF RKVG VPGGEACMRALGFVE + ++SWLL PS +AW+ LTAGR I R L LP A AAA A ST GFA GLG LPPPGAF PDMA +++MAQNPA++QG MQ +M XXXX XXXX +QM G AG AAP P A GF A XXXXXXXXXXXXXXXXXX + GGG +E EMTEDEL+AEAIRRSMED
Sbjct: 47 RSQFDVEPKRIIFQGRILNKDDQTLQDCKLKDGLTVVVQVLAPGAS---PXXXXXXXXXXXXXXXXXXXXSPATPNPAAGLAAATQSMSGLXXXAVSSSPVGQAVATVSRQPAGVARECLTTLTKVIDNIKAHPTEEKYRKIKRANAGFSRKVGAVPGGEACMRALGFVEHGDAQESWLLAPSEAAWNVLTAGRVDIQRALATLPGAPAAAGA-------STGGFAGGLGVLPPPGAFPQAGFGGGTGGGGM------PDMATMARMAQNPAVMQGXXXXXXXXXXXXXXXXXXXXMQSVMARPGGLAQAFEAIQNNPAMXXXXXXXXXXPTALQRAAQMD-------FGGALAAGINAAP--PNAAQGFQAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASEGGGEAGEEGKEMTEDELIAEAIRRSMED 459
BLAST of mRNA_S-dermatodea_contig10136.96.1 vs. uniprot
Match: A0A7S2CJQ0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CJQ0_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 8.340e-20 Identity = 48/96 (50.00%), Postives = 66/96 (68.75%), Query Frame = 1
Query: 298 VRGQPAGVARECLTTLTKVIDNIVQHPTEDKFRKIKRSNAGFLRKVGGVPGGEACMRALGFVEAEGEQSWLLTPSASAWDGLTAGRARIHRVLIAL 585
V G A A+ L TL K++DNI ++P E+K+RKIK+SNA F RK+GG+PGG C+ ALGF + +GE SW L + AW+ LTA +A I ++AL
Sbjct: 47 VSGNAAPTAKVGLETLVKIVDNIAKNPGEEKYRKIKQSNATFNRKIGGLPGGRECILALGFTD-DGEGSWTLEATGPAWENLTACKAAIEPTIVAL 141
BLAST of mRNA_S-dermatodea_contig10136.96.1 vs. uniprot
Match: A0A7S2SMK3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SMK3_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 4.780e-19 Identity = 67/190 (35.26%), Postives = 93/190 (48.95%), Query Frame = 1
Query: 13 DMEPKRLIFQGRILNKDEQTLRECKLKDGLTVVVQAA--PAASSTPPSAXXXXXXXXXXXXXXXXXXXXXXXXGGLGAGALMGGMSGMHPIDQPLASVRGQPAGVARECLTTLTKVIDNIVQHPTEDKFRKIKRSNAGFLRKVGGVPGGEACMRALGFVEAEGEQSWLLTPSASAWDGLTAGRARIHRVL 576
D +RLI +G+IL KD+Q L K+ G TV++Q PAA+ PS A A+ G + I L + P R L TL KVIDNI+Q+P EDK+R+++ +NA F RKVG +PGG C+R +GF + E E + +L PS AW L + R + L
Sbjct: 43 DPAAQRLIHKGKIL-KDDQGLDVYKVATGETVLLQVTQRPAAAGATPSGTQAPVAAAAPMPPT--------------AAAMAGTTAPTTGIQAALEELSSNPPDALRLGLETLLKVIDNIIQNPNEDKYRRLRPANATFNRKVGSLPGGLRCVREMGFTDGEEEGTLILAPSTEAWHHLNSCRRLVQEKL 217
BLAST of mRNA_S-dermatodea_contig10136.96.1 vs. uniprot
Match: A0A7S2SNT8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SNT8_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 4.730e-18 Identity = 67/190 (35.26%), Postives = 93/190 (48.95%), Query Frame = 1
Query: 13 DMEPKRLIFQGRILNKDEQTLRECKLKDGLTVVVQAA--PAASSTPPSAXXXXXXXXXXXXXXXXXXXXXXXXGGLGAGALMGGMSGMHPIDQPLASVRGQPAGVARECLTTLTKVIDNIVQHPTEDKFRKIKRSNAGFLRKVGGVPGGEACMRALGFVEAEGEQSWLLTPSASAWDGLTAGRARIHRVL 576
D +RLI +G+IL KD+Q L K+ G TV++Q PAA+ PS A A+ G + I L + P R L TL KVIDNI+Q+P EDK+R+++ +NA F RKVG +PGG C+R +GF + E E + +L PS AW L + R + L
Sbjct: 43 DPAAQRLIHKGKIL-KDDQGLDVYKVATGETVLLQVTQRPAAAGATPSGTQAPVAAAAPMPPT--------------AAAMAGTTAPTTGIQAALEELSSNPPDALRLGLETLLKVIDNIIQNPNEDKYRRLRPANATFNRKVGSLPGGLRCVREMGFTDGEEEGTLILAPSTEAWHHLNSCRRLVQEKL 217
BLAST of mRNA_S-dermatodea_contig10136.96.1 vs. uniprot
Match: A0A7R9YC84_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YC84_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 8.300e-15 Identity = 53/125 (42.40%), Postives = 72/125 (57.60%), Query Frame = 1
Query: 274 PIDQPLASVRGQPAGVARECLTTLTKVIDNIVQHPTEDKFRKIKRSNAGFLRKVGGVPGGEACMRALGFVEAEGEQSWLLTPSASAWDGLTAGRARIHRVLIALPAAGAAAPARGVAGAGSTAGF 648
P + ++ A E L TL KV++NI +P E K+R +K+ NA F R++GGV G AC+R LGF + GE +W LTPSASAW+ L+A R + RV+ A + AA A GA GF
Sbjct: 181 PFTHAVETLAADDAAKRPEALRTLLKVMENIQNNPLEAKYRTLKKGNAVFNRRLGGVMGAAACLRELGFQD-RGE-TWELTPSASAWEILSAARTHLQRVIEAESPSTQAAAAANAPGAAFGQGF 303
BLAST of mRNA_S-dermatodea_contig10136.96.1 vs. uniprot
Match: A0A1V9Z472_9STRA (Ubiquitin family protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z472_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 5.360e-14 Identity = 62/187 (33.16%), Postives = 93/187 (49.73%), Query Frame = 1
Query: 19 EPKRLIFQGRILNKDEQTLRECKLKDGLTV--------VVQAAPAASSTPPSAXXXXXXXXXXXXXXXXXXXXXXXXGGLGAGALMGGMSGMHPIDQPLASVRGQPAGVARECLTTLTKVIDNIVQHPTEDKFRKIKRSNAGFLRKVGGVPGGEACMRALGFVEAEGEQSWLLTPSASAWDGLTAGR 555
E +RLIFQGR+L+ ++ TL L DGLTV + A PA ++TP S A ++ + + P+ L ++ PAG+A L TL K+ +NIV HP+E+K+RKI+ +N +KV VP G AC+ A+GF E +L P+A+ W+ L A +
Sbjct: 40 EAQRLIFQGRVLD-EKATLASYSLADGLTVHLAINTKLMPAAVPAPTTTPASV----------------------------AASIPTPATPVSPLVTLLPLLKQTPAGIA--ALGTLRKMAENIVNHPSEEKYRKIRVANEALKKKVLDVPHGLACVHAMGFAPGVEEGHLVLVPTAANWEQLVAAK 195
BLAST of mRNA_S-dermatodea_contig10136.96.1 vs. uniprot
Match: A0A1V9ZZ66_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZZ66_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 1.570e-13 Identity = 74/188 (39.36%), Postives = 97/188 (51.60%), Query Frame = 1
Query: 19 EPKRLIFQGRILNKDEQTLRECKLKDGLTVVVQAAPAASSTPPSAXXXXXXXXXXXXXXXXXXXXXXXXGGLGAGALMGGMSGMHPIDQPLASVRGQPAGVARECLTTLTKVIDNIVQHPTEDKFRKIKRSNAGFLRKVGGVPGGEACMRALGFVEAEGEQSWLLTPSASAWDGLTAGRARIHRVLIA 582
E +RLIFQGR+L+ D+ TL L L V + ++ P+A XXXXXXXXXX S HPI L ++ AG+ LTT+ K+ +NIV HPTE+K+RKI+ SN RKV VP G AC++A+GF E +L PSA+ WD L A + I IA
Sbjct: 1096 EAQRLIFQGRVLD-DKATLTSYGLNSELIVHLAINTKLMASTPAAPSPAXXXXXXXXXXSVQPASS---------------SQQHPIAAHLPLLKQTTAGIT--ALTTIKKMAENIVNHPTEEKYRKIRLSNEALKRKVLDVPHGLACVQAMGFASGVEEGFLVLVPSAANWDQLIAAKRLIDAASIA 1265
BLAST of mRNA_S-dermatodea_contig10136.96.1 vs. uniprot
Match: A0A813IEN4_POLGL (Hypothetical protein n=3 Tax=Polarella glacialis TaxID=89957 RepID=A0A813IEN4_POLGL) HSP 1 Score: 80.1 bits (196), Expect = 1.720e-13 Identity = 41/102 (40.20%), Postives = 64/102 (62.75%), Query Frame = 1
Query: 277 IDQPLASVRGQPAGVARECLTTLTKVIDNIVQHPTEDKFRKIKRSNAGFLRKVGGVPGGEACMRALGFVEA--EGEQSWLLTPSASAWDGLTAGRARIHRVL 576
+D+ +A + VA+ + TLTK+ +NI+ P E+KF+++K+SNA RK+ VPGG AC+ ALGF E+ EGE +W + +D L G+AR+ + L
Sbjct: 1 MDRAVAQLLTNSKDVAKTAMDTLTKIAENIIHRPKEEKFKRLKKSNAAVCRKLLDVPGGVACLVALGFTESTHEGEPAWCAPGDSRGFDLLIDGKARLAQEL 102
BLAST of mRNA_S-dermatodea_contig10136.96.1 vs. uniprot
Match: A0A067C9E2_SAPPC (Ubiquitin-like domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C9E2_SAPPC) HSP 1 Score: 81.3 bits (199), Expect = 3.270e-13 Identity = 75/203 (36.95%), Postives = 105/203 (51.72%), Query Frame = 1
Query: 19 EPKRLIFQGRILNKDEQTLRECKLKDGLTV--VVQAA--PAASSTP-PSAXXXXXXXXXXXXXXXXXXXXXXXXGGLGAGALMGGMSGMHPIDQPLASVRGQPAGVARECLTTLTKVIDNIVQHPTEDKFRKIKRSNAGFLRKVGGVPGGEACMRALGFVEAEGEQSWLLTPSASAWDGLTAGRARIHRVLIALPAAGAAAPA 612
E +RLIFQGR+L+ ++ TL L DGLTV V+ A PAA+ TP P+A XXX A + + + P+ ++ AGVA L TL K+ +NIV HPTE+K+RKI+ SN +KV VP G AC+ A+GF E +L P+A+ W+ L A + + + +A AAAPA
Sbjct: 41 EAQRLIFQGRVLD-EKATLASYALTDGLTVHLVINAKLMPAATPTPAPTATXXX------------------------ASSTQVSLVSLLPL------LKQTTAGVA--ALATLKKMAENIVNHPTEEKYRKIRLSNEALKKKVLDVPHGLACVHAMGFAAGVEEGFLVLVPTATNWEHLVASKRLLDQA-----SAPAAAPA 205
BLAST of mRNA_S-dermatodea_contig10136.96.1 vs. uniprot
Match: A0A448ZQX1_9STRA (Ubiquitin-like domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZQX1_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 5.510e-13 Identity = 58/196 (29.59%), Postives = 88/196 (44.90%), Query Frame = 1
Query: 274 PIDQPLASVR-GQPAGVARECLTTLTKVIDNIVQHPTEDKFRKIKRSNAGFLRKVGGVPGGEACMRALGFV----EAEGEQSWLLTPSASAWDGLTAGRARIHRVLIALPAAGAAAPARGVAGAGSTAGFAAGLGELPPPGAFXXXXXXXXXXXXXXXXXXXXPDMAMISQMAQNPAMLQGMMNDPSVQAMMRSNP 846
P+ L +R G P V + TL KV+ NIV HP E+K+R++K+ N F +++GG+ GG CM A GF E E + + L +A +W+ L + R+ + A P + AG G G PPPG +S+M +P LQ + +P +Q M+RS+P
Sbjct: 147 PLGLALERLRSGNPPSVYATAVGTLGKVLGNIVSHPMEEKYRRVKKQNPAFRKRLGGLAGGHDCMLACGFRVEVDEGENAEVYKLHATADSWNALVEAKTRVEEAVAKAAAGDRQQPVQAPGPAGLLPG-----GGFPPPGGLPNDPALRDS----------------VSRMMSDPRALQAALQNPMLQQMIRSDP 321 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10136.96.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig10136.96.1 >prot_S-dermatodea_contig10136.96.1 ID=prot_S-dermatodea_contig10136.96.1|Name=mRNA_S-dermatodea_contig10136.96.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=410bp MEPKRLIFQGRILNKDEQTLRECKLKDGLTVVVQAAPAASSTPPSAASATback to top mRNA from alignment at S-dermatodea_contig10136:5962..7766- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig10136.96.1 ID=mRNA_S-dermatodea_contig10136.96.1|Name=mRNA_S-dermatodea_contig10136.96.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1805bp|location=Sequence derived from alignment at S-dermatodea_contig10136:5962..7766- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig10136:5962..7766- >mRNA_S-dermatodea_contig10136.96.1 ID=mRNA_S-dermatodea_contig10136.96.1|Name=mRNA_S-dermatodea_contig10136.96.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2460bp|location=Sequence derived from alignment at S-dermatodea_contig10136:5962..7766- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |