prot_S-dermatodea_contig10104.71.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig10104.71.1
Unique Nameprot_S-dermatodea_contig10104.71.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length121
Homology
BLAST of mRNA_S-dermatodea_contig10104.71.1 vs. uniprot
Match: A0A6H5LEZ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LEZ0_9PHAE)

HSP 1 Score: 188 bits (477), Expect = 6.150e-53
Identity = 92/113 (81.42%), Postives = 100/113 (88.50%), Query Frame = 0
Query:    9 QRDAQPELYGIYDGSVSKIADFGCFVELRGFPSLPNGKRLEGLVHVSQIQNGMLRDASKAVKRGQPCKVKVVSQAGGRLGLSIKEVNQTTGEDLLPERGHEAAIKLAEELRSN 121
            ++DAQPELYGIYDGSVSK+ DFGCFVELRGFP   NGKR EGLVHVSQIQNGMLRD SK VKRGQ CKVKV+S AG RL LSIKEV+QTTGEDL+P RGHEAA KLA+EL+SN
Sbjct:  315 KQDAQPELYGIYDGSVSKVMDFGCFVELRGFPPQANGKRQEGLVHVSQIQNGMLRDPSKVVKRGQNCKVKVISMAGARLSLSIKEVDQTTGEDLMPGRGHEAAAKLADELKSN 427          
BLAST of mRNA_S-dermatodea_contig10104.71.1 vs. uniprot
Match: D8LN25_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN25_ECTSI)

HSP 1 Score: 149 bits (376), Expect = 2.450e-39
Identity = 79/113 (69.91%), Postives = 86/113 (76.11%), Query Frame = 0
Query:    9 QRDAQPELYGIYDGSVSKIADFGCFVELRGFPSLPNGKRLEGLVHVSQIQNGMLRDASKAVKRGQPCKVKVVSQAGGRLGLSIKEVNQTTGEDLLPERGHEAAIKLAEELRSN 121
            ++DAQPELYGIYDGSVSK                 NGKR EGLVHVSQIQNGMLRD SK VKRGQ CKVKV+S AG RL LSIKEV+Q TGEDL+P RGHEAA KLA+EL+SN
Sbjct:  316 KQDAQPELYGIYDGSVSKA----------------NGKRQEGLVHVSQIQNGMLRDPSKVVKRGQNCKVKVISMAGARLSLSIKEVDQATGEDLMPGRGHEAAAKLADELKSN 412          
BLAST of mRNA_S-dermatodea_contig10104.71.1 vs. uniprot
Match: A0A835YV72_9STRA (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV72_9STRA)

HSP 1 Score: 145 bits (365), Expect = 7.600e-38
Identity = 71/110 (64.55%), Postives = 85/110 (77.27%), Query Frame = 0
Query:   12 AQPELYGIYDGSVSKIADFGCFVELRGFPSLPNGKRLEGLVHVSQIQNGMLRDASKAVKRGQPCKVKVVSQAGGRLGLSIKEVNQTTGEDLLPERGHEAAIKLAEELRSN 121
            A P+LYGIY+G +SK+ DFG FVELRGFP    G+R EGLVHVSQI  G LRD   AV+RGQ  +VKV+S AG R+ LS+KEV+Q TG DL+PERGHEA  + AE+LRSN
Sbjct:  342 AVPQLYGIYEGQISKVMDFGAFVELRGFPPGDGGRRPEGLVHVSQISAGALRDPKAAVRRGQRVRVKVISAAGARVSLSMKEVDQETGADLVPERGHEAQARAAEDLRSN 451          
BLAST of mRNA_S-dermatodea_contig10104.71.1 vs. uniprot
Match: A0A7S3MIU8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MIU8_9STRA)

HSP 1 Score: 123 bits (309), Expect = 2.910e-32
Identity = 61/115 (53.04%), Postives = 80/115 (69.57%), Query Frame = 0
Query:    6 KRGQRDAQPELYGIYDGSVSKIADFGCFVELRGFPSLPNGKRLEGLVHVSQIQNGMLRDASKAVKRGQPCKVKVVSQAGGRLGLSIKEVNQTTGEDLLPERGHEAAIKLAEELRS 120
            KR    ++PE+YGIYDG ++ I DFGCFVEL G        R EGLVHV+Q+Q GM++D    VKRGQ  KVKV+S  G ++ LS+KEV+Q TG DLLPER  E+  +L +E+R+
Sbjct:   12 KRKAVPSEPEIYGIYDGKITNILDFGCFVELDGM------MRKEGLVHVAQVQQGMIKDLKSVVKRGQKVKVKVISITGTKMALSMKEVDQNTGADLLPERSKESMARLQQEMRN 120          
BLAST of mRNA_S-dermatodea_contig10104.71.1 vs. uniprot
Match: A0A7S1XM15_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XM15_9STRA)

HSP 1 Score: 108 bits (270), Expect = 5.030e-28
Identity = 57/113 (50.44%), Postives = 71/113 (62.83%), Query Frame = 0
Query:    7 RGQRDAQPELYGIYDGSVSKIADFGCFVELRGFPSLPNGKRLEGLVHVSQIQNGMLRDASKAVKRGQPCKVKVVSQAGGRLGLSIKEVNQTTGEDLLPERGHEAAIKLAEELR 119
            R  R  + ELY +Y G V+K  DFG FVE+ G P     +  EGLVHVSQ+  G +R     V RGQP KVKV+S AG R+GLS+KEV+Q TG DL P+R  E   +L E+ R
Sbjct:   14 RRARGGELELYEVYGGRVTKTTDFGAFVEIEGGP-----RGREGLVHVSQLSQGQVRRPDDVVSRGQPVKVKVISMAGSRIGLSMKEVDQATGRDLFPQRSREGLRQLDEDNR 121          
BLAST of mRNA_S-dermatodea_contig10104.71.1 vs. uniprot
Match: A0A7S2WCN0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WCN0_9STRA)

HSP 1 Score: 112 bits (279), Expect = 1.920e-27
Identity = 59/108 (54.63%), Postives = 77/108 (71.30%), Query Frame = 0
Query:   14 PELYGIYDGSVSKIADFGCFVELRGFPSLPNGKR--LEGLVHVSQIQNGMLRDASKAVKRGQPCKVKVVSQAGGRLGLSIKEVNQTTGEDLLPERGHEAAIKLAEELR 119
            PE+YGIY G V+KI +FG FVEL G   +  G+R   EGLVHVS I++GM+ D SK V R Q  KVK++S AG ++ LS+KEV+Q TG+DL+P R  E   K+AE+LR
Sbjct:   17 PEVYGIYSGRVTKIMNFGVFVELEG---VSGGRREHKEGLVHVSHIRSGMVTDPSKEVSRNQRVKVKIISIAGTKMSLSMKEVDQRTGQDLMPARSKEGLAKMAEDLR 121          
BLAST of mRNA_S-dermatodea_contig10104.71.1 vs. uniprot
Match: A0A7S2MKF0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MKF0_9STRA)

HSP 1 Score: 102 bits (255), Expect = 5.100e-23
Identity = 52/115 (45.22%), Postives = 77/115 (66.96%), Query Frame = 0
Query:    9 QRDAQPELYGIYDGSVSKIADFGCFVELRGFPSLPNG--KRLEGLVHVSQIQNGMLRDASKAVKRGQPCKVKVVSQAGGRLGLSIKEVNQTTGEDLLPERGHEAAIKLAEELRSN 121
            ++ + PELYGIY+G V+KI +FG FVE+   P   +G  ++ EGLVHVS I+ GM+ D  K V R Q  KVK++S  G ++ L++KEV+Q TG DL+P R  +   K  E+L+++
Sbjct:  164 EQPSGPELYGIYEGKVTKIMNFGVFVEIDA-PGGGSGYDRKSEGLVHVSHIRAGMVTDPGKEVSRNQVVKVKIISMTGNKMSLTMKEVDQRTGADLMPARSRDGLAKATEDLKNS 277          
BLAST of mRNA_S-dermatodea_contig10104.71.1 vs. uniprot
Match: A0A0C4ERG8_PUCT1 (S1 motif domain-containing protein n=1 Tax=Puccinia triticina (isolate 1-1 / race 1 (BBBD)) TaxID=630390 RepID=A0A0C4ERG8_PUCT1)

HSP 1 Score: 101 bits (251), Expect = 1.540e-22
Identity = 54/107 (50.47%), Postives = 70/107 (65.42%), Query Frame = 0
Query:   11 DAQPELYGIYDGSVSKIADFGCFVELRGFPSLPNGKRLEGLVHVSQIQNGMLRDASKAVKRGQPCKVKVVSQAGGRLGLSIKEVNQTTGEDLLPERGHEAAIKLAEE 117
            D +P LY IYDG+V+ I DFGCFV L+G        + EGLVHV+ I  G +   S  V RGQP KVKVVS AG R+G+S+K+V+Q TG DL P    ++  ++AEE
Sbjct:  235 DTRPVLYKIYDGTVASIKDFGCFVTLKGVAG-----KAEGLVHVNAIAAGRVNHPSDLVSRGQPVKVKVVSIAGERIGISMKDVDQNTGADLTPHLRIKSDAEMAEE 336          
BLAST of mRNA_S-dermatodea_contig10104.71.1 vs. uniprot
Match: A0A7S2TVY2_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TVY2_9EUKA)

HSP 1 Score: 95.9 bits (237), Expect = 1.610e-22
Identity = 51/105 (48.57%), Postives = 69/105 (65.71%), Query Frame = 0
Query:    2 GAVEKRGQRDAQPELYGIYDGSVSKIADFGCFVELRGFPSLPNGKRLEGLVHVSQIQNGMLR--DASKAVKRGQPCKVKVVSQAGGRLGLSIKEVNQTTGEDLLP 104
            G+  +R  R  +PE +GIYDG++SK+ DFG FV L GFP      R+EGLVHVS I+ G  R  +    ++RGQ  KVKV+S    ++ LS+++VNQ TGEDL P
Sbjct:   31 GSDRRRRPRGDKPEKFGIYDGTISKVMDFGAFVSLDGFPG-----RVEGLVHVSAIRPGGSRIMNLKDELRRGQKVKVKVISMTTTKISLSMRDVNQKTGEDLRP 130          
BLAST of mRNA_S-dermatodea_contig10104.71.1 vs. uniprot
Match: A0A5B0NC30_PUCGR (RNA helicase n=1 Tax=Puccinia graminis f. sp. tritici TaxID=56615 RepID=A0A5B0NC30_PUCGR)

HSP 1 Score: 100 bits (250), Expect = 2.360e-22
Identity = 56/107 (52.34%), Postives = 71/107 (66.36%), Query Frame = 0
Query:   11 DAQPELYGIYDGSVSKIADFGCFVELRGFPSLPNGKRLEGLVHVSQIQNGMLRDASKAVKRGQPCKVKVVSQAGGRLGLSIKEVNQTTGEDLLPERGHEAAIKLAEE 117
            D +P LY IYDG+V+ I DFGCFV L+G     +GK  EGLVHV+ I  G +   S  V RGQP KVKVVS AG R+G+S+K+V+Q TG DL P    +   ++AEE
Sbjct:  235 DTRPVLYKIYDGTVASIKDFGCFVTLKGV----SGKA-EGLVHVNAIAAGRVNHPSDLVSRGQPVKVKVVSIAGERIGISMKDVDQNTGADLTPHLRIKTDAEMAEE 336          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10104.71.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LEZ0_9PHAE6.150e-5381.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LN25_ECTSI2.450e-3969.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YV72_9STRA7.600e-3864.55Putative pre-mRNA-splicing factor ATP-dependent RN... [more]
A0A7S3MIU8_9STRA2.910e-3253.04Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A7S1XM15_9STRA5.030e-2850.44Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S2WCN0_9STRA1.920e-2754.63Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S2MKF0_9STRA5.100e-2345.22Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A0C4ERG8_PUCT11.540e-2250.47S1 motif domain-containing protein n=1 Tax=Puccini... [more]
A0A7S2TVY2_9EUKA1.610e-2248.57Hypothetical protein (Fragment) n=1 Tax=Lotharella... [more]
A0A5B0NC30_PUCGR2.360e-2252.34RNA helicase n=1 Tax=Puccinia graminis f. sp. trit... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022967RNA-binding domain, S1SMARTSM00316S1_6coord: 15..92
e-value: 3.1E-9
score: 46.7
NoneNo IPR availableGENE3D2.40.50.140coord: 11..103
e-value: 6.4E-24
score: 85.9
IPR003029S1 domainPFAMPF00575S1coord: 19..80
e-value: 1.5E-5
score: 25.3
IPR003029S1 domainPROSITEPS50126S1coord: 17..92
score: 13.632
IPR037320Nucleolar protein of 40kDaPANTHERPTHR15838FAMILY NOT NAMEDcoord: 5..105
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 18..102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10104contigS-dermatodea_contig10104:452..1980 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10104.71.1mRNA_S-dermatodea_contig10104.71.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig10104 452..1980 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig10104.71.1 ID=prot_S-dermatodea_contig10104.71.1|Name=mRNA_S-dermatodea_contig10104.71.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=121bp
GGAVEKRGQRDAQPELYGIYDGSVSKIADFGCFVELRGFPSLPNGKRLEG
LVHVSQIQNGMLRDASKAVKRGQPCKVKVVSQAGGRLGLSIKEVNQTTGE
DLLPERGHEAAIKLAEELRSN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022967S1_dom
IPR003029S1_domain
IPR037320pNO40
IPR012340NA-bd_OB-fold