prot_S-dermatodea_contig10091.63.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig10091.63.1
Unique Nameprot_S-dermatodea_contig10091.63.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length91
Homology
[Close]
BLAST of mRNA_S-dermatodea_contig10091.63.1 vs. uniprot
Match: A0A6H5JRL3_9PHAE (C2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL3_9PHAE)

HSP 1 Score: 91.7 bits (226), Expect = 1.300e-19
Identity = 44/91 (48.35%), Postives = 66/91 (72.53%), Query Frame = 0 
Query:    1 MHKLDVRLGSTKKIPLFFNEVGKRLLEKSGPVLQSKVERVGMDLIKVRVLFHPLHAKNTVLMVSALSLHMLFQLWLYHTGRFNLYLLLVCV 91
            + +L  RLGSTK++P   N++GK    KSGP +Q  ++++G+ LIK+R  FHPLHA++  + ++AL  HM+ QLWLY +GRFNLY +L+ V
Sbjct:  639 LRELYERLGSTKRVPAVVNQLGKVFFTKSGPSMQLGLDKMGVMLIKIRQRFHPLHARDLGVTMTALFAHMVLQLWLYVSGRFNLYFVLLVV 729
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10091.63.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JRL3_9PHAE1.300e-1948.35C2 domain-containing protein n=1 Tax=Ectocarpus sp... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..59
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 60..78
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 79..91

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10091contigS-dermatodea_contig10091:1481..7439 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10091.63.1mRNA_S-dermatodea_contig10091.63.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig10091 1481..7441 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig10091.63.1 ID=prot_S-dermatodea_contig10091.63.1|Name=mRNA_S-dermatodea_contig10091.63.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=91bp
MHKLDVRLGSTKKIPLFFNEVGKRLLEKSGPVLQSKVERVGMDLIKVRVL
FHPLHAKNTVLMVSALSLHMLFQLWLYHTGRFNLYLLLVCV
back to top