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Homology
BLAST of mRNA_S-dermatodea_contig10091.63.1 vs. uniprot
Match: A0A6H5JRL3_9PHAE (C2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL3_9PHAE) HSP 1 Score: 91.7 bits (226), Expect = 1.300e-19 Identity = 44/91 (48.35%), Postives = 66/91 (72.53%), Query Frame = 3
Query: 3 MHKLDVRLGSTKKIPLFFNEVGKRLLEKSGPVLQSKVERVGMDLIKVRVLFHPLHAKNTVLMVSALSLHMLFQLWLYHTGRFNLYLLLVCV 275
+ +L RLGSTK++P N++GK KSGP +Q ++++G+ LIK+R FHPLHA++ + ++AL HM+ QLWLY +GRFNLY +L+ V
Sbjct: 639 LRELYERLGSTKRVPAVVNQLGKVFFTKSGPSMQLGLDKMGVMLIKIRQRFHPLHARDLGVTMTALFAHMVLQLWLYVSGRFNLYFVLLVV 729
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 69.7 |
| Seed ortholog evalue | 7.9e-10 |
| Seed eggNOG ortholog | 2880.D7G4V0 |
| KEGG ko | ko:K04868,ko:K15712,ko:K19728 |
| KEGG TC | 8.A.16.2.2 |
| KEGG Pathway | ko04010,ko04260,ko04261,ko04921,ko05410,ko05412,ko05414,map04010,map04260,map04261,map04921,map05410,map05412,map05414 |
| EggNOG free text desc. | Protein kinase c |
| EggNOG OGs | KOG0696@1,KOG0696@2759 |
| Ec32 ortholog description | hypothetical protein |
| Ec32 ortholog | Ec-19_005280.2 |
| EC | 2.3.2.27 |
| COG Functional cat. | T |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko01000,ko04040,ko04121,ko04131 |
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 277 |
| Cds size | 273 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622924138.6551974-UTR-S-dermatodea_contig10091:7439..7441 | 1622924138.6551974-UTR-S-dermatodea_contig10091:7439..7441 | Saccorhiza dermatodea SderLu1190fm monoicous | UTR | S-dermatodea_contig10091 7440..7441 - |
| 1694079043.7971206-UTR-S-dermatodea_contig10091:7439..7441 | 1694079043.7971206-UTR-S-dermatodea_contig10091:7439..7441 | Saccorhiza dermatodea SderLu1190fm monoicous | UTR | S-dermatodea_contig10091 7440..7441 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig10091.63.1 >prot_S-dermatodea_contig10091.63.1 ID=prot_S-dermatodea_contig10091.63.1|Name=mRNA_S-dermatodea_contig10091.63.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=91bp
MHKLDVRLGSTKKIPLFFNEVGKRLLEKSGPVLQSKVERVGMDLIKVRVL
FHPLHAKNTVLMVSALSLHMLFQLWLYHTGRFNLYLLLVCV back to topmRNA from alignment at S-dermatodea_contig10091:1481..7441- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-dermatodea_contig10091.63.1 ID=mRNA_S-dermatodea_contig10091.63.1|Name=mRNA_S-dermatodea_contig10091.63.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=5961bp|location=Sequence derived from alignment at S-dermatodea_contig10091:1481..7441- (Saccorhiza dermatodea SderLu1190fm monoicous)
AGATGCACAAGCTGGACGTGAGGCTAGGCAGCACGAAGAAGATTCCGCTG
TTTTTTAACGAGGTCGGCAAACGCTTGCTGGAGAAGAGCGGGCCCGTGTT
GCAGAGCAAGGTATGTCGCTGTTGTATTACTTGAGCACTTGCTGTGTAGG
GCAGTTTATTTTGTCGTGGGGGGGGAGTTGGGTAAAAAAACGACATCAAT
GAATCATTGCATAATATAGCACTTCTTGCTTTTGTCGACCGCTTAAAGAC
AGGTGCAACGCACCGCGATCGGTACCTGCGTCCGCCCTTGTCGACCCAGT
GCGTGTTCGATCCCCAACCAATCAACCATAACTACAGACTTCTTGTTCAA
AACATCCCCGATGTAATGTGATAGGTTGGGCTGGGTAGGGTAGGTAGGTT
GGATTGGGCTGGGCTGGGCTGGGTTGGGTAGGGTTGGGTTGTAGCCTGGC
GGCGCTTGAGCCCGTTGTTCACCTCTCTTGTCAGCGCCGCAACGCGTCAG
CTAGCATCCATGGGGGGTGGCTGCCAGGCGTGAGCGTCGATGTAGGCCAA
ACCCCACTGCCGCGCTAGAATGCATACCGCCATGATCATCCGCCAAATAT
CATCTGTGAAACTCGCCACCGAGCTGTCAAGCGGTAAAACAGATGGACCA
ACTTTGTTTTTAGAGGTTTGATTCATGAATCGATTTGAGTTGGTTGATTG
ATTGACACATATATATATATATTTAATCACACTTACAACCGACCGTGTAC
CGCCAAGTGGTTGCCGATGCCGCCGGCTCGTGGTGATATGATGTATCGAG
TAAATTGAAAACACCTGTCACGAAAATAGATAAAGAGCTCCAGGAGTGGC
ACAGTATAGAAATAACATGACACTCGGAATCAGAGAGGGTGCCCGTTTTC
GTTTTATTTTGCTTCGCCTTTTAGCGGAGAGATGTGTCGCTCATGATGAA
GAAAAGCTCACCCCCGACGACTACTGGCATCACAAACCCTTACCGCCTCA
CTTCGTCTATCGTATTGCAGAGGTACACAGTAATCGGGACAAAACGCGGC
CGAACATTTTGCCCAACATAGCAAACCCCTTTAAAGATAGGGGGGGGGGG
AGGGGGGTTGTACCTCGGGAGTTACAATTTCTAAATTGATACCCGAGGAG
TCAAGTCTGGAACAACTCTAGTGATGTTGCGGCGCTTTCGTTCCCCAATA
TCTTCGGGTTTGGAGTTTATTAGAGGCCCCGGCCGTTTCACGTGGGACCA
GACACTCGGGTGTCTAGAGTATGCCACGACAAACTACCTTATAGATTAAA
AACATACTGTCACACCAAAATACTGAGCGCTGAAGGATGTAGTGATAACA
AGCTGGGGGCGAAGCCCATATGAGTGTGGGCCGATATATAAATTGATCAA
CTCGAAGCGGGAGATTTAGTAGTGCTTCACGAAAGTTCCCCCGCTTCCCA
GTACGTTATTTTCAATATCACATGCTGGTAAACATATGAGTGGCATCTCC
AAGTCCGAATCACTACGACGAGGACACCGGCATGTCTAGCCATCGGAAGA
AGTCAACGTACCCAATCGGCAGCCATCTTCAATATAGTACATAGGATAGG
ACTATAGCAGGACCCACAGCATCGTATGTACTGTAGGCTTCCACCAGGGG
AACAATACTGAATACAGTACGATGGTATTATAACAGCACCCCATAGCAAA
ATATATAACGTAGGCTTCCACTGCGTTAGATTGGCCCATCTGTTTCCTCT
ACCAAAAATGTTGGACCCCAATGCTAGTTCTGTGTTTATAAATATTTACT
GTCTTCAGAGGGGGGATTGTCTGCGTCGAACAGCAAGGCTCAATCAAAAG
AGAATCAATACAATAAGAGCATGTGGTAGGAAAGGAACATATAATCTTCT
TGGCTCATAAACACGCAGCAAAGATACATCACCAGGACACACCTCAGGAC
AAAGACTCATGTCCTGTATGATACCATAACCATATAACGTCATACATGAT
AAGACACCACAGGATCATTTGTAACACGTGGGCCTCCACAGGTGTAGCTT
GGACCACCTTTCCTCTTGAAAAGGTGGGACCCCAAAGCTCGCTCGATGTG
TCTGAAATCTTTATTTGTTTAGGGGTGTTGTCTGCCGGCAGCCACAATGG
CATGTTGCAACCCGTTCCAAGATGTTGGTTGGACCTGGTGATTTCGGAAC
GGGATCAGAGATGGGCTGACCAATCAGGCGCGAGCACAGGAAAATGGAAA
AACGCCTCCTGACTCCTGCGCGACAGACAAAATTCGATGTTCTTACCCCC
CCCCTATCTGCTTTGAATTACTCAGCAAACCATACTATAAATGAACATGT
TCTGGCCTTACAACATCTGCAATAATCCGAGCTGACGTGTCAAATCAAGA
GCTACAGTAGAAACAATATTACAAGGTGTTCGGGCCGAAGGTTAAAAAAA
ACACAGACACGCATACGCTGTTCAGCAGAAATTTTCTCCTGATTACTACT
GTGTACCTCCATAAATAACGCTTGTTCCTGTGGAACTCCAGCCTGAGAGG
AGCCCTTCTAATTATATTTCTTTTTTCCCCTTGTTAACGGAGAGGCGCGA
CGCTGATACATCGACGAAGGGTAATCCCTGACGACGGTGAGAGACAGTTA
CCGCCCGCCCCGGTCCATCATTGATTATAGCGCCATCATGAATCATAACG
CCCATTCAGCGTCGTTCAGCACTCCAGGGACATGACGAGCATCAAAGCAC
CAGCCGCCAGCCACATTAAAAACAAGCTACAATCGCATAAGCCCTCCCGA
CCCTGGCTCTGCCTCGCCCCTACACATGGCAGTATCCAATGCTTATAACG
CCGTCACTCGCGTCTTGTGGAACTCCGTCCAGGTGGAGAGGGTGGGGATG
GACCTCATCAAGGTGCGCGTGCTGTTTCACCCTTTGCACGCGAAGAACAC
GGTGCTCATGGTTTCGGCCCTCTCCCTGCACATGCTGTTCCAGCTCTGGC
TGTACCACACGGGAAGGTGCGCGAGTGACAAGTGCGGAGCGACCGCCGCA
TCTGTGTGCTTGGTTGGATAGTTTCATGTAGGGTTCTTAGATGGGTTGGT
TGACTGATTCGGAATTAATCTCCGTGTTTACTTTTGTCTCATAGGTCCGA
CTAACCTAGTTGTTATCTTTATTCATAACTAGGGCTTTGATAACGTTTTT
AAATAGCGATTTAGTGTACGATTTTGAGGCCGAGTTTTGCACAGTTACCA
TATGTACGATTTTGAGTGATGCCAAACAACTTGATGTTTGTGTTGAGCGA
CCTCGGACACCTCAAAATAGTTGGATCTACCACCTCACGGGCGTAGCCGT
GACTATCTACTACAATAGTTGTATGTAAAAACGTAACCGCTGCGTGGTCA
GATGAGATTGTGGTGAGATGAGATTGTGATGATGATAATGGTTGTGGTTG
GTTTGTCTCGTTTGGCCTTTGGTCTCGCAATTTCTCTTGTTTCGGAGAAA
GTTCGGCCGTAGTTGTTGTTATGCCAAATTATCAACGAATTAAAAGATGG
GGGAAAAAAAAAAACGAGACAGAACAAAACAGAACAGAACAGAACACTCG
CCAAAATTTTGTATTGCCAAAAAAGCTTTTGCATGCGAGAACGCCTGTTT
CAGACAAGTAAACACTGGCAGACGTCAACAAATATTTTGTCTTGAGTAAA
GCGCAAGATGGCGGGAAGTGGCACGCTCAAACTTACTGTATCGTATTTCC
ACTATACTTGTACTATGGTTTTTGATAGTATATTGAAAACATGACATTTT
CTACCAGATTGGGTTTGAGCTGAGCATGGTCAGCGCTGCCTATTACAGAG
GTACACAGTAATCAGAAGGAAAATGTGTCCAACAGCATGCCCAGCAGAAC
AAACCACAAACCCATCTGGTCTGTCCTTTTGATGCAACATGTGCAGGATT
TCAGAACTGACTGAAATCTGAGTTTTGTATGAGCGAGAGTACCAGTCTGT
TTGATCGTTCCGAGGATCGTTCTGAGAGTGCCACTATCCCGAAGTGTAGC
CACCCTGGGCAGTCTGTTTTGCTGCACGCTAGCGCGTGACGCTAACGTGG
CAACACGGGAGACCTGACTGTAGAGGCAGTCCAGCCCGTTGACGGAGAAA
CCGCTGTGAAGCCAGCAAGGCTGCAGCCCCTCGGTCAATTGAGCAACTGC
GGTTTAGAATCGTTGAGCCCCAGTACACCGGAGTTCCCCGGTTGATTGAT
TTACCGGTGTTGTCGAGCCAAGAAGGCTCATATTTATCGAACCAAGAGGG
CTTATGTTTCCCGGTTTCATATTTCGACCTGAAATATCAAATCAAATCCT
AAATATATATATATCAAGGTGTTCGGGACAACGTTAAAAAACAAGACCCG
ACTTGAGTGTGTACGCTATGCATTCAGCAAAAAAATGATCCTGACTGCTC
TGTGTACCTCCTTTATAGGAGTGTCTTCGAGTGCGAACGCGGTGTGCCAC
AATTATAAGAGGAGTGTTGGTGTTGTACGAAGCGCATCGTGAGAGGCCAG
GCCCGCAAGGACATGGCGTAAATCACAGAATGCCCTACAATATATGTGGG
TGCGCAAAACTCCGAGGAAGAAGAAATTTCCTCCAAAAAAACGCCCCCCG
TTTTCGGCTTCGAAAGCAGGCCCTCTTGCGTCTGTTTGGTTACCGCCTTT
GATTGTTTATTTTTGGCAAGACTTTGTCATCTATCCACGAACGAGATGTT
AGGCTTATCGTTCGTAAGCACGACAATCAATCAATCAATCAAGCAATCAT
GTTGCAAGCAATCCAGAATGTTTCGAACCAATCAATCAAATATTATCAAC
CAACCAATCATCGTGGAGACCCGCTTTTTAGCTTTACTGTCCACCATTGC
CCAGAGTCGAAAAGAGCTGTGTGTGGCACTTACGGGGGGAATCGTTGAGG
CGCTGGTCGGTCTATCGCAATTAGTTATCGTTTCTTAACTACGACACTTC
CAATCGACCGGCCCGCCAAGGTTGCCCATCGCCCGTGTGGTCCTACGAGG
AATCGTGAATTTGATACAAGCTAGTACGTTATCGAATGATCTATACATAC
CAAAGAACGAAACCAGCCCATTAAATGAAATGCTAGCAACGATCAACGGC
CTCATATCCTCAGGAGGCTCGTGATTTTGCTGGCGCGGCCGGTGGTGTGT
AAGGGGTTCGCGCCACGGCTACCGCTACAGACGCCTATCGCGGAGGTACA
CAGAATTAACAGGAGCAAACCGAATTTACGAAACGTCTTTCTCAACGATA
AAATAAACGAACACCTGAAACATTTCAGTCTGGCCTAAGAGCTCTCCAGA
CAGCAGCAGCACCCTAAGCAATCTTCCGAGCAAGCTTCGTGCCTTCTATA
CACTGTATAGAGGAAAAACTAAACTAAACGTTCCGAAGAACACGCTCGGG
GGCATTGGTGGTTTCGTTAGCAACTCGGTATTTGGGTCTGTTGACTTGTG
GTCCACCGTATTAGCACAGCCAGCTTCGAAAGCAAGCAAAGCAATGTTGT
GTAGGGCAACGGATTCCCTGAGACATTTCCTGGTTTTTGCGCTCACGGGA
TAGATGCAATGGCGGCGGATGCGCCTTCTGACTCGAGTCGGAAGAAGATA
CAACAACGCGTACGCGACAGCATCGTGCACACGAAAAAAGCCCAACTTTA
ACGTTTTTTGCCTGAATGAACTGGTTGTATAATATAAACGATGAGACTGA
AAAATATCAAAACGGCTTGACCAAAACGCCCGACAAAACGCTTATTTTAT
TATGTAAACTCGTTGTTACCGCATGAGGTGAGCGGCTCTGGTGCTCCACG
CCCTTTTTGACCCCCCCCGCCCCCCTCCCCCCCCCCCAACCCCTTCCTCG
CCGTCGATCTGCTGCCCATCTCGAACAAAGGTTCAACCTCTACCTGCTTC
TCGTGTGCGTG back to topCoding sequence (CDS) from alignment at S-dermatodea_contig10091:1481..7441- >mRNA_S-dermatodea_contig10091.63.1 ID=mRNA_S-dermatodea_contig10091.63.1|Name=mRNA_S-dermatodea_contig10091.63.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=546bp|location=Sequence derived from alignment at S-dermatodea_contig10091:1481..7441- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGCACAAGCTGGACGTGAGGCTAGGCAGCACGAAGAAGATTCCGCTGTT
TTTTAACGAGGTCGGCAAACGCTTGCTGGAGAAGAGCGGGCCCGTGTTGC
AGAGCAAGATGCACAAGCTGGACGTGAGGCTAGGCAGCACGAAGAAGATT
CCGCTGTTTTTTAACGAGGTCGGCAAACGCTTGCTGGAGAAGAGCGGGCC
CGTGTTGCAGAGCAAGGTGGAGAGGGTGGGGATGGACCTCATCAAGGTGC
GCGTGCTGTTTCACCCTTTGCACGCGAAGAACACGGTGCTCATGGTTTCG
GCCCTCTCCCTGCACATGCTGTTCCAGCTCTGGCTGTACCACACGGGAAG
GTGGAGAGGGTGGGGATGGACCTCATCAAGGTGCGCGTGCTGTTTCACCC
TTTGCACGCGAAGAACACGGTGCTCATGGTTTCGGCCCTCTCCCTGCACA
TGCTGTTCCAGCTCTGGCTGTACCACACGGGAAGGTTCAACCTCTACCTG
CTTCTCGTGTGCGTGGTTCAACCTCTACCTGCTTCTCGTGTGCGTG back to top
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