prot_S-dermatodea_contig10.3.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig10.3.1
Unique Nameprot_S-dermatodea_contig10.3.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length148
Homology
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BLAST of mRNA_S-dermatodea_contig10.3.1 vs. uniprot
Match: D7FJD9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJD9_ECTSI)

HSP 1 Score: 163 bits (412), Expect = 2.600e-48
Identity = 85/144 (59.03%), Postives = 106/144 (73.61%), Query Frame = 0 
Query:    7 SYRPTEIKFKFHVKEPLRQVVIYSKPTWSLPISKVVEARAFVTQANHRLNVGSLDLDDCG--SISFKTAAEFGGINDISPVLSSFMEAHASSGMDCFRALESIKDQDANAQDAVSFISRRGTSAE---GVDDKLSKMLSVLAQP 145
            +Y P + KF FH+K+PLRQV+IYSKP WSLP  ++   R FV+QANHRLNVG+L++DD    S+SFKTAAEFGGINDI+PVL+SFM+AHA  G+DCFRAL +IK  D +   A+  I   G + E     DDKLS MLSVL+ P
Sbjct:   50 TYDPVQFKFTFHIKQPLRQVIIYSKPQWSLPTRQIHAVRQFVSQANHRLNVGTLEVDDSADVSVSFKTAAEFGGINDITPVLTSFMKAHAGVGLDCFRALTAIKYADVDVTHALGMIGMVGPTGEMSTQADDKLSAMLSVLSAP 193
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BLAST of mRNA_S-dermatodea_contig10.3.1 vs. uniprot
Match: A0A6H5LCM9_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCM9_9PHAE)

HSP 1 Score: 169 bits (427), Expect = 1.930e-46
Identity = 87/144 (60.42%), Postives = 107/144 (74.31%), Query Frame = 0 
Query:    7 SYRPTEIKFKFHVKEPLRQVVIYSKPTWSLPISKVVEARAFVTQANHRLNVGSLDLDDCG--SISFKTAAEFGGINDISPVLSSFMEAHASSGMDCFRALESIKDQDANAQDAVSFISRRGTSAE---GVDDKLSKMLSVLAQP 145
            SY P + KF FH+K+PLRQV+IYSKP WS+P  ++   R FVTQANHRLNVG+L++DD    S+SFKTAAEFGGINDI+PVL+SFM+AHA  G+DCFRAL +IKD D +   A+  I   G + E     DDKLS MLSVL+ P
Sbjct:  508 SYNPVQFKFTFHIKQPLRQVIIYSKPQWSMPTRQIHAVRQFVTQANHRLNVGTLEVDDSADVSVSFKTAAEFGGINDITPVLTSFMKAHAGIGLDCFRALTAIKDADVDVNYALGMIGMVGPTGEMSTQADDKLSAMLSVLSAP 651
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FJD9_ECTSI2.600e-4859.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LCM9_9PHAE1.930e-4660.42HTH CENPB-type domain-containing protein n=1 Tax=E... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10contigS-dermatodea_contig10:886..4807 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10.3.1mRNA_S-dermatodea_contig10.3.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig10 813..5609 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig10.3.1 ID=prot_S-dermatodea_contig10.3.1|Name=mRNA_S-dermatodea_contig10.3.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=148bp
MDADRGSYRPTEIKFKFHVKEPLRQVVIYSKPTWSLPISKVVEARAFVTQ
ANHRLNVGSLDLDDCGSISFKTAAEFGGINDISPVLSSFMEAHASSGMDC
FRALESIKDQDANAQDAVSFISRRGTSAEGVDDKLSKMLSVLAQPTY*
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