mRNA_S-dermatodea_contig8836.16962.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig8836.16962.1
Unique NamemRNA_S-dermatodea_contig8836.16962.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig8836.16962.1 vs. uniprot
Match: A0A6H5KLH5_9PHAE (PseudoU_synth_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLH5_9PHAE)

HSP 1 Score: 239 bits (609), Expect = 3.300e-71
Identity = 139/233 (59.66%), Postives = 157/233 (67.38%), Query Frame = 1
Query:    1 PVSGAMCIARTSKAAARLSATFRARDGVEKIYHAVVHGQLSGSGTRKDFLASPGGSGAGGVRGGRGPRTTVA-----------------------KLAVLEWEAIALSPSRSSLLRCPRTGDPRTLVRLRLVTGRKHQIRVQLAEMGHPVVGDVRYGR----RSHGGGGSGPG-------GRWDALEDRSILLHASELALPHPTRPEEVVRVVAPPPESWGELCGTEVVSEGF 597
            PVSG MC+ARTSKAAARLSA+FRARDGVEKIYHAVV G L+G G R+DFL SP  SGA   R GRGPRT ++                       KLA LEWEAI +SPS +  LRCPRTG+PRTLVR+RL+TGRKHQIRVQLAEMGHPVVGD RYGR    +S GG  +          G  + LEDRSILLHASEL +PHPTR   +VR VA PP  W +LCG   + E F
Sbjct:  103 PVSGVMCVARTSKAAARLSASFRARDGVEKIYHAVVAGGLAGRGIRQDFLVSPDASGAV-ARRGRGPRTGLSSAPVRGGAGGRLLAAGPTSSSEGKLAQLEWEAIDVSPSSADRLRCPRTGNPRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYGRSSWCQSRGGDATDESAVPPPRAGSMEPLEDRSILLHASELIVPHPTRVGAMVRAVAAPPGMWSDLCGRSCIDEVF 334          
BLAST of mRNA_S-dermatodea_contig8836.16962.1 vs. uniprot
Match: D8LGZ5_ECTSI (23S RNA-specific pseudouridylate synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGZ5_ECTSI)

HSP 1 Score: 223 bits (568), Expect = 1.520e-66
Identity = 132/225 (58.67%), Postives = 148/225 (65.78%), Query Frame = 1
Query:   16 MCIARTSKAAARLSATFRARDGVEKIYHAVVHGQLSGSGTRKDFLASPGGSGAGGVRGGRGPRTTVA-----------------------KLAVLEWEAIALSPSRSSLLRCPRTGDPRTLVRLRLVTGRKHQIRVQLAEMGHPVVGDVRYGRRSHGGGGSGPG--------GRWDALEDRSILLHASELALPHPTRPEEVVRVVAPPPESWGELCGTEVVSEGF 597
            MC+ARTSKAAARLSA+FRARD VEKIYHAVV G L+G G R+D L SP  SGA   R GRGPR  ++                       KLA LEWEAI +S S +  LRCPRTG+PRTLVR+RL+TGRKHQIRVQLAEMGHPVVGD RYGR S GG  +           GR + LEDRSILLHASEL +PHPTR    VR VA PP  W +LCG   + E F
Sbjct:    1 MCVARTSKAAARLSASFRARDDVEKIYHAVVAGSLAGRGIRQDLLVSPDASGAV-ARRGRGPRAGLSSVPARGGAGGRLLAAGPTSSPDGKLAQLEWEAINVSSSSAVRLRCPRTGNPRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYGR-SRGGDATDESAVPPPRRAGRIEPLEDRSILLHASELIVPHPTRVGATVRAVAAPPGMWSDLCGRSCIDEVF 223          
BLAST of mRNA_S-dermatodea_contig8836.16962.1 vs. uniprot
Match: A0A848XZP8_9BACT (RNA pseudouridine synthase n=1 Tax=Rhodothermaceae bacterium TaxID=2026787 RepID=A0A848XZP8_9BACT)

HSP 1 Score: 109 bits (273), Expect = 6.230e-24
Identity = 78/186 (41.94%), Postives = 100/186 (53.76%), Query Frame = 1
Query:    1 PVSGAMCIARTSKAAARLSATFRARDGVEKIYHAVVHGQLSGSGTRKDFLASPGGSGAGGVRGGRGPRTTVAKLAVLEWEAIALSPSRSSLLRCPRTGDPRTLVRLRLVTGRKHQIRVQLAEMGHPVVGDVRYGRRSHGGGGSGPGGRWDALEDRSILLHASELALPHPTRPEEVVRVVAPPPESW 558
            PVSG M +ARTSKAA RLS  FR R  VEK Y A+V G++SG+G R+D+L      G   +     P+    K AVL W+A+      S             LV ++L+TGR HQ+RVQLA +G P++GD RYG                 L+ R++ LHA  LA  HP R E +V   APPP SW
Sbjct:   60 PVSGVMVLARTSKAAGRLSKAFRERR-VEKRYLALVEGRMSGAGEREDYLLKE--DGRVRIVSADHPK---GKRAVLRWQALGEEGRLS-------------LVEVKLLTGRAHQVRVQLAALGTPILGDFRYGATRE-------------LDGRNLALHAYRLAFEHPVRREPLV-FTAPPPVSW 212          
BLAST of mRNA_S-dermatodea_contig8836.16962.1 vs. uniprot
Match: A0A5S9IDS9_RHOMR (RNA pseudouridine synthase n=4 Tax=Rhodothermus marinus TaxID=29549 RepID=A0A5S9IDS9_RHOMR)

HSP 1 Score: 105 bits (263), Expect = 2.220e-22
Identity = 85/194 (43.81%), Postives = 103/194 (53.09%), Query Frame = 1
Query:    1 PVSGAMCIARTSKAAARLSATFRARDGVEKIYHAVVHGQLSGSGTRKDFLASPGGSGAGGVRGGRGPRTTV------AKLAVLEWEAIALSPSRSSLLRCPRTGDPRTLVRLRLVTGRKHQIRVQLAEMGHPVVGDVRYGRRSHGGGGSGPGGRWDALEDRSILLHASELALPHPTRPEEVVRVVAPPPESWGE 564
            PVSG M +ARTSKAAARL   FR R  VEK+Y A+V G+L GSGT +DF+A             R     V       K AVL W+A+    +R+ L          TL+RL   TGRKHQIRVQLA  G+P++GD RY  R           RW  L    + LHA +LAL HPTR E + +  AP P  W E
Sbjct:   66 PVSGVMVLARTSKAAARLMQQFRERT-VEKVYLALVEGELEGSGTWEDFMAPA-----------RDHMRLVPEDHPFGKRAVLHWQALM---TRNGL----------TLMRLVPETGRKHQIRVQLAFRGYPILGDRRYRAR-----------RW--LAPGQMALHAWKLALTHPTRRERM-QWTAPVPPFWDE 220          
BLAST of mRNA_S-dermatodea_contig8836.16962.1 vs. uniprot
Match: A0A1V0DAH3_9BACT (RNA pseudouridine synthase n=2 Tax=Bacteroidetes TaxID=976 RepID=A0A1V0DAH3_9BACT)

HSP 1 Score: 103 bits (258), Expect = 9.040e-22
Identity = 80/195 (41.03%), Postives = 98/195 (50.26%), Query Frame = 1
Query:    1 PVSGAMCIARTSKAAARLSATFRARDGVEKIYHAVVHGQLSGSGTRKDFLASPGGSGAGGVRGGRGPRTTV-------AKLAVLEWEAIALSPSRSSLLRCPRTGDPRTLVRLRLVTGRKHQIRVQLAEMGHPVVGDVRYGRRSHGGGGSGPGGRWDALEDRSILLHASELALPHPTRPEEVVRVVAPPPESWGE 564
            P SG M +ARTSKAA RLS  FR R   EK Y A+V G+L+G GT  D LA             R     V       A+ AVL+W+A+A             TG   TLV + L TGR HQIRVQ A  GHP++GDVRYG R               L+ R + LH+  LA+ HPT  E +    +PPP SW +
Sbjct:   62 PASGVMVLARTSKAARRLSQQFRERTP-EKRYLALVEGRLAGRGTWVDHLAK------------RNRHVHVVHAGAEDARRAVLDWQALA------------STGGC-TLVEVALHTGRAHQIRVQCAHRGHPILGDVRYGARR-------------VLDGRHLALHSYRLAIDHPTTKERMAWSASPPP-SWAQ 216          
BLAST of mRNA_S-dermatodea_contig8836.16962.1 vs. uniprot
Match: A0A271J2Z8_9BACT (PseudoU_synth_2 domain-containing protein n=1 Tax=Rubrivirga marina TaxID=1196024 RepID=A0A271J2Z8_9BACT)

HSP 1 Score: 103 bits (256), Expect = 1.630e-21
Identity = 78/192 (40.62%), Postives = 97/192 (50.52%), Query Frame = 1
Query:    1 PVSGAMCIARTSKAAARLSATFRARDGVEKIYHAVVHGQLSGSGT---RKDFLASPGGSGAGGVRGGRGPRTTVAKLAVLEWEAIALSPSRSSLLRCPRTGDPRTLVRLRLVTGRKHQIRVQLAEMGHPVVGDVRYGRRSHGGGGSGPGGRWDALEDRSILLHASELALPHPTRPEEVVRVVAPPPESWGEL 567
            P SG M +ARTSKAA+RLS  FR R   +K Y AVV G     G    R D +   GG     V  G G R      A L +  +A   +RS             LV + L+TGRKHQIR QLAE+G P++GD RYG ++               + R + LHA  L + HPT+  E V VVAPPPE+W  L
Sbjct:   60 PASGVMMLARTSKAASRLSDQFRRRVP-QKRYLAVVEGDPGDGGAWTERVDAIDKGGGGSVDVVPVGEGQR------AALRYRTLARDSARS-------------LVEVELLTGRKHQIRAQLAELGAPILGDFRYGNQT------------PFADGRGVALHAYRLVVEHPTK-REPVTVVAPPPEAWAGL 218          
BLAST of mRNA_S-dermatodea_contig8836.16962.1 vs. uniprot
Match: A0A800M4B4_9BACT (RluA family pseudouridine synthase n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A800M4B4_9BACT)

HSP 1 Score: 103 bits (256), Expect = 1.860e-21
Identity = 83/191 (43.46%), Postives = 100/191 (52.36%), Query Frame = 1
Query:    1 PVSGAMCIARTSKAAARLSATFRARDGVEKIYHAVVHGQLSGSGTRKDFLASPGGSGAGGVRGGRGPR----TTVAKLAVLEWEAIALSPSRSSLLRCPRTGDPRTLVRLRLVTGRKHQIRVQLAEMGHPVVGDVRYGRRSHGGGGSGPGGRWDALEDRSILLHASELALPHPTRPEEVVRVVAPPPESWG 561
            PV GAM IARTSKAA+RL+  FR R   EK Y A+V G+L GSG   D+L           RG R  R    T  AK AV+ W       SRS L         R+LV + L TGR HQIRVQL+ +GHP+VGD+RYG  +  G G            R I LHA+ L + HPT+ +      APP   WG
Sbjct:   62 PVGGAMVIARTSKAASRLAEQFRQRTP-EKRYLAMVEGRLDGSGRETDWLLKT----RDPKRGTRVKRVRQGTDGAKRAVMTWT------SRSVL-------GTRSLVEVGLETGRAHQIRVQLSGLGHPIVGDLRYGAEAPLGDG------------RGIALHATHLTIEHPTKRDRRTFTSAPP-RVWG 221          
BLAST of mRNA_S-dermatodea_contig8836.16962.1 vs. uniprot
Match: A0A1M6P7L7_9BACT (Ribosomal large subunit pseudouridine synthase D n=1 Tax=Rhodothermus profundi TaxID=633813 RepID=A0A1M6P7L7_9BACT)

HSP 1 Score: 102 bits (255), Expect = 2.780e-21
Identity = 84/192 (43.75%), Postives = 101/192 (52.60%), Query Frame = 1
Query:    1 PVSGAMCIARTSKAAARLSATFRARDGVEKIYHAVVHGQLSGSGTRKDFLASPGGSGAGGVRGGRGPRTTVA------KLAVLEWEAIALSPSRSSLLRCPRTGDPRTLVRLRLVTGRKHQIRVQLAEMGHPVVGDVRYGRRSHGGGGSGPGGRWDALEDRSILLHASELALPHPTRPEEVVRVVAPPPESW 558
            PVSG M +ARTSKAAARL   FR R  VEKIY A+V G+L G G  +DF+A             R     V+      K AVL WEA+    +R+ L          TLVRL   TGRKHQIRVQLA  G+PV+GD RY  R           RW  L    + LHA +L++ HPTR E + +  AP P  W
Sbjct:   66 PVSGVMVLARTSKAAARLMQQFRERT-VEKIYLALVEGELEGEGVWEDFIAPA-----------RDHMRLVSADHPWGKRAVLRWEALM---TRNGL----------TLVRLIPETGRKHQIRVQLAFRGYPVLGDRRYRAR-----------RW--LAPGQMALHAWKLSVTHPTRRERM-QWTAPVPSCW 218          
BLAST of mRNA_S-dermatodea_contig8836.16962.1 vs. uniprot
Match: UPI001420CA78 (RNA pseudouridine synthase n=1 Tax=Rhodocaloribacter litoris TaxID=2558931 RepID=UPI001420CA78)

HSP 1 Score: 102 bits (254), Expect = 2.990e-21
Identity = 79/192 (41.15%), Postives = 99/192 (51.56%), Query Frame = 1
Query:    1 PVSGAMCIARTSKAAARLSATFRARDGVEKIYHAVVHGQLSGSGTRKDFLASPGGSGAGGVRGGRGPRTTVA-----KLAVLEWEAIALSPSRSSLLRCPRTGDPRTLVRLRLVTGRKHQIRVQLAEMGHPVVGDVRYGRRSHGGGGSGPGGRWDALEDRSILLHASELALPHPTRPEEVVRVVAPPPESWG 561
            P SG M +ARTSKAAARLS  FR R   EK Y A+V G  +G+GT  D L          V+ GR  R   A     + A L W  +A   +           +  +LV +RL TGR HQ+RVQLA  GHP++GD RYG        S P      L+ R++ LHA  L + HPTR    +  VAPPP +WG
Sbjct:   62 PASGVMVLARTSKAAARLSDQFRRRLP-EKRYLALVEGVWTGAGTAVDHL----------VKAGRTVRVVPATHPGARRAELAWRVLATDEA-----------ERLSLVEVRLETGRPHQVRVQLAHRGHPLLGDFRYGA-------SRP------LDGRNLALHAYRLGIEHPTR-RVPMHWVAPPPAAWG 217          
BLAST of mRNA_S-dermatodea_contig8836.16962.1 vs. uniprot
Match: A0A3M1NPK6_9BACT (RNA pseudouridine synthase n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A3M1NPK6_9BACT)

HSP 1 Score: 100 bits (250), Expect = 1.010e-20
Identity = 80/192 (41.67%), Postives = 95/192 (49.48%), Query Frame = 1
Query:    1 PVSGAMCIARTSKAAARLSATFRARDGVEKIYHAVVHGQLSGSGTRKDFLASPGGSGAGGVRGGRGPRTTVA-----KLAVLEWEAIALSPSRSSLLRCPRTGDPRTLVRLRLVTGRKHQIRVQLAEMGHPVVGDVRYGRRSHGGGGSGPGGRWDALEDRSILLHASELALPHPTRPEEVVRVVAPPPESWG 561
            P SG M +ARTSKAAARLS  FR R   EK Y A+V G   G+GT  D L          ++ GR  R   A     K A L W  +  S  R SL            V +RL TGR HQIRVQLA  GHP++GD+RYG R                + R++ LH+  L L HPTR   +   V PPP SWG
Sbjct:   62 PASGVMVLARTSKAAARLSEQFR-RHSPEKRYLALVEGAWDGNGTAVDHL----------LKVGRTVRVVPATHPGGKRAELAWRVLG-SDGRVSL------------VEVRLTTGRPHQIRVQLAHRGHPLLGDLRYGARQ-------------PFDGRNLALHSWYLGLEHPTRRVAMAWHVPPPP-SWG 215          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8836.16962.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KLH5_9PHAE3.300e-7159.66PseudoU_synth_2 domain-containing protein n=1 Tax=... [more]
D8LGZ5_ECTSI1.520e-6658.6723S RNA-specific pseudouridylate synthase n=1 Tax=... [more]
A0A848XZP8_9BACT6.230e-2441.94RNA pseudouridine synthase n=1 Tax=Rhodothermaceae... [more]
A0A5S9IDS9_RHOMR2.220e-2243.81RNA pseudouridine synthase n=4 Tax=Rhodothermus ma... [more]
A0A1V0DAH3_9BACT9.040e-2241.03RNA pseudouridine synthase n=2 Tax=Bacteroidetes T... [more]
A0A271J2Z8_9BACT1.630e-2140.63PseudoU_synth_2 domain-containing protein n=1 Tax=... [more]
A0A800M4B4_9BACT1.860e-2143.46RluA family pseudouridine synthase n=1 Tax=Bactero... [more]
A0A1M6P7L7_9BACT2.780e-2143.75Ribosomal large subunit pseudouridine synthase D n... [more]
UPI001420CA782.990e-2141.15RNA pseudouridine synthase n=1 Tax=Rhodocaloribact... [more]
A0A3M1NPK6_9BACT1.010e-2041.67RNA pseudouridine synthase n=1 Tax=Bacteroidetes b... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8836contigS-dermatodea_contig8836:4320..6003 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score99.8
Seed ortholog evalue1.6e-18
Seed eggNOG ortholog518766.Rmar_1191
Preferred namerluC
KEGG koko:K06177,ko:K06180
EggNOG free text desc.RNA pseudouridylate synthase
EggNOG OGs1FJD9@1100069,4NFS8@976,COG0564@1,COG0564@2
EC5.4.99.23,5.4.99.28,5.4.99.29
COG Functional cat.J
Best tax levelBacteroidetes Order II. Incertae sedis
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03009,ko03016
Hectar predicted targeting categorymitochondrion
Ec32 ortholog descriptionPseudouridine synthase, catalytic domain
Ec32 orthologEc-14_001350.1
Exons2
Model size1438
Cds size603
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8836.16962.1prot_S-dermatodea_contig8836.16962.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig8836 4335..5183 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925369.364176-UTR-S-dermatodea_contig8836:4319..43341622925369.364176-UTR-S-dermatodea_contig8836:4319..4334Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig8836 4320..4334 +
1694079886.7432976-UTR-S-dermatodea_contig8836:4319..43341694079886.7432976-UTR-S-dermatodea_contig8836:4319..4334Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig8836 4320..4334 +
1622925369.4067044-UTR-S-dermatodea_contig8836:5183..60031622925369.4067044-UTR-S-dermatodea_contig8836:5183..6003Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig8836 5184..6003 +
1694079886.775345-UTR-S-dermatodea_contig8836:5183..60031694079886.775345-UTR-S-dermatodea_contig8836:5183..6003Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig8836 5184..6003 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925369.3778484-CDS-S-dermatodea_contig8836:4334..45321622925369.3778484-CDS-S-dermatodea_contig8836:4334..4532Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8836 4335..4532 +
1694079886.7575421-CDS-S-dermatodea_contig8836:4334..45321694079886.7575421-CDS-S-dermatodea_contig8836:4334..4532Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8836 4335..4532 +
1622925369.393212-CDS-S-dermatodea_contig8836:4778..51831622925369.393212-CDS-S-dermatodea_contig8836:4778..5183Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8836 4779..5183 +
1694079886.7662463-CDS-S-dermatodea_contig8836:4778..51831694079886.7662463-CDS-S-dermatodea_contig8836:4778..5183Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8836 4779..5183 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig8836.16962.1

>prot_S-dermatodea_contig8836.16962.1 ID=prot_S-dermatodea_contig8836.16962.1|Name=mRNA_S-dermatodea_contig8836.16962.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=201bp
MCIARTSKAAARLSATFRARDGVEKIYHAVVHGQLSGSGTRKDFLASPGG
SGAGGVRGGRGPRTTVAKLAVLEWEAIALSPSRSSLLRCPRTGDPRTLVR
LRLVTGRKHQIRVQLAEMGHPVVGDVRYGRRSHGGGGSGPGGRWDALEDR
SILLHASELALPHPTRPEEVVRVVAPPPESWGELCGTEVVSEGFAGRRGW
*
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mRNA from alignment at S-dermatodea_contig8836:4320..6003+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig8836.16962.1 ID=mRNA_S-dermatodea_contig8836.16962.1|Name=mRNA_S-dermatodea_contig8836.16962.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1684bp|location=Sequence derived from alignment at S-dermatodea_contig8836:4320..6003+ (Saccorhiza dermatodea SderLu1190fm monoicous)
CCAGTCTCGGGAGCCATGTGCATAGCACGCACCAGCAAGGCCGCCGCTCG GCTGTCCGCCACCTTTCGAGCTCGTGACGGCGTAGAAAAAATCTACCACG CGGTGGTGCACGGGCAGCTCTCGGGGAGCGGCACCCGCAAAGACTTTCTC GCGTCGCCCGGTGGGAGCGGCGCGGGAGGAGTGAGGGGTGGCCGAGGTCC ACGAACAACGGTCGTCTGGACACGGTCAGCGCTCGTCAACCGTGATGCAT TGCGCGAAGACACTGATATTGGTGCCGGGTTACCGTCTCCGTTACCGCCT ACGATCAGCGAACCCGAGGAATCGATTCCCTCAACTTCAAGCACAAACAA GTCCACCGGGAGCCCCAGCGGTAGTCGAGCCGCCGAGGGGGGCGGCGACC CGCCTCCGCCGCCGTCGTCGCCCGCGACCGACAGTCGTGGCAGTTTTAGC GCAGACGAGGCTAAGCTTGCGGTGTTGGAATGGGAGGCGATTGCTCTATC GCCTTCGCGCTCGTCTCTTCTCCGCTGCCCACGTACGGGAGACCCGCGCA CCCTCGTGCGTTTGCGGCTCGTCACGGGGCGAAAACACCAGATCCGGGTG CAACTGGCGGAGATGGGGCATCCAGTCGTCGGCGATGTGCGCTACGGGCG TCGTTCTCACGGCGGGGGCGGCTCGGGCCCTGGAGGGCGGTGGGATGCGC TCGAGGATAGGAGTATTCTGTTGCACGCGAGCGAGTTGGCGCTTCCCCAC CCCACGCGGCCCGAGGAAGTTGTGCGAGTGGTGGCGCCACCGCCCGAATC GTGGGGAGAGCTGTGCGGGACGGAGGTTGTCAGCGAGGGATTCGCTGGCA GGAGAGGGTGGTAAGCTGGAGAAGTGGTGACCGAGGATCTGCGCAATAAA GTGGACATCCGTCGGGATTCATATGTGCAATGAGTACCGTTGCTTCGTGT GTGTACGTTCTTGTTCGTGGCCTGGGGGTTGTCGCCTGGACTGGTGGTGC GTGGCCGTGCAGTGTAGGTATACTCGGGTGGTTTTGTTGGCCCATGACTT GTGACGATTTTCGTCGATGTGAAGGTTGACGTTCGCGGGTTTGCAAGATT CGGTCATGTATTGACCATGCAGGTGGATGTGTAGTCGTGTGTGTTCCTTC TGCGTGCTGCGCGGTGGACGCGGCGGCCGTGAGACAGGCCGCCGATGAAG CAAGCTGACGGGCGGGCGCACCAGCAAGGTACAAACCTATTACAGCACTC TGCCTCTTGGCGACGGGTCGCTCATCCCACTACCTGGTGTAGACGAACGA AGACATGCGAATCATGTGTATACATGACTCCTTTGCGACGCTATTATAGT CGGTTGTAGACTGCTTGGGTGCGGCACCATTGCTGCTAAAAAGAGGGGAA TGCTGCGAGGAGGGGCGGAAGGGAGGGCGAGTGTGGTGGTTTGGTCTGAA ATTGTCCCAGGAGCCAGTGGTTCGCGCGCTGTGTGTGTTTCCTGGTGGTG CGAATACGTTGCCGGCGTGAGTTACGTAGGGATTTTATGCGAAGTAAAGA GGGAGCGCGCCATGATCCATCCATGTGTGTTCAAAAGGCCCGAGGTAAAT AATCCAGGGCGAAGTGTAAAGTGGAACGAGTTAACCGCGTGGAAGCGACA TGCACCCCATGGCAAATTAACGAAACGAGACTCC
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Coding sequence (CDS) from alignment at S-dermatodea_contig8836:4320..6003+

>mRNA_S-dermatodea_contig8836.16962.1 ID=mRNA_S-dermatodea_contig8836.16962.1|Name=mRNA_S-dermatodea_contig8836.16962.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1206bp|location=Sequence derived from alignment at S-dermatodea_contig8836:4320..6003+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGTGCATAGCACGCACCAGCAAGGCCGCCGCTCGGCTGTCCGCCACCTT
TCGAGCTCGTGACGGCGTAGAAAAAATCTACCACGCGGTGGTGCACGGGC
AGCTCTCGGGGAGCGGCACCCGCAAAGACTTTCTCGCGTCGCCCGGTGGG
AGCGGCGCGGGAGGAGTGAGGGGTGGCCGAGGTCCACGAACAACGGTCAT
GTGCATAGCACGCACCAGCAAGGCCGCCGCTCGGCTGTCCGCCACCTTTC
GAGCTCGTGACGGCGTAGAAAAAATCTACCACGCGGTGGTGCACGGGCAG
CTCTCGGGGAGCGGCACCCGCAAAGACTTTCTCGCGTCGCCCGGTGGGAG
CGGCGCGGGAGGAGTGAGGGGTGGCCGAGGTCCACGAACAACGGTCGCTA
AGCTTGCGGTGTTGGAATGGGAGGCGATTGCTCTATCGCCTTCGCGCTCG
TCTCTTCTCCGCTGCCCACGTACGGGAGACCCGCGCACCCTCGTGCGTTT
GCGGCTCGTCACGGGGCGAAAACACCAGATCCGGGTGCAACTGGCGGAGA
TGGGGCATCCAGTCGTCGGCGATGTGCGCTACGGGCGTCGTTCTCACGGC
GGGGGCGGCTCGGGCCCTGGAGGGCGGTGGGATGCGCTCGAGGATAGGAG
TATTCTGTTGCACGCGAGCGAGTTGGCGCTTCCCCACCCCACGCGGCCCG
AGGAAGTTGTGCGAGTGGTGGCGCCACCGCCCGAATCGTGGGGAGAGCTG
TGCGGGACGGAGGTTGTCAGCGAGGGATTCGCTGGCAGGAGAGGGTGGTA
AGCTAAGCTTGCGGTGTTGGAATGGGAGGCGATTGCTCTATCGCCTTCGC
GCTCGTCTCTTCTCCGCTGCCCACGTACGGGAGACCCGCGCACCCTCGTG
CGTTTGCGGCTCGTCACGGGGCGAAAACACCAGATCCGGGTGCAACTGGC
GGAGATGGGGCATCCAGTCGTCGGCGATGTGCGCTACGGGCGTCGTTCTC
ACGGCGGGGGCGGCTCGGGCCCTGGAGGGCGGTGGGATGCGCTCGAGGAT
AGGAGTATTCTGTTGCACGCGAGCGAGTTGGCGCTTCCCCACCCCACGCG
GCCCGAGGAAGTTGTGCGAGTGGTGGCGCCACCGCCCGAATCGTGGGGAG
AGCTGTGCGGGACGGAGGTTGTCAGCGAGGGATTCGCTGGCAGGAGAGGG
TGGTAA
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