mRNA_S-dermatodea_contig12937.1787.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig12937.1787.1
Unique NamemRNA_S-dermatodea_contig12937.1787.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig12937.1787.1 vs. uniprot
Match: D7FXM6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXM6_ECTSI)

HSP 1 Score: 161 bits (408), Expect = 1.930e-37
Identity = 93/162 (57.41%), Postives = 108/162 (66.67%), Query Frame = 1
Query:    1 DPAEIVHCARYLLTPRRASGTASSVASRLPAESLSAGVPGPEIDISISGLDRGAPGMGLPETQDGT----TPWLWVPRGGAPACRLVSQVSLEAARFGTHGIRLGDVAAFWKSFVQELRFLWEEGASVPKMDPEPPAEGYSMYDSAATGQDASRSAQLRRSI 474
            DPA+IVH ARYLLTPRR+  + S+        S+ A   G   D S  G ++                  +PWLWVPRGGAPACRLVSQ++LEAARFG  G+ LGDVAAFWKSFVQELRFLWEE ASVP+MDPEPP +G SMYD   TGQ A  S +LRR+I
Sbjct:  517 DPADIVHSARYLLTPRRSRPSRSAEKHGGGGGSVVAAEGGEVGDGS--GAEKAXXXXXXXXXXXXXXXXXSPWLWVPRGGAPACRLVSQLALEAARFGAEGVCLGDVAAFWKSFVQELRFLWEESASVPQMDPEPPVDGLSMYDLRITGQRAGLSERLRRNI 676          
BLAST of mRNA_S-dermatodea_contig12937.1787.1 vs. uniprot
Match: A0A6H5L3A9_9PHAE (Rab3 GTPase-activating protein catalytic subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3A9_9PHAE)

HSP 1 Score: 160 bits (406), Expect = 4.700e-37
Identity = 92/162 (56.79%), Postives = 108/162 (66.67%), Query Frame = 1
Query:    1 DPAEIVHCARYLLTPRRASGTASSVASRLPAESLSAGVPGP----EIDISISGLDRGAPGMGLPETQDGTTPWLWVPRGGAPACRLVSQVSLEAARFGTHGIRLGDVAAFWKSFVQELRFLWEEGASVPKMDPEPPAEGYSMYDSAATGQDASRSAQLRRSI 474
            DPA+IVH ARYLLTPRR+  + S  A +      SA  PG     + + +                 +  +PWLWVPRGGAPACRLVSQ++LEAARFG  G+ LGDVAAFWKSFVQELRFLWEE ASVP+MDPEPP +G SMYD   TGQ A  S +LRR+I
Sbjct:  516 DPADIVHSARYLLTPRRSRPSRS--AQKHGGGGGSAMAPGGGDVGDGNGAXXXXXXXXXXXXXXXXXERGSPWLWVPRGGAPACRLVSQLALEAARFGAEGVCLGDVAAFWKSFVQELRFLWEESASVPQMDPEPPVDGLSMYDLRITGQRAGLSERLRRNI 675          
BLAST of mRNA_S-dermatodea_contig12937.1787.1 vs. uniprot
Match: A0A6H5JCY7_9PHAE (Rab3 GTPase-activating protein catalytic subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCY7_9PHAE)

HSP 1 Score: 75.9 bits (185), Expect = 2.420e-10
Identity = 46/117 (39.32%), Postives = 70/117 (59.83%), Query Frame = 1
Query:  130 DISISGLDRGAPGMGLPETQDGTTP-WLWVPRGGAPACRLVSQVSLEAARFGTHGIRLGDVAAFWKSFVQELRFLWEEGASVPKMDPEPPAEGYSMYDSAA--TGQDASRSAQLRRS 471
            ++S SG  R +    +   ++G    W+W  RGGAP  RL+S +SL  A        LG ++  W SFV+++R LWE+GA++ +M+P    +G SM+D +A  TGQD S ++QLR S
Sbjct:  502 ELSTSGSGRASSDETMMGGREGRRSLWVWAERGGAPIGRLLSLLSLRVASCDD----LGSMSLLWMSFVRDVRLLWEDGATIARMNPITAVDGTSMFDWSASCTGQDRSVASQLRGS 614          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12937.1787.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FXM6_ECTSI1.930e-3757.41Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L3A9_9PHAE4.700e-3756.79Rab3 GTPase-activating protein catalytic subunit n... [more]
A0A6H5JCY7_9PHAE2.420e-1039.32Rab3 GTPase-activating protein catalytic subunit n... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12937contigS-dermatodea_contig12937:2233..5896 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score68.9
Seed ortholog evalue8.5e-09
Seed eggNOG ortholog6087.XP_002158058.2
Preferred nameRAB3GAP1
KEGG koko:K18270
GOsGO:0001505,GO:0001654,GO:0001956,GO:0003008,GO:0003674,GO:0005085,GO:0005096,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005794,GO:0005811,GO:0005829,GO:0006807,GO:0006810,GO:0006914,GO:0006996,GO:0007154,GO:0007165,GO:0007166,GO:0007267,GO:0007268,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0007423,GO:0008047,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009653,GO:0009889,GO:0009891,GO:0009893,GO:0009894,GO:0009896,GO:0009966,GO:0009987,GO:0010171,GO:0010468,GO:0010506,GO:0010508,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0010638,GO:0010646,GO:0010647,GO:0010807,GO:0012505,GO:0014048,GO:0014049,GO:0016020,GO:0016043,GO:0016192,GO:0016239,GO:0016241,GO:0017016,GO:0017137,GO:0017157,GO:0017158,GO:0019222,GO:0019538,GO:0019899,GO:0021536,GO:0021761,GO:0021854,GO:0023051,GO:0023052,GO:0023056,GO:0030234,GO:0030695,GO:0030900,GO:0031267,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031331,GO:0031399,GO:0031401,GO:0031647,GO:0031984,GO:0032268,GO:0032270,GO:0032386,GO:0032483,GO:0032501,GO:0032502,GO:0032879,GO:0032890,GO:0032892,GO:0032991,GO:0033036,GO:0033043,GO:0033365,GO:0034389,GO:0034613,GO:0042175,GO:0042391,GO:0043010,GO:0043085,GO:0043087,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043254,GO:0043269,GO:0043270,GO:0043547,GO:0044070,GO:0044087,GO:0044088,GO:0044089,GO:0044090,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0045202,GO:0046578,GO:0046907,GO:0046928,GO:0046982,GO:0046983,GO:0048167,GO:0048168,GO:0048172,GO:0048489,GO:0048513,GO:0048518,GO:0048522,GO:0048583,GO:0048731,GO:0048856,GO:0050746,GO:0050747,GO:0050789,GO:0050790,GO:0050794,GO:0050804,GO:0050806,GO:0050821,GO:0050877,GO:0050896,GO:0051020,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051056,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051246,GO:0051247,GO:0051336,GO:0051345,GO:0051588,GO:0051590,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051716,GO:0051952,GO:0051954,GO:0051955,GO:0051957,GO:0051966,GO:0051968,GO:0060076,GO:0060078,GO:0060079,GO:0060255,GO:0060322,GO:0060323,GO:0060324,GO:0060325,GO:0060341,GO:0060589,GO:0060627,GO:0061646,GO:0061919,GO:0065007,GO:0065008,GO:0065009,GO:0070727,GO:0070972,GO:0071704,GO:0071782,GO:0071840,GO:0072594,GO:0072599,GO:0072657,GO:0080090,GO:0090150,GO:0097051,GO:0097435,GO:0097479,GO:0097480,GO:0098693,GO:0098772,GO:0098827,GO:0098916,GO:0099003,GO:0099177,GO:0099536,GO:0099537,GO:0099565,GO:1901564,GO:1902115,GO:1902117,GO:1902531,GO:1902803,GO:1903059,GO:1903061,GO:1903233,GO:1903294,GO:1903296,GO:1903305,GO:1903371,GO:1903373,GO:1903530,GO:1903532,GO:1903793,GO:1905114,GO:1990000,GO:2000112,GO:2000300,GO:2000785,GO:2000786
EggNOG free text desc.positive regulation of glutamate neurotransmitter secretion in response to membrane depolarization
EggNOG OGs38HEI@33154,3BAPD@33208,KOG2390@1,KOG2390@2759
COG Functional cat.DKL
Best tax levelMetazoa
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131,ko04147
Hectar predicted targeting categoryother localisation
Exons7
Model size2161
Cds size1722
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12937.1787.1prot_S-dermatodea_contig12937.1787.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig12937 2233..4935 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924268.0866559-CDS-S-dermatodea_contig12937:2232..23921622924268.0866559-CDS-S-dermatodea_contig12937:2232..2392Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12937 2233..2392 -
1694079138.1168776-CDS-S-dermatodea_contig12937:2232..23921694079138.1168776-CDS-S-dermatodea_contig12937:2232..2392Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12937 2233..2392 -
1622924268.0997481-CDS-S-dermatodea_contig12937:2697..27811622924268.0997481-CDS-S-dermatodea_contig12937:2697..2781Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12937 2698..2781 -
1694079138.1365185-CDS-S-dermatodea_contig12937:2697..27811694079138.1365185-CDS-S-dermatodea_contig12937:2697..2781Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12937 2698..2781 -
1622924268.108072-CDS-S-dermatodea_contig12937:3068..42871622924268.108072-CDS-S-dermatodea_contig12937:3068..4287Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12937 3069..4287 -
1694079138.1464148-CDS-S-dermatodea_contig12937:3068..42871694079138.1464148-CDS-S-dermatodea_contig12937:3068..4287Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12937 3069..4287 -
1622924268.1162684-CDS-S-dermatodea_contig12937:4676..49351622924268.1162684-CDS-S-dermatodea_contig12937:4676..4935Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12937 4677..4935 -
1694079138.156215-CDS-S-dermatodea_contig12937:4676..49351694079138.156215-CDS-S-dermatodea_contig12937:4676..4935Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12937 4677..4935 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924268.124948-UTR-S-dermatodea_contig12937:4935..49931622924268.124948-UTR-S-dermatodea_contig12937:4935..4993Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig12937 4936..4993 -
1694079138.1694198-UTR-S-dermatodea_contig12937:4935..49931694079138.1694198-UTR-S-dermatodea_contig12937:4935..4993Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig12937 4936..4993 -
1622924268.1372695-UTR-S-dermatodea_contig12937:5246..53471622924268.1372695-UTR-S-dermatodea_contig12937:5246..5347Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig12937 5247..5347 -
1694079138.178349-UTR-S-dermatodea_contig12937:5246..53471694079138.178349-UTR-S-dermatodea_contig12937:5246..5347Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig12937 5247..5347 -
1622924268.1485274-UTR-S-dermatodea_contig12937:5496..57201622924268.1485274-UTR-S-dermatodea_contig12937:5496..5720Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig12937 5497..5720 -
1694079138.1864831-UTR-S-dermatodea_contig12937:5496..57201694079138.1864831-UTR-S-dermatodea_contig12937:5496..5720Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig12937 5497..5720 -
1622924268.1585824-UTR-S-dermatodea_contig12937:5840..58961622924268.1585824-UTR-S-dermatodea_contig12937:5840..5896Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig12937 5841..5896 -
1694079138.1957982-UTR-S-dermatodea_contig12937:5840..58961694079138.1957982-UTR-S-dermatodea_contig12937:5840..5896Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig12937 5841..5896 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig12937.1787.1

>prot_S-dermatodea_contig12937.1787.1 ID=prot_S-dermatodea_contig12937.1787.1|Name=mRNA_S-dermatodea_contig12937.1787.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=574bp
MPHDQHSCDDLSQRPRILAAARVALRQEKASRGSLPTRMGEVSAAVEPES
GGLQRLGEGVPGLAGSWCPRPHPICGERGGGGGGWSDELISKQIVTLEPH
PALPHPKPIRSTCLLHQKLQMLNCCVAEQNRVRALVTSTLTLPTEAALFS
PPPPDAASAASALPESEGASTVAAAPTAGDESNATSNGRKAEKRGAADSE
TPPPRMETLGSVGSNSDKGGMADADLAVAAGENVMAGEENRGDRTYGAVV
PHEETQEERSARMKATFAAERDAILRRVGVKKEGDSGGGGGGWWMLGQGR
QNDVQHGASTDSPATLQARPGPDDAVGGNEGGGTDLGEEDSETTAGEHGT
GGAAPGGRHEQYAESEREEAAAAAAPIKRRGKVGGAVRRVGGAVRTVGRA
VKNVRGRPSRDQVNKSVHGVEGVPGQAPVEAEFGGGKEACEKDGNEDGSG
DAGAEGPAADARGWRSGDNAGDGAVGGPRPVFTGERLLVTGDWVVAPELM
PTCPLTSDMLEQQRELVRRLSFRADSDSADAQVSKSRVSRLRLATLAADM
RCFLRANRGAVFADFVRWYSPANW
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mRNA from alignment at S-dermatodea_contig12937:2233..5896-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig12937.1787.1 ID=mRNA_S-dermatodea_contig12937.1787.1|Name=mRNA_S-dermatodea_contig12937.1787.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3664bp|location=Sequence derived from alignment at S-dermatodea_contig12937:2233..5896- (Saccorhiza dermatodea SderLu1190fm monoicous)
GATCCCGCCGAGATTGTCCATTGCGCCCGCTACCTCCTCACCCCCCGCCG CGCCTCGTTGAGCTACCGGGATTCTTGGAACAGCAGGGGTAGAGACTGGC ACAAGCCGTCTACCCCGCCCCCGCAGCCAGGAACGCCGCCACCGCAAGGG CCAGCTCTTGTCGAAACCCCGGGGAGAGGGACCGCGTCGAGTGTAGCCTC GCGGCTTCCGGCGGAGTCTCTCTCGGCAGGAGTTCCAGGTCCAGAAATTG ACATTTCTATCAGCGGTTTGGACCGAGGCGCGCCGGGGATGGGTTTGCCA GAGACGCAAGATGGAACAACGCCGTGGTTGTGGGTGCCGAGGGGTGGGGC ACCCGCGTGCCGGTTGGTTTCTCAGGTTTCGCTCGAGGCTGCTCGATTTG GTGAGCAGAAGTCTTGGGGGGGGTGTGAGGGGGATCTCTCTGGGTTTCAG GTCACTCCGCAGTCGGAAAATCGGAAACTACCTTGTCCAATACCCACAAG AGCTCTGCCTTCGCATCCCTCGCCTCGAACGCCCTTTGATATCCTCCAGG AACGCACGGGATTCGCCTGGGAGATGTGGCGGCCTTCTGGAAATCGTTCG TGCAGGAGCTAAGGTTCCTGTGGGAGGAGGGGGCGTCCGTTCCTAAGATG GTGAGAGAAAGGCTGGACGGTGGGATATAGCAGTTTATGAACTCTTTTGG AGCCACCTTTGGCAAAGTAGGGAGGAAAGACTGGCTGTTGGCGATAGATT GATCCTGTGGGAACGATGCTCGTCCTCTCAAGGGCGTGTTTTTAATCCCC TGCCCCCTTGGGTCAGTGACCCCACCCCGTCTCCTAAACCTGGGTGACCC CCCCCCCCCCCCCCCCCCCCCCCCGCCCGCGCGCGTCCCGTTTCCACGTG AAGGACCCGGAGCCGCCGGCGGAAGGCTACAGCATGTACGACTCGGCGGC AACCGGCCAAGATGCCTCACGATCAGCACAGTTGCGACGATCTATCGCAG CGGCCACGGATCTTGGCAGCAGCCCGCGTGGCACTGCGACAGGAAAAGGC GTCGCGGGGGTCACTGCCCACGAGGATGGGCGAGGTTTCGGCAGCGGTGG AGCCCGAGAGCGGGGGTTTGCAACGTCTTGGGGAAGGGGTGCCGGGGTTG GCGGGGTCGTGGTGCCCCCGCCCCCACCCGATATGCGGTGAGCGGGGGGG GGGTGGGGGTGGTTGGAGTGGTTTTTCGCTTGCGCGGTTCCTCTCGATGA TGCATGTGATGTTTGCCTCTGGCAGGGGTAGCTCGAAATGCGCTGCCGGC TTTATTACCCGCGAAGGACTCGTCGTTTTTTGCGCTCCCACGAAGTTGTT GGATTTGGTTTTGTTTTATGGGGGTAGAAATTTCTCGTAGGCGCGATGTC TGAAATGCGTCAAGCGGTTGTCGTTGCCGCGGTGGAAGGGTATACTTTGT GCACGAGCCGGTACGAGTCTCGTGATACCCGCCCCTCGAGGACATCGCCC CCGGCGCCAAATTTAGACGAACACAATACGTATAAAACAACAACGCGGGG ATTTACGCTTATCCTTTGATGGCTCTTTCAAGGAAACGAACATATAGAGC CCCACATAGATGAACTCATTTCCAAACAAATCGTAACCCTCGAACCCCAC CCCGCCCTACCCCACCCAAAACCGATCCGTAGCACCTGCCTTCTGCACCA GAAGCTCCAGATGCTAAACTGCTGCGTGGCCGAGCAGAACAGGGTACGAG CACTCGTTACGTCTACCTTGACGCTACCCACCGAGGCGGCTTTGTTTTCA CCGCCACCTCCGGACGCGGCCTCCGCGGCAAGCGCCCTCCCGGAGTCGGA GGGAGCGTCAACGGTAGCCGCTGCACCCACAGCAGGCGACGAGTCAAACG CTACATCAAACGGTCGAAAGGCCGAAAAGCGGGGCGCCGCGGACTCGGAA ACGCCACCACCTCGGATGGAAACCCTCGGAAGCGTGGGAAGTAACAGCGA CAAGGGAGGTATGGCAGACGCGGACTTGGCGGTAGCGGCTGGCGAAAACG TGATGGCAGGCGAGGAAAATCGCGGTGACCGGACATACGGCGCGGTCGTT CCCCACGAGGAGACTCAGGAGGAGCGGTCGGCGCGGATGAAGGCTACCTT CGCAGCCGAAAGAGACGCGATTCTCCGCAGAGTTGGGGTTAAAAAAGAGG GCGATAGCGGCGGCGGCGGCGGGGGGTGGTGGATGCTTGGCCAAGGCCGC CAAAACGACGTACAGCATGGGGCGAGTACTGATTCTCCTGCGACGCTTCA GGCGCGTCCGGGCCCCGATGACGCCGTGGGCGGTAATGAAGGTGGTGGGA CAGACCTAGGCGAGGAGGATTCCGAGACGACGGCCGGGGAGCACGGAACG GGTGGCGCGGCCCCCGGTGGGCGGCACGAGCAGTACGCGGAATCGGAGCG GGAAGAGGCAGCGGCGGCGGCCGCGCCGATCAAGCGGAGAGGTAAAGTGG GGGGTGCCGTCAGAAGGGTCGGCGGTGCTGTGAGGACCGTCGGCCGGGCC GTAAAAAACGTTCGCGGTCGCCCTTCGAGGGACCAGGTCAATAAGAGTGT CCACGGAGTCGAAGGTGTACCCGGCCAGGCCCCGGTGGAGGCGGAGTTTG GCGGAGGGAAAGAGGCGTGCGAGAAAGATGGGAACGAGGACGGTTCCGGG GATGCGGGTGCCGAAGGGCCGGCGGCGGACGCGCGAGGGTGGCGAAGCGG TGACAATGCCGGCGATGGTGCTGTGGGTGGTCCTCGACCGGTGTTTACTG GGGAGCGCCTTCTCGTAACGGGAGACTGGTGAGTCGCGGCCAACGCGTCG GGTTGGTGGAGTTATCTAAATCTTGGAGCTCCCTCTCTACGGCTCATCGT GGCGTTTTGGCATGATTGAAACCGTCGATCAACTACAGAGGTCATATATA GGGCGATGTACGATGTAGTTTCTCGCCCGCTTCCAGGAACAATGGGAGCA TGCGGACGGCGATTTAGCCCTCACAATCACAGACACAGGATCGATGGCGC TTTCGCCTATCCTTTATTACCCTCTTGGCCGCCCGACATATCGTGGCCGC ATCTTGTTCGCTCAGGGTGGTGGCGCCGGAGCTCATGCCAACGTGCCCGC TCACGTCGGACATGCTGGAGCAGCAGAGGGAGCTCGTGCGGCGGCTCAGG TGCGCTACAACGCTGTCCGCGTCCTACATTTCTTCGCCATCCATCGCGAT CCGTACTGGAACCCTCTTCTTCATACCGCGCAGCAAATGTGGAGCTGCAA GCGTCACGCCGCCAAGCGCGCACCCATGACACGTTCCTATACTTCAAAGC AGGAGTTGCGTCCGGCGAACTACAACGGTCTCGTAGCTCCCAAGCGCGAG GCCTCTATCTCTCTCTTGCCCGATACCTTATCGCTGTTCTGTTTTTTCGC CCACTCCGCCGCAAAATGGGTGCCACGCGTTGCTTGTGGTGCCCTCCTTC ACAGTTTCCGCGCCGACTCCGACAGCGCGGACGCACAGGTGTCGAAGAGC AGGGTGTCGCGCCTGCGTCTGGCCACGCTCGCGGCCGACATGCGGTGCTT CCTTCGCGCGAACCGGGGGGCCGTGTTCGCCGACTTCGTGCGCTGGTATA GTCCTGCGAACTGG
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Coding sequence (CDS) from alignment at S-dermatodea_contig12937:2233..5896-

>mRNA_S-dermatodea_contig12937.1787.1 ID=mRNA_S-dermatodea_contig12937.1787.1|Name=mRNA_S-dermatodea_contig12937.1787.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=3444bp|location=Sequence derived from alignment at S-dermatodea_contig12937:2233..5896- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGCCTCACGATCAGCACAGTTGCGACGATCTATCGCAGCGGCCACGGAT
CTTGGCAGCAGCCCGCGTGGCACTGCGACAGGAAAAGGCGTCGCGGGGGT
CACTGCCCACGAGGATGGGCGAGGTTTCGGCAGCGGTGGAGCCCGAGAGC
GGGGGTTTGCAACGTCTTGGGGAAGGGGTGCCGGGGTTGGCGGGGTCGTG
GTGCCCCCGCCCCCACCCGATATGCGGTGAGCGGGGGGGGGGTGGGGGTG
GTTGGAGTGATGCCTCACGATCAGCACAGTTGCGACGATCTATCGCAGCG
GCCACGGATCTTGGCAGCAGCCCGCGTGGCACTGCGACAGGAAAAGGCGT
CGCGGGGGTCACTGCCCACGAGGATGGGCGAGGTTTCGGCAGCGGTGGAG
CCCGAGAGCGGGGGTTTGCAACGTCTTGGGGAAGGGGTGCCGGGGTTGGC
GGGGTCGTGGTGCCCCCGCCCCCACCCGATATGCGGTGAGCGGGGGGGGG
GTGGGGGTGGTTGGAGTGATGAACTCATTTCCAAACAAATCGTAACCCTC
GAACCCCACCCCGCCCTACCCCACCCAAAACCGATCCGTAGCACCTGCCT
TCTGCACCAGAAGCTCCAGATGCTAAACTGCTGCGTGGCCGAGCAGAACA
GGGTACGAGCACTCGTTACGTCTACCTTGACGCTACCCACCGAGGCGGCT
TTGTTTTCACCGCCACCTCCGGACGCGGCCTCCGCGGCAAGCGCCCTCCC
GGAGTCGGAGGGAGCGTCAACGGTAGCCGCTGCACCCACAGCAGGCGACG
AGTCAAACGCTACATCAAACGGTCGAAAGGCCGAAAAGCGGGGCGCCGCG
GACTCGGAAACGCCACCACCTCGGATGGAAACCCTCGGAAGCGTGGGAAG
TAACAGCGACAAGGGAGGTATGGCAGACGCGGACTTGGCGGTAGCGGCTG
GCGAAAACGTGATGGCAGGCGAGGAAAATCGCGGTGACCGGACATACGGC
GCGGTCGTTCCCCACGAGGAGACTCAGGAGGAGCGGTCGGCGCGGATGAA
GGCTACCTTCGCAGCCGAAAGAGACGCGATTCTCCGCAGAGTTGGGGTTA
AAAAAGAGGGCGATAGCGGCGGCGGCGGCGGGGGGTGGTGGATGCTTGGC
CAAGGCCGCCAAAACGACGTACAGCATGGGGCGAGTACTGATTCTCCTGC
GACGCTTCAGGCGCGTCCGGGCCCCGATGACGCCGTGGGCGGTAATGAAG
GTGGTGGGACAGACCTAGGCGAGGAGGATTCCGAGACGACGGCCGGGGAG
CACGGAACGGGTGGCGCGGCCCCCGGTGGGCGGCACGAGCAGTACGCGGA
ATCGGAGCGGGAAGAGGCAGCGGCGGCGGCCGCGCCGATCAAGCGGAGAG
GTAAAGTGGGGGGTGCCGTCAGAAGGGTCGGCGGTGCTGTGAGGACCGTC
GGCCGGGCCGTAAAAAACGTTCGCGGTCGCCCTTCGAGGGACCAGGTCAA
TAAGAGTGTCCACGGAGTCGAAGGTGTACCCGGCCAGGCCCCGGTGGAGG
CGGAGTTTGGCGGAGGGAAAGAGGCGTGCGAGAAAGATGGGAACGAGGAC
GGTTCCGGGGATGCGGGTGCCGAAGGGCCGGCGGCGGACGCGCGAGGGTG
GCGAAGCGGTGACAATGCCGGCGATGGTGCTGTGGGTGGTCCTCGACCGG
TGTTTACTGGGGAGCGCCTTCTCGTAACGGGAGACTGATGAACTCATTTC
CAAACAAATCGTAACCCTCGAACCCCACCCCGCCCTACCCCACCCAAAAC
CGATCCGTAGCACCTGCCTTCTGCACCAGAAGCTCCAGATGCTAAACTGC
TGCGTGGCCGAGCAGAACAGGGTACGAGCACTCGTTACGTCTACCTTGAC
GCTACCCACCGAGGCGGCTTTGTTTTCACCGCCACCTCCGGACGCGGCCT
CCGCGGCAAGCGCCCTCCCGGAGTCGGAGGGAGCGTCAACGGTAGCCGCT
GCACCCACAGCAGGCGACGAGTCAAACGCTACATCAAACGGTCGAAAGGC
CGAAAAGCGGGGCGCCGCGGACTCGGAAACGCCACCACCTCGGATGGAAA
CCCTCGGAAGCGTGGGAAGTAACAGCGACAAGGGAGGTATGGCAGACGCG
GACTTGGCGGTAGCGGCTGGCGAAAACGTGATGGCAGGCGAGGAAAATCG
CGGTGACCGGACATACGGCGCGGTCGTTCCCCACGAGGAGACTCAGGAGG
AGCGGTCGGCGCGGATGAAGGCTACCTTCGCAGCCGAAAGAGACGCGATT
CTCCGCAGAGTTGGGGTTAAAAAAGAGGGCGATAGCGGCGGCGGCGGCGG
GGGGTGGTGGATGCTTGGCCAAGGCCGCCAAAACGACGTACAGCATGGGG
CGAGTACTGATTCTCCTGCGACGCTTCAGGCGCGTCCGGGCCCCGATGAC
GCCGTGGGCGGTAATGAAGGTGGTGGGACAGACCTAGGCGAGGAGGATTC
CGAGACGACGGCCGGGGAGCACGGAACGGGTGGCGCGGCCCCCGGTGGGC
GGCACGAGCAGTACGCGGAATCGGAGCGGGAAGAGGCAGCGGCGGCGGCC
GCGCCGATCAAGCGGAGAGGTAAAGTGGGGGGTGCCGTCAGAAGGGTCGG
CGGTGCTGTGAGGACCGTCGGCCGGGCCGTAAAAAACGTTCGCGGTCGCC
CTTCGAGGGACCAGGTCAATAAGAGTGTCCACGGAGTCGAAGGTGTACCC
GGCCAGGCCCCGGTGGAGGCGGAGTTTGGCGGAGGGAAAGAGGCGTGCGA
GAAAGATGGGAACGAGGACGGTTCCGGGGATGCGGGTGCCGAAGGGCCGG
CGGCGGACGCGCGAGGGTGGCGAAGCGGTGACAATGCCGGCGATGGTGCT
GTGGGTGGTCCTCGACCGGTGTTTACTGGGGAGCGCCTTCTCGTAACGGG
AGACTGGGTGGTGGCGCCGGAGCTCATGCCAACGTGCCCGCTCACGTCGG
ACATGCTGGAGCAGCAGAGGGAGCTCGTGCGGCGGCTCAGGGTGGTGGCG
CCGGAGCTCATGCCAACGTGCCCGCTCACGTCGGACATGCTGGAGCAGCA
GAGGGAGCTCGTGCGGCGGCTCAGTTTCCGCGCCGACTCCGACAGCGCGG
ACGCACAGGTGTCGAAGAGCAGGGTGTCGCGCCTGCGTCTGGCCACGCTC
GCGGCCGACATGCGGTGCTTCCTTCGCGCGAACCGGGGGGCCGTGTTCGC
CGACTTCGTGCGCTGGTATAGTCCTGCGAACTGGTTTCCGCGCCGACTCC
GACAGCGCGGACGCACAGGTGTCGAAGAGCAGGGTGTCGCGCCTGCGTCT
GGCCACGCTCGCGGCCGACATGCGGTGCTTCCTTCGCGCGAACCGGGGGG
CCGTGTTCGCCGACTTCGTGCGCTGGTATAGTCCTGCGAACTGG
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