mRNA_S-dermatodea_contig11434.929.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig11434.929.1
Unique NamemRNA_S-dermatodea_contig11434.929.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig11434.929.1 vs. uniprot
Match: D7FLZ6_ECTSI (Eukaryotic translation initiation factor 4C n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLZ6_ECTSI)

HSP 1 Score: 266 bits (680), Expect = 1.930e-89
Identity = 134/135 (99.26%), Postives = 134/135 (99.26%), Query Frame = 1 
Query:    1 GKGGKNRRRGKNENEETKRELEFKEAGQEYAQVVRMLGNGRAECYCYDGVTRLGHIRGKMRKKVWVSAGDIVLVGKRDYQDDKVDIIHRYNADEARNLKQYGELPEHARINETAVDLAMEGDGAEDDIGIDFDGI 405
            GKGGKNRRRGKNENEETKRELEFKEAGQEYAQVVRMLGNGRAECYCYDGVTRLGHIRGKMRKKVWVSAGDIVLVGKRDYQDDKVDIIHRYNADEARNLKQYGELPEHARINETAVDLAMEGDGAEDDIGIDFD I
Sbjct:    6 GKGGKNRRRGKNENEETKRELEFKEAGQEYAQVVRMLGNGRAECYCYDGVTRLGHIRGKMRKKVWVSAGDIVLVGKRDYQDDKVDIIHRYNADEARNLKQYGELPEHARINETAVDLAMEGDGAEDDIGIDFDEI 140
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BLAST of mRNA_S-dermatodea_contig11434.929.1 vs. uniprot
Match: A0A7S2UW94_9STRA (Eukaryotic translation initiation factor 4C n=2 Tax=Ochrophyta TaxID=2696291 RepID=A0A7S2UW94_9STRA)

HSP 1 Score: 256 bits (653), Expect = 2.520e-85
Identity = 126/135 (93.33%), Postives = 131/135 (97.04%), Query Frame = 1 
Query:    1 GKGGKNRRRGKNENEETKRELEFKEAGQEYAQVVRMLGNGRAECYCYDGVTRLGHIRGKMRKKVWVSAGDIVLVGKRDYQDDKVDIIHRYNADEARNLKQYGELPEHARINETAVDLAMEGDGAEDDIGIDFDGI 405
            GKGGKNRRRGKNENEETKRELEFKE GQEYAQV+RMLGNGR EC+CYDG+TRLGHIRGKMRKKVWVSAGDIVLVG RDYQDDKVDIIHRYNADEARNLKQYGELPEHARINETAVD+AMEGDGA+DDIGIDFD I
Sbjct:    6 GKGGKNRRRGKNENEETKRELEFKEDGQEYAQVIRMLGNGRCECFCYDGITRLGHIRGKMRKKVWVSAGDIVLVGLRDYQDDKVDIIHRYNADEARNLKQYGELPEHARINETAVDIAMEGDGADDDIGIDFDDI 140
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BLAST of mRNA_S-dermatodea_contig11434.929.1 vs. uniprot
Match: A0A7S2WRV7_9STRA (Eukaryotic translation initiation factor 4C n=3 Tax=Ochrophyta TaxID=2696291 RepID=A0A7S2WRV7_9STRA)

HSP 1 Score: 231 bits (588), Expect = 2.020e-75
Identity = 116/135 (85.93%), Postives = 124/135 (91.85%), Query Frame = 1 
Query:    1 GKGGKNRRRGKNENEETKRELEFKEAGQEYAQVVRMLGNGRAECYCYDGVTRLGHIRGKMRKKVWVSAGDIVLVGKRDYQDDKVDIIHRYNADEARNLKQYGELPEHARINETAVDLAMEGDGAEDDIGIDFDGI 405
            GKGGKNRRRGKN+NEE+KR+LEFKE GQEY+QVVRMLGNGR ECYC+DG TRLGHIRGKMRKKVWVSAGDIVLVG R++QDDKVDIIH+YNADEARNLK YGELPE ARINETAVDLAMEG    DDIGIDFD I
Sbjct:    6 GKGGKNRRRGKNDNEESKRQLEFKEPGQEYSQVVRMLGNGRCECYCFDGQTRLGHIRGKMRKKVWVSAGDIVLVGLREFQDDKVDIIHKYNADEARNLKTYGELPETARINETAVDLAMEGGDEVDDIGIDFDEI 140
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BLAST of mRNA_S-dermatodea_contig11434.929.1 vs. uniprot
Match: B7FP79_PHATC (Eukaryotic translation initiation factor 4C (Fragment) n=6 Tax=Bacillariophycidae TaxID=33850 RepID=B7FP79_PHATC)

HSP 1 Score: 227 bits (579), Expect = 4.010e-74
Identity = 111/135 (82.22%), Postives = 125/135 (92.59%), Query Frame = 1 
Query:    1 GKGGKNRRRGKNENEETKRELEFKEAGQEYAQVVRMLGNGRAECYCYDGVTRLGHIRGKMRKKVWVSAGDIVLVGKRDYQDDKVDIIHRYNADEARNLKQYGELPEHARINETAVDLAMEGDGAEDDIGIDFDGI 405
            GKGGKNRRRGK + EE+KRELEFKE GQEYAQVV+MLGNGR EC+C+DGVTRLGHIRGKMRKKVW++AGDIVLV KRD+QD+KVDI+H+Y+ADEARNLKQYGELPE ARINETAVD+AM GD  +DDIGIDFD I
Sbjct:    1 GKGGKNRRRGKGDGEESKRELEFKEDGQEYAQVVKMLGNGRCECFCFDGVTRLGHIRGKMRKKVWITAGDIVLVAKRDFQDEKVDIVHKYSADEARNLKQYGELPETARINETAVDMAMAGDENDDDIGIDFDDI 135
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BLAST of mRNA_S-dermatodea_contig11434.929.1 vs. uniprot
Match: A0A7S2A929_TRICV (Eukaryotic translation initiation factor 4C n=10 Tax=Bacillariophyta TaxID=2836 RepID=A0A7S2A929_TRICV)

HSP 1 Score: 228 bits (580), Expect = 6.710e-74
Identity = 113/135 (83.70%), Postives = 123/135 (91.11%), Query Frame = 1 
Query:    1 GKGGKNRRRGKNENEETKRELEFKEAGQEYAQVVRMLGNGRAECYCYDGVTRLGHIRGKMRKKVWVSAGDIVLVGKRDYQDDKVDIIHRYNADEARNLKQYGELPEHARINETAVDLAMEGDGAEDDIGIDFDGI 405
            GKGGKNRRRGK + EE KRELEFKE GQEYAQVV+MLGNGR EC+C+DGVTRLGHIRGKMRKKVWV+AGDIVLVGKRD+QD+KVDI+H+Y ADEARNLKQYGELPE ARINETAVDLAM  +  EDDIGIDFD I
Sbjct:   27 GKGGKNRRRGKGDGEEAKRELEFKEEGQEYAQVVKMLGNGRCECFCFDGVTRLGHIRGKMRKKVWVTAGDIVLVGKRDFQDEKVDILHKYTADEARNLKQYGELPETARINETAVDLAMTTEDGEDDIGIDFDDI 161
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BLAST of mRNA_S-dermatodea_contig11434.929.1 vs. uniprot
Match: B5YN42_THAPS (Eukaryotic translation initiation factor 4C n=2 Tax=Thalassiosira TaxID=35127 RepID=B5YN42_THAPS)

HSP 1 Score: 221 bits (564), Expect = 9.120e-72
Identity = 110/135 (81.48%), Postives = 122/135 (90.37%), Query Frame = 1 
Query:    1 GKGGKNRRRGKNENEETKRELEFKEAGQEYAQVVRMLGNGRAECYCYDGVTRLGHIRGKMRKKVWVSAGDIVLVGKRDYQDDKVDIIHRYNADEARNLKQYGELPEHARINETAVDLAMEGDGAEDDIGIDFDGI 405
            G+GGKNRR      EE+KRELEFKE GQEYAQVVRMLGNGR EC+CYDGVTRLGHIRGKMRKKVW++AGDIVLVGKRD+QD+KVDI+H+Y+ADEARNLKQYGELPE ARINETAVD AM G+G +DDIGIDFD I
Sbjct:    6 GQGGKNRRXXXXXXEESKRELEFKEEGQEYAQVVRMLGNGRCECFCYDGVTRLGHIRGKMRKKVWITAGDIVLVGKRDFQDEKVDILHKYSADEARNLKQYGELPETARINETAVDQAMAGEGDDDDIGIDFDDI 140
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BLAST of mRNA_S-dermatodea_contig11434.929.1 vs. uniprot
Match: K3WDU9_GLOUD (Eukaryotic translation initiation factor 4C n=28 Tax=Oomycota TaxID=4762 RepID=K3WDU9_GLOUD)

HSP 1 Score: 218 bits (556), Expect = 1.410e-70
Identity = 110/135 (81.48%), Postives = 121/135 (89.63%), Query Frame = 1 
Query:    1 GKGGKNRRRGKNENEETKRELEFKEAGQEYAQVVRMLGNGRAECYCYDGVTRLGHIRGKMRKKVWVSAGDIVLVGKRDYQDDKVDIIHRYNADEARNLKQYGELPEHARINETAVDLAMEGDGAEDDIGIDFDGI 405
            GKGGKNRRRGKN+NEE KRELEFKE GQEYAQVVRMLGNGR E YC+DGVTRLGHIRGKMRKKVWV AGDI+LV  R+YQD KVDIIH+YNADEAR+LK YGELP++ARINET VD+AMEGD  +DDIG +FD I
Sbjct:    6 GKGGKNRRRGKNDNEENKRELEFKEDGQEYAQVVRMLGNGRLEAYCFDGVTRLGHIRGKMRKKVWVGAGDIILVSLREYQDGKVDIIHKYNADEARSLKAYGELPDNARINETTVDMAMEGD--DDDIGFEFDDI 138
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BLAST of mRNA_S-dermatodea_contig11434.929.1 vs. uniprot
Match: W7TWV5_9STRA (Eukaryotic translation initiation factor 4C n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TWV5_9STRA)

HSP 1 Score: 213 bits (541), Expect = 2.990e-68
Identity = 106/136 (77.94%), Postives = 120/136 (88.24%), Query Frame = 1 
Query:    1 GKGGKNRRRGKNENEETKRELEFKEAGQEYAQVVRMLGNGRAECYCYDGVTRLGHIRGKMRKKVWVSAGDIVLVGKRDYQDDKVDIIHRYNADEARNLKQYGELPEHARINETAVDLAMEGDG-AEDDIGIDFDGI 405
            GKGGKNRRRGKNENEETKR+L FKE GQEY QV++MLGNGR E YC+DG  RL HIRGKMRKKVWVSAGDIVL+G RDYQ+DKVDIIH+YNADEARNLK +GELPE A+INETA+DL +EG   +ED+IG+DFD I
Sbjct:    6 GKGGKNRRRGKNENEETKRDLLFKEEGQEYGQVIKMLGNGRCEVYCFDGKNRLAHIRGKMRKKVWVSAGDIVLLGMRDYQEDKVDIIHKYNADEARNLKAFGELPETAKINETAIDLTLEGGSDSEDEIGVDFDEI 141
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BLAST of mRNA_S-dermatodea_contig11434.929.1 vs. uniprot
Match: W4GJ99_9STRA (Eukaryotic translation initiation factor 4C n=8 Tax=Saprolegniaceae TaxID=4764 RepID=W4GJ99_9STRA)

HSP 1 Score: 205 bits (521), Expect = 3.310e-65
Identity = 105/135 (77.78%), Postives = 116/135 (85.93%), Query Frame = 1 
Query:    1 GKGGKNRRRGKNENEETKRELEFKEAGQEYAQVVRMLGNGRAECYCYDGVTRLGHIRGKMRKKVWVSAGDIVLVGKRDYQDDKVDIIHRYNADEARNLKQYGELPEHARINETAVDLAMEGDGAEDDIGIDFDGI 405
            GKGGKNRRRGK + EE KRELEFKE GQEYAQV+RMLGNGR E YCYDGVTRLGHIRGKMRKKVWV  GDIVLV  R+YQD KVDIIH+YNADEAR+LK YGELP++ARINET+VD  M+G G +DD G +FD I
Sbjct:    9 GKGGKNRRRGKGDVEENKRELEFKEDGQEYAQVLRMLGNGRLEAYCYDGVTRLGHIRGKMRKKVWVGVGDIVLVSLREYQDGKVDIIHKYNADEARSLKAYGELPDNARINETSVD--MDGAGDDDDCGFEFDDI 141
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BLAST of mRNA_S-dermatodea_contig11434.929.1 vs. uniprot
Match: A0A0P1AHC5_PLAHL (Eukaryotic translation initiation factor 4C n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AHC5_PLAHL)

HSP 1 Score: 209 bits (531), Expect = 8.090e-65
Identity = 102/122 (83.61%), Postives = 113/122 (92.62%), Query Frame = 1 
Query:    1 GKGGKNRRRGKNENEETKRELEFKEAGQEYAQVVRMLGNGRAECYCYDGVTRLGHIRGKMRKKVWVSAGDIVLVGKRDYQDDKVDIIHRYNADEARNLKQYGELPEHARINETAVDLAMEGD 366
            GKGGKNRRRGKN+NEE KR+LEFKE GQEYAQVVRMLGNGR E YC+DGVTRLGHIRGKMRKKVWV AGDI+LV  R+YQD KVD+IH+YNADEAR+LK YGELP++ARINETAVD+AMEGD
Sbjct:    6 GKGGKNRRRGKNDNEENKRDLEFKEDGQEYAQVVRMLGNGRLEAYCFDGVTRLGHIRGKMRKKVWVGAGDIILVSLREYQDGKVDVIHKYNADEARSLKAYGELPDNARINETAVDMAMEGD 127
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11434.929.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLZ6_ECTSI1.930e-8999.26Eukaryotic translation initiation factor 4C n=1 Ta... [more]
A0A7S2UW94_9STRA2.520e-8593.33Eukaryotic translation initiation factor 4C n=2 Ta... [more]
A0A7S2WRV7_9STRA2.020e-7585.93Eukaryotic translation initiation factor 4C n=3 Ta... [more]
B7FP79_PHATC4.010e-7482.22Eukaryotic translation initiation factor 4C (Fragm... [more]
A0A7S2A929_TRICV6.710e-7483.70Eukaryotic translation initiation factor 4C n=10 T... [more]
B5YN42_THAPS9.120e-7281.48Eukaryotic translation initiation factor 4C n=2 Ta... [more]
K3WDU9_GLOUD1.410e-7081.48Eukaryotic translation initiation factor 4C n=28 T... [more]
W7TWV5_9STRA2.990e-6877.94Eukaryotic translation initiation factor 4C n=2 Ta... [more]
W4GJ99_9STRA3.310e-6577.78Eukaryotic translation initiation factor 4C n=8 Ta... [more]
A0A0P1AHC5_PLAHL8.090e-6583.61Eukaryotic translation initiation factor 4C n=1 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11434contigS-dermatodea_contig11434:1897..5829 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score206.5
Seed ortholog evalue6e-51
Seed eggNOG ortholog2880.D7FLZ6
KEGG koko:K03236
KEGG Pathwayko03013,map03013
GOsGO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.translation initiation factor activity
EggNOG OGsCOG0361@1,KOG3403@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03012
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionEukaryotic initiation factor 1
Ec32 orthologEc-22_000310.1
Exons3
Model size517
Cds size303
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11434.929.1prot_S-dermatodea_contig11434.929.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig11434 2006..4318 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924203.3191566-UTR-S-dermatodea_contig11434:1896..20051622924203.3191566-UTR-S-dermatodea_contig11434:1896..2005Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig11434 1897..2005 -
1694079089.9104767-UTR-S-dermatodea_contig11434:1896..20051694079089.9104767-UTR-S-dermatodea_contig11434:1896..2005Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig11434 1897..2005 -
1622924203.3471634-UTR-S-dermatodea_contig11434:4318..43271622924203.3471634-UTR-S-dermatodea_contig11434:4318..4327Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig11434 4319..4327 -
1694079089.938097-UTR-S-dermatodea_contig11434:4318..43271694079089.938097-UTR-S-dermatodea_contig11434:4318..4327Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig11434 4319..4327 -
1622924203.3568962-UTR-S-dermatodea_contig11434:5733..58291622924203.3568962-UTR-S-dermatodea_contig11434:5733..5829Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig11434 5734..5829 -
1694079089.952259-UTR-S-dermatodea_contig11434:5733..58291694079089.952259-UTR-S-dermatodea_contig11434:5733..5829Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig11434 5734..5829 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924203.3281918-CDS-S-dermatodea_contig11434:2005..21641622924203.3281918-CDS-S-dermatodea_contig11434:2005..2164Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11434 2006..2164 -
1694079089.9227312-CDS-S-dermatodea_contig11434:2005..21641694079089.9227312-CDS-S-dermatodea_contig11434:2005..2164Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11434 2006..2164 -
1622924203.3366303-CDS-S-dermatodea_contig11434:4174..43181622924203.3366303-CDS-S-dermatodea_contig11434:4174..4318Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11434 4175..4318 -
1694079089.9308574-CDS-S-dermatodea_contig11434:4174..43181694079089.9308574-CDS-S-dermatodea_contig11434:4174..4318Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11434 4175..4318 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig11434.929.1

>prot_S-dermatodea_contig11434.929.1 ID=prot_S-dermatodea_contig11434.929.1|Name=mRNA_S-dermatodea_contig11434.929.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=101bp
MLGNGRAECYCYDGVTRLGHIRGKMRKKVWVSAGDIVLVGKRDYQDDKVD
IIHRYNADEARNLKQYGELPEHARINETAVDLAMEGDGAEDDIGIDFDGI
*
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mRNA from alignment at S-dermatodea_contig11434:1897..5829-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig11434.929.1 ID=mRNA_S-dermatodea_contig11434.929.1|Name=mRNA_S-dermatodea_contig11434.929.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3933bp|location=Sequence derived from alignment at S-dermatodea_contig11434:1897..5829- (Saccorhiza dermatodea SderLu1190fm monoicous)
GGAAAGGGTGGTAAGAACCGTCGGAGGGGAAAGAACGAGAACGAGGAAAC
GAAGCGCGAGCTGGAGTTCAAGGAGGCTGGTCAGGAGTACGCACAGGTGA
AATGAGACGTGATGACCATTTTTTTGGTTGGCTGGTCAGGAGCACGCACA
GGTGAATTGAGACGTGATGACCATTTTTTTGGTTGGCTGGTCAGGAGTAC
GCACAGGTGAAAAAGAGGCGTTATGACCATTTGATTGATTGGTCGATTTG
TTGGTTTCTTGAGAGTGTTTTTGTTGTGCTACTATTTATAATACCTGTGT
GGCACAGTACATGAGTTTCTCGACGACAGCCATTTTGAATCGTTCTCGGG
CAGCCGCTTACGCCTCTTGTCACTCTTGATTAACTTGATTTTGATTTAAT
TTTTTTTATTGATTATCACACTTATACTTGTAGCCGATCGGCTTAATCCG
ACCCGACTTGTGGTCAGATGCGCAAGGAGTCAAGGAGAAAATATACTAAT
CTTAACGCGACATGTAGAATACACAGTACCGTCCGAGGTATGATACTGTT
ACGGTTTTTAACTGTTCAGTGTTGATTTCGATAAGGTTGATTGATTGTCC
TACTGGTTGATTGATTAGTCGATCGATTGATTGATTGGTTTTTTGTTGAA
ATCGAGATGCACGGTGCAGTTTGCTTGTTATTCGCTATTTGCGTAAACGT
TGCCAGCCTTGGTTAGAACATTGGGGGTGATACATTATTCCTGTATTAGT
ATTAGTATTAGTAGGAGAAGGGGCTGTTGTTCTTTTTCGTTTGATTTTTA
GCAAACCCAAGTTTGGAGGTACAGTATGTCCTGTCCCCTCTGATTCCGAA
CGCTCGTTTGTGTTAATTCCTTCTTATGTACTGCAGTATATAGGTATTTC
CGTAAGCTTTATCGAGTACCAGTATCGATTTTTCATCTGATCGCGAGCGG
CATACGGCAACCATGGGCGAGCCGGTCGGTTGTAAGTGTGAGAATCAATC
AATCCATGTTTTTTTTTTATGTGCTACTGGCCTGTGCAGTACAGTAGGTA
CATCAGTTGCTCGACGGCAGTGTCTTCGTCTGTTCTCGGATGGCCGCGTA
CGGCTCTTGCCGTTTTTTAGTGTTGATTTCGGCATTTTAGTGCCTCGTGG
TGCGCTTTTGTATTATACGTACGCAGAGCCAGGAATGTGAAGCGAGGCGC
AGCCTCAGGCAACCATATTCATGATATCTGAGGGATCTGGTATCCACAGT
TGAGTCTGCCGCCAGACCAGTTAACGCTAGACCACGACCACCATGATAAC
ACATCATCGTCATGAGTATCACCACCATCATCACCATAATCTCCCATGAT
ATTCACGCCATCGTCTTGGCGTCCTGAACCATTATCACATCTAGGGGATC
TGGTATCCATGTCTACCGCTAGATCAGTTAGTGCTAGACCACCACCATCA
TCACCGTCATCATCACCATCACCACGTACCGAACCGTTTCTCTACCCCTC
AGGTGGTTCGCATGCTGGGAAACGGTCGAGCGGAGTGCTACTGCTACGAC
GGTGTGACTCGGCTGGGACACATCCGGGGGAAGATGCGTAAGAAAGTCTG
GGTAAGCGCCGGAGACATCGTTCTCGTCGGAAAGCGGGACTACCAAGACG
ACAAGGTGAGCTGCGTTGCTGCTATCTACTCGTAATGGCTAAAAGAAAGA
GATGGAACTCCCTTCCGACTACCTGTTTGCAGACTCGAAGTGTGGGTATT
GGTTTTCCGGATAGGCTATTATAGTATTGAAAGGGGTTGGAGCCCCTCCC
TCGTGTCCCTACACGAGAAATCACGGCGATGCGCTTTGCCTGATGCCGGT
TTTAGCTGACCTGATCTGGTATATCTTGTCTGATCTGATCTGACCTTGTC
TGATGTTGTATTATCGGATATATAATCCTGCGGAAGGCACACGAATGAAT
CTCGCTGGTCCCTGTGTTGCGGGAATAGTACTATGAATAGTGACCAGGCT
TGTTGCCGACTGCATTGCTTGACGAGCACGCGCAGAGGGTCTGCTGATTT
ATTTATGAGATCTTAGGGCCGCGGCCCTCAAAGCAGCACAGAGCGGGGCG
GGGCGGCTGTGGCTTGCTCTGATAGGGTGTGTTGACAGCACCATCCGCCG
ACAGCAGCACGTGTTTGGTCAACCTGGCAGAGACCGTTCCTCCGAAATCC
AGGCTCATGCTGATACTCAGATCTTCTGTGCCATAGGATAACACATCACA
TATATATATACACCACCAGCAGCACAACCAGGCAGCAGCTCTGCTGTGGT
GTGCGAAGGGTGAGGTAGCTCCTTCATTCCCTTCGTCACTGTCTCTTGCT
ACGGCGGGGAGGGGGGGGGGGGGTGCTGTTGGGAGGTCAGGCGTGAAGAG
GTTGTTGGGTGTTGCGCGGGTGCTGGTTCAGGCTTGTGTTCTTCGCTGTT
TGCTGCGCATGCAACCTGCGCGGCGCTATTGGTGACTTCGCAGGCGCGCG
AAAAAATTGTGACACATTTACAGAATCACACGAAAGATACCCCTCGAGAA
TTTCTGTTGACCGGCGGTACATATACGCGGGGACTCATGATGACTCACGA
TTTGGAAGTTGAGTTTGTCTTTTCGCGCGATGTATACACACTAGTCCACC
TGTACATTTATAGTCNNNNNNNNNNGTTTCCCCTGAATGAGTGTGCTCGT
GAGTTAGGGATGTACATGGGAACTAGATTTTGATTTTTTATTAAAAAAAA
GCGTGGGTTTGAAGACTCCCATGACCATGGAGACGAACAATGACAGCGGG
AACCCTTTTAACGCAAAGCAGTAGAGCGCCACGACAACAGTAAACAGTTT
ATCTCGTAGCGGATGTATCGGCATGGCGGGTCGAAGTAGCGGGGGGGGGG
GGGGGGGGGGGGGCCCCGACGCCGGGGGGGGGGGGGGGGGGGGGGTAGAA
AAAAAGGGAAAACAAACAAACAAGAAAAAAAGANNNNNNNNNNAACGAAA
AAAAAGAAAAAAAAATAAAAAATGTGAGTGAAGGGGGGAGGGGGGGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGATG
CCCGATGCCAGTGGCGCGGTGTCGTTGAGAGTTAGAAATACGGGGCAAAC
ATACACACAAGCAAGCAAGAATTGCGTTTTGGTATAGCCGTTTTTTTTTT
TCAATTAGGGTGGGGGAAAGCCAATGTTCTATATAGCGAACACTAGGAAG
TAGGAGCTTGTGTGGTTTGACATGACCTTGTATGGTCTGATCGGAGATGA
GCTTTTATCGTCTCTGATCTAATATTTTATGTTCTGGTCTGAGATCTTGT
TTGACCTTGTATCAATCTGATCGAATCTTGAACCATCTGGTCTGAGCCTG
TATGACCTTGTATCGTCTGGTCTGAGCTTGTATGATCTTGTATCAATCTG
ATCTGATCCCGTATGGCTTTGCATGGTCTGATCTGATATGATATTGTATG
ATCTCACATGAGCTGAGCCTGTATGACCTTATATCGTCTGGTCTGAGCTT
GTATCGTCTGAACGGATATGAGCTTACATGGTCTGCTCTGGTCTTGTATC
TGATGTGCACTGATTCTGATTATGATCTGACATCGGTGTCGCTTTTTTTC
TTTTTTTTCTTGCAGGTTGACATAATCCACCGTTATAACGCCGACGAGGC
ACGTAACTTGAAGCAATACGGAGAGCTCCCGGAGCACGCGCGAATCAACG
AAACCGCAGTGGACCTGGCAATGGAGGGAGACGGAGCGGAAGACGACATC
GGCATCGACTTCGACGGGATCTAGGGCGTACTGGTACTCAAAGACAAAAT
CACGCCTCTGCTATCAGACCATTGACCAGACGTCCTCGGGAGAGGACGGA
GGGGTCATTGTTCCCTCAGGATCGATCGATCAA
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Coding sequence (CDS) from alignment at S-dermatodea_contig11434:1897..5829-

>mRNA_S-dermatodea_contig11434.929.1 ID=mRNA_S-dermatodea_contig11434.929.1|Name=mRNA_S-dermatodea_contig11434.929.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=606bp|location=Sequence derived from alignment at S-dermatodea_contig11434:1897..5829- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGCTGGGAAACGGTCGAGCGGAGTGCTACTGCTACGACGGTGTGACTCG
GCTGGGACACATCCGGGGGAAGATGCGTAAGAAAGTCTGGGTAAGCGCCG
GAGACATCGTTCTCGTCGGAAAGCGGGACTACCAAGACGACAAGATGCTG
GGAAACGGTCGAGCGGAGTGCTACTGCTACGACGGTGTGACTCGGCTGGG
ACACATCCGGGGGAAGATGCGTAAGAAAGTCTGGGTAAGCGCCGGAGACA
TCGTTCTCGTCGGAAAGCGGGACTACCAAGACGACAAGGTTGACATAATC
CACCGTTATAACGCCGACGAGGCACGTAACTTGAAGCAATACGGAGAGCT
CCCGGAGCACGCGCGAATCAACGAAACCGCAGTGGACCTGGCAATGGAGG
GAGACGGAGCGGAAGACGACATCGGCATCGACTTCGACGGGATCTAGGTT
GACATAATCCACCGTTATAACGCCGACGAGGCACGTAACTTGAAGCAATA
CGGAGAGCTCCCGGAGCACGCGCGAATCAACGAAACCGCAGTGGACCTGG
CAATGGAGGGAGACGGAGCGGAAGACGACATCGGCATCGACTTCGACGGG
ATCTAG
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