mRNA_S-dermatodea_contig10844.572.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig10844.572.1
Unique NamemRNA_S-dermatodea_contig10844.572.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig10844.572.1 vs. uniprot
Match: D7FNP3_ECTSI (Poly(A) binding protein, cytoplasmic 4-like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNP3_ECTSI)

HSP 1 Score: 374 bits (960), Expect = 1.580e-122
Identity = 224/339 (66.08%), Postives = 250/339 (73.75%), Query Frame = 1 
Query:    1 ARQGVELAGRRVRVGWAQKNTSLYVGGLEAG-ITTDMLVREFARFGPLDKELTAIKPGAKFGFVKYRYRLHAETAKKELNERPAFGGLCPALHIEWNSVESGSRADGSETAASTDENTTDGGXXXXXXXXXXXS---------------------GHMRHQSRGEGGSSNTVHVQFEGEQSRVSAVNEAMIRKTFTQWEPLVDVVIPASRYNGVSPGPRQLPRCWGFVHFPPTPDGEHAAKDAMQALNGTTIAEMKVHCTMNRTSGGS---GNTWRRQGGMGIAERGGKSRRHSSGGADDGRAMMHG---QGFGGRPARSSMESPGARGGXXXGWGGNV 933
            A QGVEL GRRVRVGWAQKNTSLYVGGLE G ITT+MLVREFARFGPLDKELT IKPGAKFGFVKYRYRLHAE AKKELNERPAF GLCP+L IEWNSVES ++A  SETA S         XXXXXXXXXXX                       H RH  RGE  SS+TVHVQFEG+Q  VSAVNE MIRK FT+WEP+VD+VIPASR+NGVSPGPRQLPRCW FVHFPPTPDGE AA DA++ LNGTTI+E++VHCTM+R  GGS   G+ WR+QG         ++RRHS+      RAM H    QGFGGRP+RSS++ PGA+ G   GWGG +
Sbjct:  265 AMQGVELGGRRVRVGWAQKNTSLYVGGLEGGAITTEMLVREFARFGPLDKELTTIKPGAKFGFVKYRYRLHAEAAKKELNERPAFDGLCPSLEIEWNSVESSAQA--SETAGSEKSTAXXXXXXXXXXXXXXXXKEXXXXXXXXXXXXXXXXXXXAHSRHP-RGEV-SSHTVHVQFEGDQGHVSAVNEVMIRKCFTKWEPVVDIVIPASRFNGVSPGPRQLPRCWAFVHFPPTPDGERAAADAIKGLNGTTISELRVHCTMSR--GGSTRAGSPWRKQGXXXXXXN--RARRHSTXXXXXDRAMGHAXXXQGFGGRPSRSSLDHPGAQQGRSGGWGGQM 595
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BLAST of mRNA_S-dermatodea_contig10844.572.1 vs. uniprot
Match: A0A6H5L4J2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4J2_9PHAE)

HSP 1 Score: 340 bits (872), Expect = 5.050e-108
Identity = 196/277 (70.76%), Postives = 215/277 (77.62%), Query Frame = 1 
Query:    1 ARQGVELAGRRVRVGWAQKNTSLYVGGLEAG-ITTDMLVREFARFGPLDKELTAIKPGAKFGFVKYRYRLHAETAKKELNERPAFGGLCPALHIEWNSVESGSRADGSETAASTDENTTD---------------------GGXXXXXXXXXXXSGHMRHQSRGEGGSSNTVHVQFEGEQSRVSAVNEAMIRKTFTQWEPLVDVVIPASRYNGVSPGPRQLPRCWGFVHFPPTPDGEHAAKDAMQALNGTTIAEMKVHCTMNRTSGGS-GNTWRRQG 762
            A QGVEL GRRVRVGWAQKNTSLYVGGLE G ITT+MLVREFARFGPLDKELT IKPGAKFGFVKYRYRLHAE AKKELNERPAF GLCP+L IEWNSVES ++A  SETA S      D                       XXXXXXXXXXX  H RH  RGE  SS+TVHVQFEG+Q  VSAVNE MIRK FT+WEP+VD+VIPASR+NGVSPGPRQLPRCW FVHFPPTPDGE AA +A++ LNGTTI+E++VHCTM+R  G S G+ W +QG
Sbjct:  128 AMQGVELGGRRVRVGWAQKNTSLYVGGLEGGAITTEMLVREFARFGPLDKELTTIKPGAKFGFVKYRYRLHAEAAKKELNERPAFDGLCPSLEIEWNSVESSAQA--SETAGSEKSTAEDRTXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXAHSRHP-RGEV-SSHTVHVQFEGDQGHVSAVNEVMIRKCFTKWEPVVDIVIPASRFNGVSPGPRQLPRCWAFVHFPPTPDGERAAANAIKDLNGTTISELRVHCTMSRGGGTSAGSPWSKQG 400
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BLAST of mRNA_S-dermatodea_contig10844.572.1 vs. uniprot
Match: W7TSQ6_9STRA (Tia1 cytotoxic granule-associated rna binding protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TSQ6_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 4.210e-16
Identity = 68/248 (27.42%), Postives = 118/248 (47.58%), Query Frame = 1 
Query:    7 QGVELAGRRVRVGWAQKNTSLYVGGLEAGITTDMLVREFARFGPLDKELTAIKPG--AKFGFVKYRYRLHAETAKKELNERPAFGGLCPALHIEWNSVESGSRADGSETAASTDENTTDGGXXXXXXXXXXXSGHMRHQSRGEGGSSNTVHVQFEGEQSRVSAVNEAMIRKTFTQWEPLVDVVIPASRYNGVSPGPRQLPRC---WGFVHFPPTPDGEHAAKDAMQALNGTTIAEMKVHCTMNRTSGG 735
            QG ++ GRR+R+GWAQ+NT+L++G L+     + L R F  FG L    + ++ G   K+G VK+  R  AETA++E++ R    G  P + + W+  ++ ++  G      ++E  +                 +   SR       +VHV FE +    + V E +I   F  +  ++ V++P       S     +  C   +GFVHF  +  G   A +A++ L G  +A +++ C  +R  GG
Sbjct:  167 QGADIQGRRIRIGWAQRNTTLFIGDLDESTNVEDLHRTFGPFGLLYTNDSYLRQGKCGKYGSVKFMSRKDAETARREMHGRVLRDGTRP-IRVVWHHPQTITKKTGLSVPLPSNEQHS----RELVHIPPPPPAGVLVSSR-----PYSVHVHFEAD-GMENLVTENLIYGLFAPFGQIIAVILPQGPGILCSDQNEDVSCCRRGYGFVHFTGSALGRLCAIEAIRTLQGEIVAGIRLQCAFSRKPGG 403
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BLAST of mRNA_S-dermatodea_contig10844.572.1 vs. uniprot
Match: A0A7S3DFR0_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3DFR0_9EUKA)

HSP 1 Score: 88.2 bits (217), Expect = 7.190e-16
Identity = 41/97 (42.27%), Postives = 64/97 (65.98%), Query Frame = 1 
Query:   10 GVELAGRRVRVGWAQKNTSLYVGGLEAGITTDMLVREFARFGPLDKELTAIKPGAKFGFVKYRYRLHAETAKKELNERPAFGGLCPALHIEWNSVES 300
            G  +  R +R+GWAQKNT+L++G L+A +T+++L  EF +FGPL +E T +K G  +GFV++R R  AETAK+E+  +   G +   + I W   +S
Sbjct:   89 GARIGERAIRLGWAQKNTNLFIGDLDASVTSEILFNEFKQFGPLFEEDTFVKEGMSYGFVRFRKREDAETAKREMQGKNFHGRV---IRIGWGDAKS 182
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BLAST of mRNA_S-dermatodea_contig10844.572.1 vs. uniprot
Match: A0A836CDW8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDW8_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 2.050e-13
Identity = 90/303 (29.70%), Postives = 125/303 (41.25%), Query Frame = 1 
Query:   16 ELAGRRVRVGWAQKNTSLYVGGLEAGITTDMLVREFARFGPLDKELTAIKP-GAKFGFVKYRYRLHAETAKKELNERPAFGGLCPA-LHIEWNSVESGSRADGSETAASTDENTTDGGXXXXXXXXXXXSGHMRHQSRGEGGSSNTVHVQFEGEQ-SRVSAVNEAMIRKTFTQWEPLVDVVIP---------------------------------------ASRYNGVS---------------PGPRQLP----RCWGFVHFPPTPDGEHAAKDAMQALNGT-TIAEMKVHCTMNRTSGGS 738
            E+ GRR+RVGWAQKN +L V GL  G+T + +   F  FG L++E T +   G+    VKYR RLHAE A+++LN   A G   PA L ++W S  +G    G+++ A+       GG                            V V  EGE  S +  V E ++R  F  + PLV V  P                                       A+   G+S               P P   P    R +  V FPPT  G+  A  AM A++GT T + +KV C++ R+ G S
Sbjct:   80 EVHGRRIRVGWAQKNAALAVSGLPDGVTAEQVKALFRPFGALEEENTQLMTDGSGTAVVKYRNRLHAEDARRQLNGSQALG---PAPLRVDW-SAPAGGAVGGAQSKAAPHR----GGREATAPAPCR------------------VQVMLEGEAASDLQEVEETVLR-LFQDFAPLVSVSTPRAEAARAPSAAKAGQDAXXXXXXXXXXXXXXXXXTAPKEAAPATGMSAADALVADTQGLQLRPRPLHKPARPQRAYCAVTFPPTRAGQARAMAAMAAISGTVTPSGLKVTCSLIRSEGRS 355
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BLAST of mRNA_S-dermatodea_contig10844.572.1 vs. uniprot
Match: L8H825_ACACA (RNA recognition motif domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H825_ACACA)

HSP 1 Score: 79.0 bits (193), Expect = 8.600e-13
Identity = 39/89 (43.82%), Postives = 59/89 (66.29%), Query Frame = 1 
Query:   19 LAGRRVRVGWAQKNTSLYVGGLEAGITTDMLVREFARFGPLDKELTAIKPGAKFGFVKYRYRLHAETAKKELNERPAFGGLCPALHIEW 285
            + GR +R+GWAQKNT+L++G L+  IT+  L   F +FGP+ +E T +K    +GFV++R+R HAE AK+E+N +   G    A+ I W
Sbjct:  128 VGGRAIRIGWAQKNTNLFIGDLDPSITSAQLREVFRQFGPIYEEETFVK-NRNYGFVRFRHRKHAEMAKREMNNK-VLGAR--AIRIGW 212
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BLAST of mRNA_S-dermatodea_contig10844.572.1 vs. uniprot
Match: A0A7S0TF52_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Elphidium margaritaceum TaxID=933848 RepID=A0A7S0TF52_9EUKA)

HSP 1 Score: 76.6 bits (187), Expect = 2.510e-12
Identity = 40/79 (50.63%), Postives = 57/79 (72.15%), Query Frame = 1 
Query:   10 GVELAGRRVRVGWAQKNTSLYV---GGLEAGITTDMLVREFARFGPLDKELTAIKPGAKFGFVKYRYRLHAETAKKELN 237
            G+E+AGR +R+GWAQKNT+L+V   G +E  IT + L   F+ FGP+ +E T +K   K+GFVK+++RLHAE AK  L+
Sbjct:   67 GLEIAGRAIRIGWAQKNTNLFVCLVGDVERHITGEHLREIFSEFGPIYEEDTFVKRN-KYGFVKFKHRLHAEKAKAALD 144
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BLAST of mRNA_S-dermatodea_contig10844.572.1 vs. uniprot
Match: A0A7S0DL40_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DL40_9EUKA)

HSP 1 Score: 72.0 bits (175), Expect = 2.040e-10
Identity = 37/79 (46.84%), Postives = 52/79 (65.82%), Query Frame = 1 
Query:    1 ARQGVELAGRRVRVGWAQKNTSLYVGGLEAGITTDMLVREFARFGPLDKELTAIKPGAKFGFVKYRYRLHAETAKKELN 237
            A  GVE++GR++R GWAQ+NT+L+VG L+  I   +    F+R+G L  + T  K    FG VK++ R +AETAK ELN
Sbjct:  135 ALHGVEVSGRKIRTGWAQRNTTLFVGDLDNTIDATVYRTAFSRYGNLVDDETYFKVDKGFGMVKFKTRENAETAKVELN 213
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BLAST of mRNA_S-dermatodea_contig10844.572.1 vs. uniprot
Match: A0A7S2RB19_9STRA (Hypothetical protein n=4 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RB19_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 2.710e-10
Identity = 41/110 (37.27%), Postives = 59/110 (53.64%), Query Frame = 1 
Query:   10 GVELAGRRVRVGWAQKNTSLYVGGLEAGITTDMLVREFARFGPLDKELTAIKPG-------------AKFGFVKYRYRLHAETAKKELNERPAFGGLCPALHIEWNSVES 300
            G E+AGRRVRVGWA KN++L V  L+ G++ + L+  FARFGPLD + + ++P              A     K+  R HAE+AK+ L+         P L ++W    S
Sbjct:  116 GREVAGRRVRVGWAMKNSTLVVKDLDPGLSEEDLLNAFARFGPLDLDQSGVRPAEPCSEEEEAGGSTALQAVFKFTQRTHAESAKQNLSGMMLASSSAP-LRVDWAGASS 224
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BLAST of mRNA_S-dermatodea_contig10844.572.1 vs. uniprot
Match: A0A7S3Z8S4_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Z8S4_9EUKA)

HSP 1 Score: 71.6 bits (174), Expect = 2.930e-10
Identity = 37/79 (46.84%), Postives = 51/79 (64.56%), Query Frame = 1 
Query:    1 ARQGVELAGRRVRVGWAQKNTSLYVGGLEAGITTDMLVREFARFGPLDKELTAIKPGAKFGFVKYRYRLHAETAKKELN 237
            A  GV ++GR++R GWAQ+NT+L+VG L++ +        FAR+G L  + T  K    FG VKY+ R +AETAK ELN
Sbjct:  168 ALHGVVVSGRKIRTGWAQRNTTLFVGDLDSFVDESEYRAAFARYGSLVLDETYFKVDKGFGMVKYKTRENAETAKMELN 246
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10844.572.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D7FNP3_ECTSI1.580e-12266.08Poly(A) binding protein, cytoplasmic 4-like n=1 Ta... [more]
A0A6H5L4J2_9PHAE5.050e-10870.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W7TSQ6_9STRA4.210e-1627.42Tia1 cytotoxic granule-associated rna binding prot... [more]
A0A7S3DFR0_9EUKA7.190e-1642.27Hypothetical protein n=1 Tax=Palpitomonas bilix Ta... [more]
A0A836CDW8_9STRA2.050e-1329.70Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
L8H825_ACACA8.600e-1343.82RNA recognition motif domain containing protein n=... [more]
A0A7S0TF52_9EUKA2.510e-1250.63Hypothetical protein (Fragment) n=1 Tax=Elphidium ... [more]
A0A7S0DL40_9EUKA2.040e-1046.84Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
A0A7S2RB19_9STRA2.710e-1037.27Hypothetical protein n=4 Tax=Rhizochromulina marin... [more]
A0A7S3Z8S4_9EUKA2.930e-1046.84Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10844contigS-dermatodea_contig10844:1907..7586 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score379.4
Seed ortholog evalue1.6e-102
Seed eggNOG ortholog2880.D7FNP3
KEGG rclassRC00331,RC00418,RC02600
KEGG koko:K17989
KEGG ReactionR00220,R00590,R00996
KEGG Pathwayko00260,ko00270,ko00290,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map00290,map01100,map01110,map01130,map01200,map01230
KEGG ModuleM00570
EggNOG free text desc.RNA binding
EggNOG OGsKOG0145@1,KOG0145@2759
Ec32 ortholog descriptionRNA recognition motif domain
Ec32 orthologEc-01_004780.1
EC4.3.1.17,4.3.1.19
COG Functional cat.DU
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryother localisation
Exons6
Model size933
Cds size933
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10844.572.1prot_S-dermatodea_contig10844.572.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig10844 1907..7586 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924176.7155356-CDS-S-dermatodea_contig10844:1906..21371622924176.7155356-CDS-S-dermatodea_contig10844:1906..2137Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10844 1907..2137 -
1694079070.4781935-CDS-S-dermatodea_contig10844:1906..21371694079070.4781935-CDS-S-dermatodea_contig10844:1906..2137Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10844 1907..2137 -
1622924176.7244213-CDS-S-dermatodea_contig10844:3370..34781622924176.7244213-CDS-S-dermatodea_contig10844:3370..3478Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10844 3371..3478 -
1694079070.491057-CDS-S-dermatodea_contig10844:3370..34781694079070.491057-CDS-S-dermatodea_contig10844:3370..3478Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10844 3371..3478 -
1622924176.7330432-CDS-S-dermatodea_contig10844:4203..43231622924176.7330432-CDS-S-dermatodea_contig10844:4203..4323Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10844 4204..4323 -
1694079070.5004828-CDS-S-dermatodea_contig10844:4203..43231694079070.5004828-CDS-S-dermatodea_contig10844:4203..4323Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10844 4204..4323 -
1622924176.7425365-CDS-S-dermatodea_contig10844:5277..54711622924176.7425365-CDS-S-dermatodea_contig10844:5277..5471Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10844 5278..5471 -
1694079070.509653-CDS-S-dermatodea_contig10844:5277..54711694079070.509653-CDS-S-dermatodea_contig10844:5277..5471Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10844 5278..5471 -
1622924176.7572017-CDS-S-dermatodea_contig10844:6466..65741622924176.7572017-CDS-S-dermatodea_contig10844:6466..6574Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10844 6467..6574 -
1694079070.5183163-CDS-S-dermatodea_contig10844:6466..65741694079070.5183163-CDS-S-dermatodea_contig10844:6466..6574Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10844 6467..6574 -
1622924176.769523-CDS-S-dermatodea_contig10844:7414..75861622924176.769523-CDS-S-dermatodea_contig10844:7414..7586Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10844 7415..7586 -
1694079070.5264957-CDS-S-dermatodea_contig10844:7414..75861694079070.5264957-CDS-S-dermatodea_contig10844:7414..7586Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10844 7415..7586 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig10844.572.1

>prot_S-dermatodea_contig10844.572.1 ID=prot_S-dermatodea_contig10844.572.1|Name=mRNA_S-dermatodea_contig10844.572.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=311bp
ARQGVELAGRRVRVGWAQKNTSLYVGGLEAGITTDMLVREFARFGPLDKE
LTAIKPGAKFGFVKYRYRLHAETAKKELNERPAFGGLCPALHIEWNSVES
GSRADGSETAASTDENTTDGGGADGSESASQHSGHMRHQSRGEGGSSNTV
HVQFEGEQSRVSAVNEAMIRKTFTQWEPLVDVVIPASRYNGVSPGPRQLP
RCWGFVHFPPTPDGEHAAKDAMQALNGTTIAEMKVHCTMNRTSGGSGNTW
RRQGGMGIAERGGKSRRHSSGGADDGRAMMHGQGFGGRPARSSMESPGAR
GGGGGGWGGNV
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mRNA from alignment at S-dermatodea_contig10844:1907..7586-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig10844.572.1 ID=mRNA_S-dermatodea_contig10844.572.1|Name=mRNA_S-dermatodea_contig10844.572.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=5680bp|location=Sequence derived from alignment at S-dermatodea_contig10844:1907..7586- (Saccorhiza dermatodea SderLu1190fm monoicous)
GCTCGTCAGGGGGTGGAGCTGGCCGGCAGGCGCGTCCGAGTGGGCTGGGC
TCAGAAGAACACATCACTTTACGTCGGCGGTCTCGAGGCGGGAATAACGA
CCGACATGCTCGTTCGCGAGTTCGCCCGCTTCGGCCCCCTCGACAAGGAG
CTCACAGCGATCAAGCCCGGAGGTGTGTCCCCGTGTCTGTCTGTGTGTCT
GTCTGTTCCTGTGTCTGTTTTATGTGTTTGGTCAGAGAAGGAAGACGAAG
ACAGAGGGGCCAGAAAAAACTACATTGTAGTTTCCGCTCGTCTTTCCCTG
CACATCAATGTTGCCTCCCCCCCCTCTCCCTTCCCTTCCCCTTCCCTTCC
CCTCCCCTCCCGCCCCGCCTCATCCCCCTCCCCCTGCAGCTATGCATATT
TATGTATGCAATCATTTGGTTGTCCGCTTCGAATGATGGCGGTTGCGCGA
GGTCTTTTTCCTTGGGACAAGGAGGGTTCCATGTGTGGGGGTTCCGTTTC
AGAGCCTCCGGGCGGCTGTTCCATGTACAAGCTGTTTTCTTTTGGGTTTC
GTTTTGGTTCATCAATCGTAAGTGTTATTTTTAGCTCAGGTCCGCACCCG
GCACCCTCGTCCCCCTCTCCGCTTGCGCGCGCGCCGATAAATGCTCTGCT
TCCCCGTATCCACGAATAATCTTCTAAACCTTTCGCCTTTGTGTTCCTCT
TAACAACTACAAAAATGAACGGAGCGTAGTGCTATGGTGTGTATATGCTA
TGAGACGTGCACACACTGCCGCATCCTTTGGCGGCACCGTCTCTTCTTGT
TCTTGTTCTTTTCAAGCAACAAAAACGTCAGAGGCCCATGCTGGTGCTGC
TCTGACTGACCATCCCATCCATTCGCCTGTCGCCCTCTTGCTTTTCTTCT
TATGCTTGTTGTTTACCTCCCCTGCTCTTTTTTCTTGCCCTCTCGCGGTC
CGCGGCGGCATGTGTCCGCCCGGCCCTCGCGAACGGAAAAAAAACAACAA
CAAACACAACAGCCAAGTTTGGGTTCGTCAAGTACCGCTACCGGCTGCAC
GCCGAGACCGCCAAGAAGGAACTGAACGAGCGCCCTGCCTTCGGTGGCCT
TTGCCCCGCCCTTCACATCGGTGAGCACACGGACGCCCTTGCCGCAACGG
CGCCGTCCCGGGCGGTGGTGGTGGAGCTACTACCCTGGCCGGCAGACCGT
AGTGTATCCCGTCCTCCCCCCCCCCCGAGCCTAAGGATTTACGACTTCGA
TATGCGGGTTGGCTCGTGTTCGATAGGGTGCGAACGCGTGGTGGCCGCCC
CATTTTGCTCTGCGGCGAGGACCACGCCTCGTCTGCTCGTTTTCGCGCGC
TCGGTAGACGATACCGGCTTGTAGCGGTGGAGCTGTTGCTGTCTTAGCGG
TACTGCGAGGACAGCGGTGCGCGTCTCCCACCACAGGAAATAAAACGAAA
GAAAGCAACCAGGACCTTGCTTTTGTTGGCTGGGGAGCCACCCGTTCGTT
GGTCCTCTGGGCTGCTGCTGCTGCCCCCCCGCCTACAGGGGTGGAAATTA
TGGGGCTATCCTAGCGGTTCGCGAATATTTTCCAGGCTCCCTCGCTTTCC
GGCACACCTTTTCCTCGTCTTTTTCGGCCGATCATTATTCCATTATTGGT
ACAGGTAGGTACGCGTGCATAGAGAGCAGGCCTGCTTTTTCGGCGTGCCT
GCTGGGCGCCTACCTCTCAAAACAAAACACACGGTTGCATTCTATTTCAT
GTATTTCTCCCCCCTCCCCCTCCCCTTCCCCACGTATCCATAGATCCATG
GCGTGCTCGGTTTGATATCGCAAACTCACGGATGATGACTAGCAGGCTGG
TATCATCCTTGTGAGACGCAGCACGCCAGGCCGGCGAAAAAACTAGCATA
CCGCTCCGTGTTGGCATTTTGTTGGTGTGCGTGGTCTATGTCCGCGTACA
TACGACATGCGTTAAGCTAGGTAGACCCTCCCCGCCCGCCCGACCAACCC
TGTGAGAACAATCGTCCGTCATCCCGAAGACGGACTCGTCGTCAATGGCC
TAACAGCTAAATGAGTGCAAAACTTGAGTATCCCCCCCCCCCTCCTTCCC
CCCCCTGTTGCGCAGAATGGAACAGCGTCGAATCGGGCTCGCGCGCGGAC
GGTTCCGAAACGGCGGCCTCGACCGACGAAAACACTACCGACGGGGGGGG
TGCCGACGGGTCGGAGTCAGCGTCTCAGCACTCAGGACACATGCGCCACC
AATCCCGCGGGGAGGGCGGATCGAGCAACACCGTCCACGTGCAGTTCGAG
GGTGAACAGGTGAGGCGTGCCTTGCGTGGGCCGTTGGGTCGTGACAATTG
GCACCGTGTGTGTACGCAGTAGCATATATGTATATATGTATGTGTATGTA
TGTGTATGTATGCACGCTGCGAGTCTGTCTGTTTGCCTCTTCGTCTTTCG
TGTGGGTGCTGTGTTTGCTTTTGTTTCGCGTTTCGTTGAGAGACAGAGAC
AGATAGAGAGCGTCACGGCCGCGCGCCGCCGCACCCGCGGTTGCCGTCGT
TTGCGGGTCGTGTGCACACCTTGTGGGGGTTGGAGGCGTGAGGGTGTTGA
GTTGCAGCGCGCAGCGCGCCCTCGTCATGGCACCAAAGAAGCGGTTATGT
CACTCACGTTCGAGTTCGTGTCGTGCCGACTGTGAAGAATAAAATTGCCT
CCTCGGCCGTCCGCGTCATGTAATGTCTGTATGCATTACATGTATGCACA
CCGGAAGAAGCGGAAGCGACAACGGCGTTCGTTCTTCAAGCGCGAATTCA
ATAAAACCTCTATACAATGTTTATTTCCGTTTACGGAGAATACCGACACT
GATGGGTGAATCTGGCATCATCAATCCTTTTGTTTGTCGCCGTGGCCTTG
CTTTAGTTCTCTGATAACCCATGCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCGGCGAGCTCCCCCCCCCCTACCACGAAAAACCAC
CAAGCCGACCACCCCCCACCACCNNNNNNNNNNCGGGCGTCTCCCATCCT
TTTTGTTGTTCCCCTTGCCCTTTTTTAGTTCTCTTATAACCCCCGCCCCC
CCCCCCCCCCCATGCTCCGTCCTCCCGAGGACGCTTGGTCAATGGCCTAA
CACCTAGGCAGCAATACTTGAGTACGCCCCACCACCCCACCGCACCCCAA
CCCACCCCACCCCCCCTCTCGCGCGCACGCACGCACGCGCGATTTGTTCT
CCTATAACAACAGAGCCGCGTGTCCGCAGTGAACGAGGCCATGATCAGAA
AGACATTCACACAGTGGGAGCCCCTCGTCGACGTCGTCATTCCCGCTAGC
CGGTACAACGGGGTGTCGCCCGGACCGCGCCAGGTATGATACACGTAGAG
GTTAGCTGCGGTGCCTATGGCGCTTCAGAAACGCTGAGAAACTACAGCAT
CTTACACACACAGAGATGCAGATAGAGCGGTTTGGTTCGGAAGCGACCCA
GATAAAAACCGAGTCAGTTGCTCTGTTCACGCGCGTGCTTTTTGCCCGCT
CATGACACACAACACGACACTCTGTTTTGCGGTTTGTGGCTTTTGCCGCG
GGAGAGGGGGGTGCGGGCGGCGGCGGGGGAGGTTCTCGTGGATTCTGGTT
GATGATAATGTTTCTTTGCGAATTTTTACATGTACCATGGTACAGTAGTA
CGAGGCACGTATGTTAGGTGTCTTATTTCCACTTTTCAGTCTCGCGCGAA
AAACAAAACAGGACACGGCAACAATTTCTGACCTTATTACATCACATGGT
ATTCAATATGCAAAATACAAAACTCCCCGGAAAAGAACAAAAATTGTCTT
GGTGAGGCTTGTTTCTCACACGCTCCTCCCATCTCCTCCTCCTTCCCCAC
CGCCGCCGCTGCCGCTGCCACCACTGCTGCAACGCTCGCGTCCGTACGTT
AATGTTCTTGCTTATGTTTTTTCATTCGATATTCTCGTCCTCATCGCTGC
GATCCGATTCCGACCCGATCCGATTTTCCGATCCGATCGACGCGTTTTAC
CGCACAACGAATCCGGCCCGACCCGATGTCTTTGGCTGTTTTTGTGTTGC
CTCGCTAGCTTCCCCGATGTTGGGGTTTCGTACACTTCCCGCCGACCCCG
GACGGGGAGCACGCGGCAAAAGACGCCATGCAGGCTCTCAACGGGACCAC
GATCGCAGAGATGAAGGTGGGAGGGAGGTCAAGGCCGAACGGCAAAATCA
CTCGCTCACTTACTGATCCACTCGGGCGGCCGTGGCGGTCGGTGGCTGTG
TGTTTTCATCGTGTAAAGCGCGTCAAAATCCGGTCCTCTATTTGCCGCCT
GGCTGGTGGTGCCTGTGTTTCGCAGCGCGGCGACGGCCGGGTGTGTTTTG
ATCGCGGGTGAGTGGGTAGGTGTGTGGGTCGATGAGTGGGCGGGTCAGTG
GGTGGGTGGGTGTGTTCCGTCCTTGTCGTCTGACTCCCCGCGGCGGGTCG
CCGTCGCCGAGCGGATGGATGAATGGATGGATGAGGTGAGGTGGGAGTTT
GAGGGTTGCGCCGGTCGAAAATCCCGAAAGAAGTGGGTGGCGTGGTGTGG
CGTGTGTTGTTTCGCGGTGTTGATACCCCCCCGCCCCCCCCTCGACCACC
CTCCAAGTCCAGTCACATGTGGCGTCTCTTTGTGCGTTGTGTGTGTGCGT
ACGTGAGTTGTTTTTACTAGTTTCCATGGTGACTTCCTCCAAAGGCGCTC
GCGCGACTCCCGAGCAATTGACTCTTACACACAAGAGACATACTAATTGT
CTACAGCGCTGCTGCTACTGCGCGCATCGAACAACTCCCCCTCTCGATCT
TTCGCACGCGCCCCCATCGCGTCACACCCGTTCAACCTCCCCGTCCCCCC
CACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACCACCCTCTTCTTG
CTTGATGGAATACAGCTGCNNNNNNNNNNCCCCCTCTCGATCTTCCACAC
GCCCCCCCCCCGCCCCCCCCCCCTTCCTCCCCCCCCCCCCATCCCACCCC
CCCCCCCCCCCCCCTGCTCACCAAATACTGTGTTTGTATTGAATGAGGCA
CCGGCGTGCAACAAAAGCTTCTTGTTGTGTAAAATATCGTGCATCCATCG
CATGGTGATGAGAGAGATTTTCTCTACTCTAGGCGAGTTTATGAAGCAAT
AGTATTAATAGTATGATTTTACCGCAATTTACGTCCATCCACGGCAGCAG
AAGAAAGCAGTATATCATAAACAATATGTGTATTACACCAGTGCCGGGCG
GCGGCACGAGTACAGCATGTGCGTGCGGCGCTACCGCTGCATAGTACTGC
TGTAGTATCATCACAAGGGATTAATTATTTCATCATTGCTCCCCTCCCTT
CTGCCTCTCTCGCTCGCCCTCGTCCGGTCCACGCCCGACGTGTAAACAGG
TGCACTGCACCATGAACCGCACCAGCGGCGGAAGTGGCAACACCTGGAGG
AGGCAGGGCGGTATGGGCATCGCCGAGCGCGGGGGCAAGTCCCGAAGGCA
CAGCAGCGGCGGGGCGGACGATGGCCGAGCGATGATGCACGGGCAGGGCT
TCGGCGGGAGGCCCGCGAGGTCCTCGATGGAGTCGCCGGGGGCGCGAGGC
GGAGGCGGCGGCGGGTGGGGCGGAAACGTG
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Coding sequence (CDS) from alignment at S-dermatodea_contig10844:1907..7586-

>mRNA_S-dermatodea_contig10844.572.1 ID=mRNA_S-dermatodea_contig10844.572.1|Name=mRNA_S-dermatodea_contig10844.572.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1866bp|location=Sequence derived from alignment at S-dermatodea_contig10844:1907..7586- (Saccorhiza dermatodea SderLu1190fm monoicous)
GCTCGTCAGGGGGTGGAGCTGGCCGGCAGGCGCGTCCGAGTGGGCTGGGC
TCAGAAGAACACATCACTTTACGTCGGCGGTCTCGAGGCGGGAATAACGA
CCGACATGCTCGTTCGCGAGTTCGCCCGCTTCGGCCCCCTCGACAAGGAG
CTCACAGCGATCAAGCCCGGAGGCTCGTCAGGGGGTGGAGCTGGCCGGCA
GGCGCGTCCGAGTGGGCTGGGCTCAGAAGAACACATCACTTTACGTCGGC
GGTCTCGAGGCGGGAATAACGACCGACATGCTCGTTCGCGAGTTCGCCCG
CTTCGGCCCCCTCGACAAGGAGCTCACAGCGATCAAGCCCGGAGCCAAGT
TTGGGTTCGTCAAGTACCGCTACCGGCTGCACGCCGAGACCGCCAAGAAG
GAACTGAACGAGCGCCCTGCCTTCGGTGGCCTTTGCCCCGCCCTTCACAT
CGCCAAGTTTGGGTTCGTCAAGTACCGCTACCGGCTGCACGCCGAGACCG
CCAAGAAGGAACTGAACGAGCGCCCTGCCTTCGGTGGCCTTTGCCCCGCC
CTTCACATCGAATGGAACAGCGTCGAATCGGGCTCGCGCGCGGACGGTTC
CGAAACGGCGGCCTCGACCGACGAAAACACTACCGACGGGGGGGGTGCCG
ACGGGTCGGAGTCAGCGTCTCAGCACTCAGGACACATGCGCCACCAATCC
CGCGGGGAGGGCGGATCGAGCAACACCGTCCACGTGCAGTTCGAGGGTGA
ACAGAATGGAACAGCGTCGAATCGGGCTCGCGCGCGGACGGTTCCGAAAC
GGCGGCCTCGACCGACGAAAACACTACCGACGGGGGGGGTGCCGACGGGT
CGGAGTCAGCGTCTCAGCACTCAGGACACATGCGCCACCAATCCCGCGGG
GAGGGCGGATCGAGCAACACCGTCCACGTGCAGTTCGAGGGTGAACAGAG
CCGCGTGTCCGCAGTGAACGAGGCCATGATCAGAAAGACATTCACACAGT
GGGAGCCCCTCGTCGACGTCGTCATTCCCGCTAGCCGGTACAACGGGGTG
TCGCCCGGACCGCGCCAGAGCCGCGTGTCCGCAGTGAACGAGGCCATGAT
CAGAAAGACATTCACACAGTGGGAGCCCCTCGTCGACGTCGTCATTCCCG
CTAGCCGGTACAACGGGGTGTCGCCCGGACCGCGCCAGCTTCCCCGATGT
TGGGGTTTCGTACACTTCCCGCCGACCCCGGACGGGGAGCACGCGGCAAA
AGACGCCATGCAGGCTCTCAACGGGACCACGATCGCAGAGATGAAGCTTC
CCCGATGTTGGGGTTTCGTACACTTCCCGCCGACCCCGGACGGGGAGCAC
GCGGCAAAAGACGCCATGCAGGCTCTCAACGGGACCACGATCGCAGAGAT
GAAGGTGCACTGCACCATGAACCGCACCAGCGGCGGAAGTGGCAACACCT
GGAGGAGGCAGGGCGGTATGGGCATCGCCGAGCGCGGGGGCAAGTCCCGA
AGGCACAGCAGCGGCGGGGCGGACGATGGCCGAGCGATGATGCACGGGCA
GGGCTTCGGCGGGAGGCCCGCGAGGTCCTCGATGGAGTCGCCGGGGGCGC
GAGGCGGAGGCGGCGGCGGGTGGGGCGGAAACGTGGTGCACTGCACCATG
AACCGCACCAGCGGCGGAAGTGGCAACACCTGGAGGAGGCAGGGCGGTAT
GGGCATCGCCGAGCGCGGGGGCAAGTCCCGAAGGCACAGCAGCGGCGGGG
CGGACGATGGCCGAGCGATGATGCACGGGCAGGGCTTCGGCGGGAGGCCC
GCGAGGTCCTCGATGGAGTCGCCGGGGGCGCGAGGCGGAGGCGGCGGCGG
GTGGGGCGGAAACGTG
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