mRNA_S-dermatodea_contig1030.228.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig1030.228.1 vs. uniprot
Match: A0A6H5LAT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAT6_9PHAE) HSP 1 Score: 341 bits (875), Expect = 2.700e-105 Identity = 186/311 (59.81%), Postives = 221/311 (71.06%), Query Frame = -1
Query: 2228 ITTASLPIPTTPRLSTAKHARWASGASGPVFSSPRNPSLEVMDTLFPRSCD--AERPSEEKVEGGEV-----ASYGQRLQAGRAAQGFVTDDGLAVMNAAPPQELTYGEYDLDFFFSLVDECLRIRAGGDGKGR---GALESEARNLVFGDIGSGCGRLVLAQALTLPWRLCRGVEKVPSLHDMAVAALHHAGQAT--EDTTASPEALHLLKTMAPCTMSLGDVNDEVDISNMDVLFCYSSSFPGYGDLLTELSYTLGHKLRPG-EVITTDRRLVSDGPWEFSLLGEREGPNSETGGKSTAYLWEVVKSAL 3121
++T S P T+ + H + SG S + S+ + RSCD A + E G + SY +R++ GR AQGF+T D LA PP+ELTYGEYDLDFF SLV ECL +RAG GK GALE+EAR+L+FGDIGSGCGRLV+AQALT PW+ CRGVE VPSLHDM AAL A + E+ SPE LL++MAPC++SLGDVND+VDIS++DVLFCYSSSFP +GDLLTE SYTLGHKLRPG +VITTDRRLVSDGPWEF+LLGEREG NSETGGKS AY+WEVV+SAL
Sbjct: 1 MSTPSAPTRTSHH--SRSHRHFESGCSS-------SRSILAHPSTTTRSCDPPAAALANEDGRAGVLDILFGGSYQERIEIGRDAQGFLTTDALAARTLVPPRELTYGEYDLDFFLSLVAECLNLRAGNSGKDDSSVGALEAEARSLIFGDIGSGCGRLVVAQALTWPWKSCRGVEIVPSLHDMGQAALQEADRLAKGEENALSPETSRLLRSMAPCSLSLGDVNDDVDISDIDVLFCYSSSFPAFGDLLTEFSYTLGHKLRPGAQVITTDRRLVSDGPWEFALLGEREGRNSETGGKSIAYIWEVVRSAL 302
BLAST of mRNA_S-dermatodea_contig1030.228.1 vs. uniprot
Match: D7G833_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G833_ECTSI) HSP 1 Score: 263 bits (671), Expect = 2.020e-73 Identity = 215/519 (41.43%), Postives = 275/519 (52.99%), Query Frame = 1
Query: 271 MGAS--PQHRKKRKRTQRANAAFT---GSRVKAESPRVS--LPIFATLFALAMMGAGCARTLVKASSKKSAEE-RDARAQD--LNAPWAVLFREQHEICPQAALFAHPVGRCLLAS-SADN-TLERLGPFTCLADARFFLRTLGVARSQSSFLLVDVGS----------PPARGMNL--------PETMELEARIRAGEDELPGEVRLVLVDPHED-LSVQGWSTLLLSLVQVMAAGGAIIIRG-RQAMGLDTNADEGPG-GLHDGSSGGSVDLRKAVDALACSDSGVAAAVGNFDGGIVVVRHAAADERPEER-GCRAGEGEGGEEG---------AAAQQPQLFEKLVLWATGEMG-----TVETVQANFGGADAVRNYARQRSGRAACLGKLINRDP------SEVTIDL-SQGDRPGRLRGK---VDHSATPDDTSA----RASRVCLENHLRQYPRDVRAAFALAMAFQSARGKGVDSKVARLRDKVCAESGEAGASLWRALHARAALDAATGL 1641
MG+S + R+KRKRT RA A+F G+ K E R + LP A +F L M C R K +++ A + R RA+D + P A+L QH+I QAA FA P G CL S AD T ERLG FTCLAD FFLR L + ++VDVGS PP G L PE +L+A++ AGED LP L+L+D H++ LS W L SL++ ++ G I+IRG R+ + T A G G + GS L AV ALAC AAAVGN DGGI+V+RHAA E E R G G++G AA P FE+L LW+T +E VQA FGGA+ VR YAR+R R+ CL L SE +++ S G G LR + + H + P +A A+R CLE HL ++P+DVRA FAL M ++ G GVD +V RLR ++ ESG AG LWRALHARAA AATGL
Sbjct: 1 MGSSLLSEPRRKRKRTARATASFRLNYGTAGKNEGTRCARCLPWIAGMFGLTMAVVVCVRNGFKDLAREKARDARLGRAEDHAKSHPLALLLEGQHDIGSQAARFADPDGHCLYPSPGADQPTAERLGVFTCLADTPFFLRALAESLRFRFLVVVDVGSVSLRHGLPASPPGLGAALTGLESEMFPEAPQLQAQVTAGEDPLPDNADLILIDVHKEVLSADDWVDLFRSLMRALSDDGVIVIRGPREQVDATTGAGRNEGAGSTIRAWYGSGHLWDAVTALACDQVAAAAAVGNLDGGIIVLRHAAPGEIDLETVKARCGRNHPGQQGGGVAKGAVAAAPPHPLRFERLFLWSTAPSDITTATAIEAVQAMFGGANEVRKYARRRYDRSVCLNTLNTVATGEAVAWSEASLETESMGG--GHLRAEPRHIRHKSVPQSGAAPQWHSAARACLETHLEEHPQDVRAGFALEMVLRATGGSGVDRQVDRLRTRMTEESGPAGGLLWRALHARAAGVAATGL 517
BLAST of mRNA_S-dermatodea_contig1030.228.1 vs. uniprot
Match: D7G834_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G834_ECTSI) HSP 1 Score: 148 bits (374), Expect = 1.450e-38 Identity = 70/85 (82.35%), Postives = 79/85 (92.94%), Query Frame = -1
Query: 2228 EVDISNMDVLFCYSSSFPGYGDLLTELSYTLGHKLRPG-EVITTDRRLVSDGPWEFSLLGEREGPNSETGGKSTAYLWEVVKSAL 2479
+V IS++DVLFCYSSSFP +GDLLTE SYTLGHKL+PG +VITTDRRLVSDGPWEF+LLGEREG NSETGGKS AY+WEVV+SAL
Sbjct: 3 QVGISDIDVLFCYSSSFPAFGDLLTEFSYTLGHKLQPGAQVITTDRRLVSDGPWEFALLGEREGRNSETGGKSIAYIWEVVRSAL 87
BLAST of mRNA_S-dermatodea_contig1030.228.1 vs. uniprot
Match: D7FPV7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPV7_ECTSI) HSP 1 Score: 129 bits (324), Expect = 2.660e-31 Identity = 66/112 (58.93%), Postives = 80/112 (71.43%), Query Frame = -1
Query: 2474 FFFSLVDECLRIRAGGDGKGRGALESEARNLVFGDIGSGCGRLVLAQALTLPWRLCRGVEKVPSLHDMAVAALHHAGQAT--EDTTASPEALHLLKTMAPCTMSLGDVNDEV 2803
FF ++G D GALE+EAR+LVFGDIGSGCGRLV+AQALT PW+ CRGVE VPSLHDM AL A + ++ T SPE L LL++MAPC++SLGDVND+V
Sbjct: 9 FFLGARISLRAGKSGNDASSVGALEAEARSLVFGDIGSGCGRLVVAQALTWPWKSCRGVEIVPSLHDMGQVALQEADRVAKGDENTLSPETLRLLRSMAPCSLSLGDVNDDV 120
BLAST of mRNA_S-dermatodea_contig1030.228.1 vs. uniprot
Match: A0A7S2V145_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V145_9STRA) HSP 1 Score: 134 bits (337), Expect = 4.320e-30 Identity = 102/309 (33.01%), Postives = 146/309 (47.25%), Query Frame = -1
Query: 2228 LEVMDTLFPR--SCDAERPSEEKVEGGEVASYGQRLQAGRAAQGFVTDDGLAVMNAAP---PQELTYGEYDLDFFFSLVDECLRIRAGGDGKGRGALESEARN-LVFGDIGSGCGRLVLAQAL---------TLPWRLCR---GVEKVPSLHDMAVAALHHAGQATEDTTASPEALHLLKTMAPCTMSLGDVNDEVD------------------------------ISNMDVLFCYSSSFPGYGDLLTELSYTLGHKLRPGE-VITTDRRLVSDGPWEFSLLGEREGPNSETGGKSTAYLWEVVKSAL 3007
L V++ +FP+ S D P + + ++ S +R + GR AQG TD ELTYGE+D+ FF +LV++ L L S+ + F D+GSGCGRLVLA L +L L G+E VP LH + + + + E +A LK T+ GD+ + D +S V+FCYSS+ +GD L +LS+ LG + G +ITTD++LVSDGPW+F LL EGPN ETGG ST Y+W+V++S +
Sbjct: 93 LPVINNVFPKYGSSDNHGPGDGPLLLAKLPSSDERFEIGRNAQGLFTDPNNPFGKFDTFGLDSELTYGEFDVAFFVNLVNKAL-------------LYSKFQGPRCFLDVGSGCGRLVLAAQLCFGHVSNQNSLKAGLLNEFVGIEVVPGLHHVGLKCMQYYQHMHEQKNNCEKANTHLKNNN-ITLICGDIYESPDTVITSENHASFEFQKRQLDEPRAEVTMGSVLSRAGVIFCYSSALASFGDELGQLSFALGTTAQVGTLIITTDKKLVSDGPWKFQLLETVEGPNEETGGMSTGYIWKVLQSGV 387
BLAST of mRNA_S-dermatodea_contig1030.228.1 vs. uniprot
Match: A0A835Z2B1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2B1_9STRA) HSP 1 Score: 127 bits (319), Expect = 6.960e-30 Identity = 75/176 (42.61%), Postives = 100/176 (56.82%), Query Frame = -1
Query: 2228 IGSGCGRLVLAQALTLPWRLCRGVEKVPSLHDMAVAALHHAGQATEDTTASPEALHL----------LKTMAPCTMSLGDV------NDEVDIS-NMDVLFCYSSSFPGYGDLLTELSYTLGHKLRPGE-VITTDRRLVSD-GPWEFSLLGEREGPNSETGGKSTAYLWEVVKSAL 2698
+ +G +V+ QAL PW+ C GVE VP+LHD+A AAL A +A L+ +APC + LGD+ D + DV+FCY S++P GDLLT LS+ L LR G V+TTDRRL S+ G WEF+L REG N+ETGG S AY+WEV ++ +
Sbjct: 5 VRNGAFGIVIGQALRHPWKECAGVEIVPALHDIAAAALAEAQRAXXXXXXXXXXXXXXXXXXXXXXALRALAPCALHLGDILTPCRGTPPTDAAARADVVFCYCSTWPAAGDLLTGLSFALAAVLRKGALVVTTDRRLASEPGAWEFALRATREGVNAETGGASVAYIWEVTQNGV 180
BLAST of mRNA_S-dermatodea_contig1030.228.1 vs. uniprot
Match: A0A7S1HJW0_HEMAN (Histone-lysine N-methyltransferase, H3 lysine-79 specific (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HJW0_HEMAN) HSP 1 Score: 121 bits (304), Expect = 1.460e-26 Identity = 79/203 (38.92%), Postives = 107/203 (52.71%), Query Frame = -1
Query: 2234 ELTYGEYDLDFFFSLVDECLRIRAGGDGKGRGALESEARNLVFGDIGSGCGRLVLAQALTLPW-RLCRGVEKVPSLHDMAVAALHHAGQATEDTTASPEALHLLKTMAPCTMSLGDVNDEVDI-SNMDVLFCYSSSFPGYGDLLTELSYTLGHKLRPG-EVITTDRRLVSDGPWEFSLLGEREGPNSETGGKSTAYLWEVVKS 2833
E TYGE DL+ F ++ AL VF D GSGCGRLV+ A+ P + CRG+E LHD AV+AL A T L + + +G+ ++ + ++D++FCYS++F G +LT+LS LG ++ G VIT D+ LVSDGPWEF +G EG NSE G S YL+ VVKS
Sbjct: 119 EYTYGELDLELFEPMM----------------ALAEPKEGDVFCDFGSGCGRLVIYSAIAYPQLKECRGLEIQEVLHDAAVSALDEARSGKGTTEEEQRLLQGDRVR----LKVGNAYEDPGLLQDVDLMFCYSTAFDSVGPMLTQLSACLGRNMKVGARVITVDKMLVSDGPWEFEEMGMLEGRNSELG-SSVGYLYRVVKS 300
BLAST of mRNA_S-dermatodea_contig1030.228.1 vs. uniprot
Match: A0A7S0Q107_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q107_9EUKA) HSP 1 Score: 111 bits (278), Expect = 1.620e-24 Identity = 71/164 (43.29%), Postives = 87/164 (53.05%), Query Frame = -1
Query: 2243 FGDIGSGCGRLVLAQALTLP-WRLCRGVEKVPSLHDMAVAALHHAGQATEDTTASPEALHLLKTMAPCTMSLGDVNDEV------DISNMDVLFCYSSSFPGYGDLLTELSYTLGHKLRPGEVITTDRRLVSD--GPWEFSLLGEREGPNSETGGKSTAYLWEV 2707
F D+GSGCGRLV A A+ P C GVEKV LHD+A A + SP L PC GD + + ++ D +F YSS+FP GD LT+ S +ITTD+RL SD G WEF LL E +GPN+ETGG ST Y+WEV
Sbjct: 10 FVDVGSGCGRLVFAAAVLQPSLSRCVGVEKVAGLHDLACEA----------ASTSP----LPAGSPPCEFLCGDAFEFLGTPPPYSLAAPDCIFIYSSAFPSAGDTLTDASLAFSMLPAGTRIITTDKRLGSDEAGRWEFQLLKELDGPNAETGGTSTGYIWEV 159
BLAST of mRNA_S-dermatodea_contig1030.228.1 vs. uniprot
Match: A0A7S3SUZ4_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3SUZ4_EMIHU) HSP 1 Score: 114 bits (284), Expect = 2.140e-24 Identity = 93/237 (39.24%), Postives = 119/237 (50.21%), Query Frame = -1
Query: 2234 VASYGQRLQAGRAAQGFVTDDGLAVMNAAPPQ-ELTYGEYDLDFFFSLVDECLRIRAGGDGKGRGALESEARNLVFGDIGSGCGRLVLAQALTLPWRLCR--GVEKVPSLHDMAVAALHHAGQATEDTTASPEALHLLKTMAPCTMSLGDVNDEVDISNMDVLFCYSSSFPGYGDLLTELSYTLGHKLRPG-EVITTDRRLVSDGPW-EFSLLGEREGPNSETGGKSTAYLWEVVKS 2929
V SY R+ GR AQ + + ++A P LTYGE+DL FF +LVD L AG E E F D+GSGCGRLVLA + P L R GVE LH MAV A A D +AL ++ P + + V+FCYSS++ G LT+ S +G PG V+ TD+ L DG EF+L+ E EGPN ETGG S Y++EVV+S
Sbjct: 40 VDSYSDRMMVGRRAQLGESMVWRSTLSAEPDNGHLTYGEFDLAFFGALVDRALARPAG-------RREPET----FVDVGSGCGRLVLAASCVWP-ELARAAGVETCADLHMMAVRAQARASLPRCDFVHG-DALQAMREGGP-------------LDDATVVFCYSSAWASEGGALTDFSELVGCCCLPGCRVVVTDKWLECDGSCGEFALIDEVEGPNRETGG-SVGYIYEVVRS 249
BLAST of mRNA_S-dermatodea_contig1030.228.1 vs. uniprot
Match: A0A7R9UUL2_DIALT (Hypothetical protein (Fragment) n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9UUL2_DIALT) HSP 1 Score: 111 bits (277), Expect = 1.010e-22 Identity = 84/209 (40.19%), Postives = 105/209 (50.24%), Query Frame = -1
Query: 2240 TYGEYDLDFFFSLVDECLRIRAGGDGKGRGALESEARNLVFGDIGSGCGRLVLAQALT-LPWRLCRGVEKVPSLHDMAVAALHHAGQATEDTTASPEALHLLKT-MAPCTMSLGDVNDEV--------DISNMDVLFCYSSSFPGYGDLLTELSYTLGHKLRPGE-VITTDRRLVSD--GPWEFSLLGEREGPNSETGGKSTAYLWEVV 2827
TYGE+DLDFF SL+ + R RAG F D+GSGCGRLV A AL WR GVE + LH +A + L T P H + +APCT+ GD N+ + D +LF YS+ P G L ELS +LG L G VITTD+ LVSD GPW F+L + PN T ST Y++E+V
Sbjct: 107 TYGEFDLDFFCSLL-KAARPRAGE---------------TFCDLGSGCGRLVFAAALAGYEWREAVGVELLEDLHALATSTLR---------TLEPIVAHTDEVRLAPCTLLSGDGNELIPQLVRSQGDKPAPWILFAYSTCMPSVGPYLCELSASLGTTLPVGSRVITTDKLLVSDDHGPWRFALRATLDAPNFNTH-SSTGYVFELV 289 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1030.228.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig1030.228.1 >prot_S-dermatodea_contig1030.228.1 ID=prot_S-dermatodea_contig1030.228.1|Name=mRNA_S-dermatodea_contig1030.228.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=460bp MGASPQHRKKRKRTQRANAAFTGSRVKAESPRVSLPIFATLFALAMMGAGback to top mRNA from alignment at S-dermatodea_contig1030:10393..17371- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig1030.228.1 ID=mRNA_S-dermatodea_contig1030.228.1|Name=mRNA_S-dermatodea_contig1030.228.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=6979bp|location=Sequence derived from alignment at S-dermatodea_contig1030:10393..17371- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig1030:10393..17371- >mRNA_S-dermatodea_contig1030.228.1 ID=mRNA_S-dermatodea_contig1030.228.1|Name=mRNA_S-dermatodea_contig1030.228.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2760bp|location=Sequence derived from alignment at S-dermatodea_contig1030:10393..17371- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |