prot_S-latissima_F_contig1035.325.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig1035.325.1
Unique Nameprot_S-latissima_F_contig1035.325.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length114
Homology
BLAST of mRNA_S-latissima_F_contig1035.325.1 vs. uniprot
Match: D8LQI0_ECTSI (JmjC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQI0_ECTSI)

HSP 1 Score: 213 bits (542), Expect = 6.940e-66
Identity = 97/111 (87.39%), Postives = 103/111 (92.79%), Query Frame = 0
Query:    1 LELPQARPELGALLAAPQELLGADEFQLFPPSVRPQNLCAIVGGVGARSFLHSDPMEWMGWNVLLEGRKLWTFLPPSPELDAPLGTYRLAPNAFGSHNISAGWQSNVDLYK 111
            L+ PQARPELGALL  PQ+LLG DEFQLFPPSVRPQNLC IVGGVGARSFLHSDPMEWMGWNVLLEGRKLWTFLPP  +LD+ LGTYRLAPNAFGSHN+SAGWQSNVDLY+
Sbjct:  178 LDFPQARPELGALLEKPQDLLGTDEFQLFPPSVRPQNLCTIVGGVGARSFLHSDPMEWMGWNVLLEGRKLWTFLPPLADLDSSLGTYRLAPNAFGSHNVSAGWQSNVDLYQ 288          
BLAST of mRNA_S-latissima_F_contig1035.325.1 vs. uniprot
Match: A0A7S2R9P6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R9P6_9STRA)

HSP 1 Score: 123 bits (308), Expect = 6.200e-31
Identity = 55/105 (52.38%), Postives = 70/105 (66.67%), Query Frame = 0
Query:    8 PELGALLAAPQELLGADEFQLFPPSVRPQNLCAIVGGVGARSFLHSDPMEWMGWNVLLEGRKLWTFLPPSPELDAPLGTYRLAPNAF--GSHNISAGWQSNVDLY 110
            P L + L  P+   G D F LFP  ++P+  C ++GG G+RS LH+DPMEW GWN LLEG KLWTFLPP    +  LG+ R+    +  G +NISAGWQS+VDLY
Sbjct:  179 PSLASSLTLPEAWFGKDHFGLFPAELQPKQPCLVMGGAGSRSSLHADPMEWTGWNYLLEGSKLWTFLPPGKGTETALGSRRVLSGEWDGGKYNISAGWQSDVDLY 283          
BLAST of mRNA_S-latissima_F_contig1035.325.1 vs. uniprot
Match: A0A8J5Y022_DIALT (JmjC domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5Y022_DIALT)

HSP 1 Score: 119 bits (298), Expect = 3.260e-30
Identity = 64/112 (57.14%), Postives = 73/112 (65.18%), Query Frame = 0
Query:    8 PELGALLAAPQELLGADEFQL-FPPSVRPQNLCAIVGGVGARSFLHSDPMEWMGWNVLLEGRKLWTFLPPSPELDAPLGTYRLAPNAFGSHN--ISAGWQSNVDLY--KRAG 114
            P+L   LA    L   D F+  FPP +RP   C IVGG GARS LH+DP EW+G NV LEGRKLW FLPP PEL A L  YRL   A+GS    +SAGWQS+ DLY  +RAG
Sbjct:   80 PQLERELALRPGLFEPDWFEAHFPPELRPSRTCVIVGGEGARSTLHADPFEWVGTNVCLEGRKLWRFLPPEPELSAQLRGYRLPSIAWGSQGGALSAGWQSDFDLYATRRAG 191          
BLAST of mRNA_S-latissima_F_contig1035.325.1 vs. uniprot
Match: W7TWL4_9STRA (F-box protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TWL4_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 1.860e-22
Identity = 52/96 (54.17%), Postives = 61/96 (63.54%), Query Frame = 0
Query:   17 PQELLGA-DEFQLFPPSVRPQNLCAIVGGVGARSFLHSDPMEWMGWNVLLEGRKLWTFLPPSPELDAPLGTYRLAPNAFGSHNISAGWQS-NVDLY 110
            P  L G  D F LFP  +RP+  C I+GG GARSFLH DP EW G N LLEGRK+WTF PP     A LG  R+ P A+    +SAGW+S + DLY
Sbjct:  149 PPSLFGKLDYFDLFPQRIRPKKHCLILGGTGARSFLHVDPFEWTGVNYLLEGRKIWTFFPPC---SADLGLKRVLPEAWEGE-VSAGWKSTDFDLY 240          
BLAST of mRNA_S-latissima_F_contig1035.325.1 vs. uniprot
Match: A0A812XB14_9DINO (PSR protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812XB14_9DINO)

HSP 1 Score: 92.0 bits (227), Expect = 2.210e-19
Identity = 48/106 (45.28%), Postives = 59/106 (55.66%), Query Frame = 0
Query:   12 ALLAAPQELLGADEFQLFPPSVRPQNLCAIVGGVGARSFLHSDPMEWMGWNVLLEGRKLWTFLPPSPELDAPLGTYRLAPNAFGSHN-------ISAGWQSNVDLY 110
            +LL A    L  D F  FP  +RP  LC +VGG GARS LH DP+ W GWN LL+GRKLW F P  P+       +R A   FG          I +GW+S+VDL+
Sbjct:  101 SLLEAAPPFLREDLFCEFPLMLRPAQLCLVVGGQGARSDLHIDPLSWTGWNCLLQGRKLWRFFPDIPQ---HAEAFRPASRPFGIRKGGAEVCTIGSGWRSDVDLF 203          
BLAST of mRNA_S-latissima_F_contig1035.325.1 vs. uniprot
Match: A0A1Q9EEB4_SYMMI (Bifunctional arginine demethylase and lysyl-hydroxylase PSR n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9EEB4_SYMMI)

HSP 1 Score: 92.0 bits (227), Expect = 2.280e-19
Identity = 48/106 (45.28%), Postives = 59/106 (55.66%), Query Frame = 0
Query:   12 ALLAAPQELLGADEFQLFPPSVRPQNLCAIVGGVGARSFLHSDPMEWMGWNVLLEGRKLWTFLPPSPELDAPLGTYRLAPNAFGSHN-------ISAGWQSNVDLY 110
            +LL A    L  D F  FP  +RP  LC +VGG GARS LH DP+ W GWN LL+GRKLW F P  P+       +R A   FG          I +GW+S+VDL+
Sbjct:  101 SLLEAAPPFLREDLFCEFPLMLRPAQLCLVVGGQGARSDLHIDPLSWTGWNCLLQGRKLWRFFPDIPQ---HAEAFRPASRPFGIRKGGAEVCTIGSGWRSDVDLF 203          
BLAST of mRNA_S-latissima_F_contig1035.325.1 vs. uniprot
Match: A0A812KFH2_9DINO (PSR protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812KFH2_9DINO)

HSP 1 Score: 89.4 bits (220), Expect = 5.470e-19
Identity = 47/106 (44.34%), Postives = 58/106 (54.72%), Query Frame = 0
Query:   12 ALLAAPQELLGADEFQLFPPSVRPQNLCAIVGGVGARSFLHSDPMEWMGWNVLLEGRKLWTFLPPSPELDAPLGTYRLAPNAFGSHN-------ISAGWQSNVDLY 110
            +LL A    L  D F  FP  +RP  LC +VGG GARS LH DP+ W GWN LL+GRKLW F P  P+       +R     FG          I +GW+S+VDL+
Sbjct:  101 SLLEAAPPFLREDLFCEFPRMLRPAPLCLVVGGRGARSDLHIDPLSWTGWNCLLQGRKLWRFFPDIPQ---NAEAFRPMSRPFGIRKGGAEVCTIGSGWRSDVDLF 203          
BLAST of mRNA_S-latissima_F_contig1035.325.1 vs. uniprot
Match: A0A835YWS3_9STRA (JmjC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWS3_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 2.060e-10
Identity = 32/48 (66.67%), Postives = 37/48 (77.08%), Query Frame = 0
Query:   65 LEGRKLWTFLPPSPELDAPLGTYRLAPNAFG-SHNISAGWQSNVDLYK 111
            +EG KLWTFLPP PE    L  YRL PNA+G S+N+SAGWQS VDLY+
Sbjct:    1 MEGEKLWTFLPPCPE--HLLDGYRLPPNAWGGSYNVSAGWQSPVDLYR 46          
BLAST of mRNA_S-latissima_F_contig1035.325.1 vs. uniprot
Match: A0A7S0ZU07_NOCSC (Hypothetical protein (Fragment) n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S0ZU07_NOCSC)

HSP 1 Score: 55.5 bits (132), Expect = 6.490e-7
Identity = 22/52 (42.31%), Postives = 28/52 (53.85%), Query Frame = 0
Query:   31 PSVRPQNLCAIVGGVGARSFLHSDPMEWMGWNVLLEGRKLWTFLPPSPELDA 82
            PS      C ++GG GA S LH DP+ W GWN L+ G   W   PPS  + +
Sbjct:   58 PSCLQCQTCMVIGGKGATSKLHRDPLTWFGWNFLVLGTTRWALFPPSTPISS 109          
BLAST of mRNA_S-latissima_F_contig1035.325.1 vs. uniprot
Match: A0A7S1S9K8_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1S9K8_ALECA)

HSP 1 Score: 49.7 bits (117), Expect = 7.130e-5
Identity = 19/42 (45.24%), Postives = 27/42 (64.29%), Query Frame = 0
Query:   37 NLCAIVGGVGARSFLHSDPMEWMGWNVLLEGRKLWTFLPPSP 78
            ++  I GG G RS  H+D ++W+GWN LL G KLW +   +P
Sbjct:  139 SMALIRGGKGTRSEFHADHLDWIGWNFLLRGEKLWRWWKRTP 180          
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig1035.325.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D8LQI0_ECTSI6.940e-6687.39JmjC domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A7S2R9P6_9STRA6.200e-3152.38Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A8J5Y022_DIALT3.260e-3057.14JmjC domain-containing protein n=2 Tax=Diacronema ... [more]
W7TWL4_9STRA1.860e-2254.17F-box protein n=1 Tax=Nannochloropsis gaditana Tax... [more]
A0A812XB14_9DINO2.210e-1945.28PSR protein n=2 Tax=Symbiodinium TaxID=2949 RepID=... [more]
A0A1Q9EEB4_SYMMI2.280e-1945.28Bifunctional arginine demethylase and lysyl-hydrox... [more]
A0A812KFH2_9DINO5.470e-1944.34PSR protein n=2 Tax=Symbiodinium TaxID=2949 RepID=... [more]
A0A835YWS3_9STRA2.060e-1066.67JmjC domain-containing protein n=1 Tax=Tribonema m... [more]
A0A7S0ZU07_NOCSC6.490e-742.31Hypothetical protein (Fragment) n=1 Tax=Noctiluca ... [more]
A0A7S1S9K8_ALECA7.130e-545.24Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Saccharina latissima female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.120.650coord: 2..108
e-value: 7.5E-11
score: 43.8
NoneNo IPR availableSUPERFAMILY51197Clavaminate synthase-likecoord: 4..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig1035contigS-latissima_F_contig1035:151739..153854 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig1035.325.1mRNA_S-latissima_F_contig1035.325.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig1035 151739..153855 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig1035.325.1 ID=prot_S-latissima_F_contig1035.325.1|Name=mRNA_S-latissima_F_contig1035.325.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=114bp
LELPQARPELGALLAAPQELLGADEFQLFPPSVRPQNLCAIVGGVGARSF
LHSDPMEWMGWNVLLEGRKLWTFLPPSPELDAPLGTYRLAPNAFGSHNIS
AGWQSNVDLYKRAG
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