mRNA_S-latissima_F_contig1030.285.1 (mRNA) Saccharina latissima SLPER63f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-latissima_F_contig1030.285.1
Unique NamemRNA_S-latissima_F_contig1030.285.1
TypemRNA
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Homology
BLAST of mRNA_S-latissima_F_contig1030.285.1 vs. uniprot
Match: A0A6H5L7P6_9PHAE (Rhodanese domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7P6_9PHAE)

HSP 1 Score: 435 bits (1119), Expect = 1.060e-141
Identity = 262/485 (54.02%), Postives = 306/485 (63.09%), Query Frame = 3
Query:  495 AALSAPRALLGLWCLSLQTS----------CGFLVPTPQGDVCAASHTRLRRVPPPLPATSPVASTPAVIPPASGIE------AGDGGGE------------GINGVAPRAERLSSTDFGKFVKRRQDGLGRVVVDLRPSSDFHREHFVGATSIPAGELESRLLELPPPFAEPLNIVGNEEDLRKSSDFLTSKGWRIGAEI---VADMVTGGR---AEWPTEAGSRSVQVWRANDFLEFCMEHFLLPSTLGETGAAEG-AIVLDLGCGSGRDTVHMAQHLPPGTRVIGVDNHSYALERGERLAEQWVDAADGGGTVGASSHDGSESDGG----------------SARGEPSDKHG--SLNRG-----RARRCEWLLADLRKEGSLDGLKASVIHGHRFKCEQLLPLLRDDVLLPGGFFVWSTFLDTGTENLVPPWRPSRMMRRGELADIFSGHGFEILVDEQGELSTRGSVVSANFFACRKRPS 1775
            AA SAP  L   WCLSL             CGFLVP+    + +   + + R PPP  ATS      A    A          AG   GE            G  G +P      S +F ++V RR+ G  RVV+DLRP +DF REH  G+TSIP  ELE RLLELPPPFA+P+NIVG++++LR + DFLT+KGW+I  EI   VA  V         WPTE GS S+QVWRANDFLEFCM+ F+LPS   + G   G  +VLDLGCGSGRDTV+MAQ LPPGTRV+GVDNHSYALERG RLAE+W++    G  VG S + G   +G                 S  G  SD  G     +G     R R CEW L DLRKEGSLD ++AS++HGHRFKCE+LLPLLRD VLLPGG+F+WSTFLDTG+ENLVPPWRPSRMMR GELADIFSG GFEILVDEQGEL TRGS V ANFF CRK P+
Sbjct:    3 AARSAPTLLH--WCLSLLLQLLLQMQMGMVCGFLVPSQPRGMPSIEKSNIIR-PPPTAATSYTTVAAASRAGAGATSFTMASVAGTAVGESTTSQTRTVPSVGAAGASPDPFAKPS-EFQEYVGRRKSGSRRVVLDLRPRADFRREHLEGSTSIPIDELEPRLLELPPPFAQPVNIVGSQQELRMARDFLTNKGWQIDEEIDLSVAACVNNPAHPTEAWPTETGSTSLQVWRANDFLEFCMDRFVLPSA-HDAGPFPGKGLVLDLGCGSGRDTVYMAQRLPPGTRVVGVDNHSYALERGARLAERWLEDTSSGKVVGGSGNGGGSEEGATRSQRETQTGCLGGVRSRAGGRSDTDGREGTTQGQPPEVRQRACEWSLTDLRKEGSLDAMRASIVHGHRFKCERLLPLLRDHVLLPGGYFIWSTFLDTGSENLVPPWRPSRMMRPGELADIFSGDGFEILVDEQGELPTRGSTVPANFFICRKLPT 482          
BLAST of mRNA_S-latissima_F_contig1030.285.1 vs. uniprot
Match: D7FQG6_ECTSI (Tellurite resistance methyltransferase, TehB, core n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQG6_ECTSI)

HSP 1 Score: 435 bits (1118), Expect = 1.600e-141
Identity = 230/390 (58.97%), Postives = 270/390 (69.23%), Query Frame = 3
Query:  717 GINGVAPRAERLSSTDFGKFVKRRQDGLGRVVVDLRPSSDFHREHFVGATSIPAGELESRLLELPPPFAEPLNIVGNEEDLRKSSDFLTSKGWRIGAEIVADMVTGGR------AEWPTEAGSRSVQVWRANDFLEFCMEHFLLPSTLGETGAAEGAIVLDLGCGSGRDTVHMAQHLPPGTRVIGVDNHSYALERGERLAEQWVDAADGG---------------------------------GTVGASSHDGSESDGGSARGEPSDKHGSLNRGRARRCEWLLADLRKEGSLDGLKASVIHGHRFKCEQLLPLLRDDVLLPGGFFVWSTFLDTGTENLVPPWRPSRMMRRGELADIFSGHGFEILVDEQGELSTRGSVVSANFFACRKR 1769
            G  G +P      S +F +FV RR+ G  RVV+DLRP +DF REH  G+TSIP  ELE RLLELPPPFA+P+NIVG++++LR + DFLT+KGW+I  E+   +    +        WPTE GS S+QVWRANDFLEFCM+ F+LPS    +      +VLDLGCGSGRDTV+MAQ LPPGTRV+GVDNHSYALERG RLAE+W++    G                                 G VG S  DGSE   G+ +G P +        R R CEW LADLRKEGSLDG++AS++HGHRFKCE+LLPLLRD VLLPGG+F+WSTFLDTG+ENLVPPWRPSRMMR GELADIFSG GFEILVDEQGEL TRGS V ANFFACRKR
Sbjct:  103 GAAGASPDPFATRS-EFQEFVGRRKSGSRRVVLDLRPRADFRREHLEGSTSIPVDELEPRLLELPPPFAQPVNIVGSQQELRTARDFLTNKGWQIEEEVDLSVAACTKDPAHPTEAWPTETGSTSLQVWRANDFLEFCMDRFVLPSGHDASPFPGKGLVLDLGCGSGRDTVYMAQRLPPGTRVVGVDNHSYALERGARLAERWLEDTSSGEVAGGXXXXXXXEQGATRSQQETQTGCLGGVTSGAVGRSDTDGSE---GATKGNPPEV-------RQRACEWSLADLRKEGSLDGMRASIVHGHRFKCERLLPLLRDHVLLPGGYFIWSTFLDTGSENLVPPWRPSRMMRPGELADIFSGDGFEILVDEQGELPTRGSTVPANFFACRKR 481          
BLAST of mRNA_S-latissima_F_contig1030.285.1 vs. uniprot
Match: A0A835YXG6_9STRA (Rhodanese domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXG6_9STRA)

HSP 1 Score: 228 bits (580), Expect = 6.390e-63
Identity = 139/326 (42.64%), Postives = 177/326 (54.29%), Query Frame = 3
Query:  807 VVVDLRPSSDFHREHFVGATSIPAGELESRLLELPPPFAEPLNIVGNEEDLRKSSDFLTSKGWRIGAEIVADMVTG-GRAEWPTEAGSRSVQVWRANDFLEFCMEHFLLPSTLGETGAAEGAIVLDLGCGSGRDTVHMAQHLPPGTRVIGVDNHSYALERGERLAEQWVDAADGGGTVGASSHDGSESDGGSARGEPSDKHGSLNRGRARRCEWLLADLRKE--GSLDGLKASVIHGHRFKCEQLLPLLRDDVLLPGGFFVWSTFLDTGTE-NLVPPWRPSRMMRRGELADIFSGHG--FEILVDEQGELSTRGSVVSANFFACRK 1766
             V+DLRPS  + + H  G++S+P  EL  RL ELP PF  P+ +VGN     ++   L + GW IG E   D+  G G A    + G  S QVWR NDFL+F +  ++LP  +   G     + LDLGCG+GRD V +AQ LPPG RV+GVDNH  AL+R   LA +W             S DG                         RC WL  DLRK    SLD L A +IHGHRF  + L+   RD + + GGFFVW TF+  G E NL PP +PSRM+  GEL  IFS     +++L DE GEL+TRG  V ANFF  ++
Sbjct:  173 TVLDLRPSEHYAQGHVPGSSSLPLSELGPRLYELPAPFGPPVGLVGNNAQREEARGVLEAGGWTIGEET--DVEGGQGMAGVELQVGGESPQVWRPNDFLDFALHKYVLPDIVH--GDRRTGLALDLGCGNGRDAVFLAQKLPPGWRVVGVDNHKGALQRCAELASRW-------------SRDG-------------------------RCFWLCRDLRKNTASSLDDLPADIIHGHRFMDKPLMAAARDRLPV-GGFFVWGTFMQLGEEQNLAPPHKPSRMVAHGELHRIFSSGSATYKVLHDEAGELNTRGVPVPANFFVAQR 455          
BLAST of mRNA_S-latissima_F_contig1030.285.1 vs. uniprot
Match: A0A7S1J5A0_9EUGL (Hypothetical protein (Fragment) n=2 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1J5A0_9EUGL)

HSP 1 Score: 182 bits (462), Expect = 2.140e-46
Identity = 117/310 (37.74%), Postives = 160/310 (51.61%), Query Frame = 3
Query:  804 RVVVDLRPSSDFHREHFVGATSIPAGELESRLLELPPPFAEP-LNIVGNEEDLRKSSDFLTSKGWRIGAEIVADMVTGGRAEWPTE--AGSRSVQVWRANDFLEFCMEHFLLPSTLGETGAAEGAIVLDLGCGSGRDTVHMAQHLPPGTRVIGVDNHSYALERGERLAEQWVDAADGGGTVGASSHDGSESDGGSARGEPSDKHGSLNRGRARRCEWLLADLRKEGSLDGLKASV--IHGHRFKCEQLLPLLRDDVLLPGGFFVWSTFLDTGTENLVPPWRPSRMMRRGELADIFSGHGFEILVDEQGEL 1718
            +V++DLR +++F   H  G+TSIP  EL  RL ELPPP+A+  + +VG  + L+ + + L SKGW +   +      G   +W  E   G+ SV +WR ++FLE  ++  L    LG   A   A+  DLGCGSGRD V++AQ LP   +V GVDNH  AL R E LA++           G   H                               L  DLRK GS+      +  +HG RF    LL  +RD +L  GG F+WSTF++ G ENL PP++PSR +  GEL   F   G+ IL DE+GEL
Sbjct:  202 KVIIDLRSNAEFQTGHLKGSTSIPLEELFPRLFELPPPYAKCCMTLVGPRDGLQVAQELLESKGWAVEDAMTLQQALG---QWGAELETGAYSVPIWRPSEFLEEVLDICLENMDLGSEAAYTTAV--DLGCGSGRDLVYLAQRLPSHWKVYGVDNHGNALIRSEALAQR----------AGVQVH------------------------------TLNCDLRKPGSMQEFYGCIALVHGARFLDRGLLLEVRDHLLADGGIFIWSTFME-GEENLAPPFKPSRRLLPGELRQTFQSAGYTILWDEEGEL 465          
BLAST of mRNA_S-latissima_F_contig1030.285.1 vs. uniprot
Match: A0A7S2ZA17_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZA17_9RHOD)

HSP 1 Score: 172 bits (437), Expect = 3.300e-45
Identity = 121/318 (38.05%), Postives = 161/318 (50.63%), Query Frame = 3
Query:  861 ATSIPAGELESRLLELPPPFAEPLNIVGNEED-LRKSSDFLTSKGWRIGA-----EIVADMVTGGRAEWPTEAGSRSVQVWRANDFLEFCMEHFLLPSTLGETGAAEGAIVLDLGCGSGRDTVHMAQHLPPGTRVIGVDNHSYALERGERLAEQWVDAADGGGTVGASSHDGSESDGGSARGEPSDKHGSLNRGRARRC----EWLLADLRKEGSLDGLKASVIHGHRFKCEQLLPLLRDDVLLPGGFFVWSTFLDTGTENLVPPWRPSRMMRRGELADIFSGHGFEILVDEQGELSTRGSVVSANFFACRKRPSVQP 1784
            +TSIPA EL+ RLLE+PPP  +PL ++G  ED +  + + L  KGW + A     ++  D+V+             SVQ WR NDFLE  +E       L +   AEG + +D GCGSGRD V++AQ L  G RVIGVDNHS AL RGE LA                                            RRC    E++  DLRK+ +L+   A ++HG RF    LL   + +VL   G F+WSTF D G EN  PP+R SR + +GEL  +F     E +   +G L+TR   V A FFA RK+P+ +P
Sbjct:    3 STSIPADELQERLLEMPPPVEDPLTLLGESEDHISAAQELLVGKGWELSAVFREVDVRDDLVS----------TDPSVQCWRPNDFLECVIE------VLKDRLPAEG-VAIDYGCGSGRDVVYLAQMLK-GWRVIGVDNHSNALARGEGLA--------------------------------------------RRCGVDVEFVCQDLRKDPNLN-TTADLVHGCRFLSRPLLDYCKHEVLKDDGLFIWSTFAD-GVENPAPPYRTSRRLAQGELKRMFPDEELEEIHYSRGTLTTRQKPVPAEFFAGRKKPARKP 256          
BLAST of mRNA_S-latissima_F_contig1030.285.1 vs. uniprot
Match: R1EYM2_EMIHU (Rhodanese domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1EYM2_EMIHU)

HSP 1 Score: 160 bits (405), Expect = 6.620e-40
Identity = 120/319 (37.62%), Postives = 153/319 (47.96%), Query Frame = 3
Query:  807 VVVDLRPSSDFHREHFVGATSIPAGELESRLLELPPPFAEPLNIVGNEEDLRKSSDFLTSKGWRIGAEIVADMVTGGRAEWP---TEAGSRSVQVWRANDFLEFCMEHFLLPSTLGETGAAEGAIVLDLGCGSGRDTVHMAQHLPPGTRVIGVDNHSYALERGERLAEQWVDAADGGGTVGASSHDGSESDGGSARGEPSDKHGSLNRGRARRCEWLLADLRKEGSLDGLKA--SVIHGHRFKCEQLLPLLRDDVLLPGGFFVWSTFLDTGTENLVPPWRPSRMMRRGELADIFS-GHGFEILVDEQGELSTRGSVVSA 1745
            VVVDLRP   F + H  G++S+P   L +RL ELPPP   PL +VG+  +L  +   L  KGW        D      A W    +E+G  S  + R N FL   +    LP    E GAA     +D+GCGSGRD V +AQ L      IGVDNH  ALER +RLA       DG G   A                                 + LA++RK+   D  +   S++HG RF    LL  L  +V+ PGG  VWSTFLD       PP+RPSR ++RGE+  +F    GFE+L  E+G L TRG   SA
Sbjct:   67 VVVDLRPREAFEQCHLSGSSSLPLTSLRARLFELPPPGEWPLTLVGSAAELETARALLLPKGWEFEERHADDS-----AFWEGAASESGPDSAPLLRPNAFLASALRQVDLP----EAGAA-----IDVGCGSGRDAVFLAQTLGDTWETIGVDNHKGALERAQRLA-------DGCGVSAA---------------------------------FALANVRKQSLSDLTERPISIVHGCRFLDRPLLRAL-PEVVAPGGLVVWSTFLDGDGPPQAPPFRPSRRLQRGEMEHLFGESRGFEVLRAEEGTLLTRGVWESA 330          
BLAST of mRNA_S-latissima_F_contig1030.285.1 vs. uniprot
Match: A0A8J5XW86_DIALT (Rhodanese domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XW86_DIALT)

HSP 1 Score: 159 bits (401), Expect = 5.730e-39
Identity = 131/363 (36.09%), Postives = 167/363 (46.01%), Query Frame = 3
Query:  801 GRVVVDLRPSSDFHREHFVGATSIPAGELESRLLELPPPFAEPLNIVGNEE-DLRKSSDFLTSKGWRIGAEIVADMVTGGRAEWPT--EAGSR--------SVQVWRANDFLEFCMEHFLLPSTLGETGAAE-----------------------GA-IVLDLGCGSGRDTVHMAQHLPPGTRVIGVDNHSYALERGERLAEQWVDAADGGGTVGASSHDGSESDGGSARGEPSDKHGSLNRGRARRCEWLLADLRKE----GSLDGLKASVIHGHRFKCEQLLPLLRDDVLL-PGGFFVWSTFL---DTGTENLVPPWRPSRMMRRGELADIF-SGHGFEILVDEQGELSTRGSVVSANFFA 1757
            G ++VD+R ++ F   H  GA+SIP  ELE+RL ELP P  + L + G +  ++R + + L ++GW + A + A        EW    +AG R        S   WR N FL       LLP  L    AAE                       GA I LDLG G+GRD V +A  L  G  V  VDNH  AL R   LA +                                       G + R      DLR+     G  DG +  + HG RF  + LL +LRDDVLL PG  FVWSTFL   D   EN  PP+RPSR +RRGELA +F +  G+ +L D++GEL TRG  V A FFA
Sbjct:   45 GGILVDVRAAAAFSARHLRGASSIPLAELEARLFELPAPSEDALALCGADATEVRAAYELLAARGWSVNATVDAS----DEGEWRACADAGWREAAAPDGASAPSWRPNLFLRR-----LLPDALAAARAAEELARCVADDAAAAAPGVAGGGVGGARIALDLGAGNGRDAVGLADALGEGWEVHAVDNHLGALARCAALAAR--------------------------------------AGVSARVRTDARDLRRAAPVVGWTDG-RVRLAHGSRFLVKPLLAMLRDDVLLEPGALFVWSTFLEPADGEDENRAPPFRPSRRLRRGELASLFCAARGWRVLADDEGELVTRGERVPAAFFA 359          
BLAST of mRNA_S-latissima_F_contig1030.285.1 vs. uniprot
Match: A0A5J4Z1S4_PORPP (Rhodanese domain-containing protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z1S4_PORPP)

HSP 1 Score: 157 bits (397), Expect = 1.260e-38
Identity = 115/339 (33.92%), Postives = 159/339 (46.90%), Query Frame = 3
Query:  804 RVVVDLRPSSDFHREHFVGATSIPAGELESRLLELPPPFAEPLNIVGNEEDLRKSSD---FLTSKGWRIGAE---IVADMVTGGRAEWPTEAGSRSVQVWRANDFLEFCMEHFLLPSTL----GETGAAEGAIVLDLGCGSGRDTVHMAQHLPPGTRVIGVDNHSYALERGERLAEQW-VDAADGGGTVGASSHDGSESDGGSARGEPSDKHGSLNRGRARRCEWLLADLRKEGSLDGL-KASVIHGHRFKCEQLLPLLRDDVLLPGGFFVWSTFLDTG--TENLVPPWRPSRMMRRGELADIF---SGH-GFEILVDEQGELSTRGSVVSANFFACRK 1766
            ++++D+R +  F R H   A S P  ELE R  ELPPP+  P  IV   E + +      FLT+KGW+       ++        + + TE G  +  VWR N+FLE       LP +      +    E  + LDLGCGSGRD V +  HLP   RV+G DNHSYALER + LA++  VD                                          E    DL  E     L KA ++HG RF    LL  +RD V+  GG F+WSTF+ +     N+ PP++  R++  GEL ++F   S H  +E++ +  G   TRG  V A FFACR+
Sbjct:   57 KLLLDVRDAVAFERCHVANAVSFPLRELEQRAFELPPPYT-PARIVICGESIAQVEHAVLFLTAKGWQCDVRECLLLGTDEASAFSRFKTETGRCTAVVWRPNEFLEQLFSSGPLPLSAYLRAEQQKLTEAPVALDLGCGSGRDLVFLKMHLPGRWRVMGFDNHSYALERAKALAQRASVDV-----------------------------------------EVCTVDLTDELQAARLPKAHLVHGCRFLHRPLLRHVRDHVIHVGGIFIWSTFVQSAESARNMAPPYKEKRVLAPGELREMFLVPSLHVQYELIEERDGVFLTRGVPVPATFFACRR 353          
BLAST of mRNA_S-latissima_F_contig1030.285.1 vs. uniprot
Match: A0A7S3E5W8_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3E5W8_9RHOD)

HSP 1 Score: 119 bits (297), Expect = 1.100e-26
Identity = 77/185 (41.62%), Postives = 101/185 (54.59%), Query Frame = 3
Query:  747 RLSSTDFGKFVKRRQDGLGRVVVDLRPSSDFHREHFVGATSIPAGELESRLLELPPPFAEPLNIVGNEED-LRKSSDFLTSKGWRIGA-----EIVADMVTGGRAEWPTEAGSRSVQVWRANDFLEFCMEHFLLPSTLGETGAAEGAIVLDLGCGSGRDTVHMAQHLPPGTRVIGVDNHSYALER 1283
            R S T+F      R     R ++D+R    F R H   +TSIPA EL+ RLLE+PPP  +PL ++G  ED +  + + L  KGW + A     ++  D+V+             SVQ WR NDFLE  +E       L +   AEG + +D GCGSGRD V++AQ L  G RVIGVDNHS AL R
Sbjct:   58 RFSRTEF------RPPRRPRNIIDIRTKESFARGHLPCSTSIPADELQERLLEMPPPVEDPLTLLGESEDHISAAQELLVGKGWELSAVFREVDVRDDLVS----------TDPSVQCWRPNDFLECVIE------VLKDRLPAEG-VAIDYGCGSGRDVVYLAQMLK-GWRVIGVDNHSNALAR 218          
BLAST of mRNA_S-latissima_F_contig1030.285.1 vs. uniprot
Match: A0A7S1UFD9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UFD9_9STRA)

HSP 1 Score: 110 bits (276), Expect = 1.530e-23
Identity = 82/220 (37.27%), Postives = 105/220 (47.73%), Query Frame = 3
Query: 1161 EGAIVLDLGCGSGRDTVHMAQHLPPGTRVIGVDNHSYALERGERLAEQWVDAADGGGTVGASSHDGSESDGGSARGEPSDKHGSLNRGRARRCEWLLADLRKEGSLDGLKASV--------IHGHRFKCEQLLPLLR-----DDVLLPGGFFVWSTFLDTGTEN----LVPPWRPSRMMRRGELADIFS----GHGFEILVDEQGELSTRGSVVSANFFA 1757
            + A+ LDLGCGSGRD   + Q L  G RV+ VDNH  AL+R  RL E  +   +G                                      E +  DLRK  +   LKA++        +HG RF C  LL  L      D  L  GG FVWSTF D G E     L PP++ SR +R+GEL + F+    G G+E+++DE+G L TRG  V ANFFA
Sbjct:   64 DAAVALDLGCGSGRDAAFLGQWLR-GWRVLAVDNHKGALDRSRRLGELVLGKGEG------------------------------------MLEVVDVDLRKADAPAALKAAIGGSGEAALVHGCRFLCADLLDELTGHGQGDCFLGVGGIFVWSTFAD-GEEKEGGPLAPPFKKSRRLRKGELRERFTQCGGGIGYEVVLDEEGTLVTRGEAVPANFFA 245          
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig1030.285.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L7P6_9PHAE1.060e-14154.02Rhodanese domain-containing protein n=1 Tax=Ectoca... [more]
D7FQG6_ECTSI1.600e-14158.97Tellurite resistance methyltransferase, TehB, core... [more]
A0A835YXG6_9STRA6.390e-6342.64Rhodanese domain-containing protein n=1 Tax=Tribon... [more]
A0A7S1J5A0_9EUGL2.140e-4637.74Hypothetical protein (Fragment) n=2 Tax=Eutreptiel... [more]
A0A7S2ZA17_9RHOD3.300e-4538.05Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
R1EYM2_EMIHU6.620e-4037.62Rhodanese domain-containing protein n=1 Tax=Emilia... [more]
A0A8J5XW86_DIALT5.730e-3936.09Rhodanese domain-containing protein n=1 Tax=Diacro... [more]
A0A5J4Z1S4_PORPP1.260e-3833.92Rhodanese domain-containing protein n=1 Tax=Porphy... [more]
A0A7S3E5W8_9RHOD1.100e-2641.62Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S1UFD9_9STRA1.530e-2337.27Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig1030contigS-latissima_F_contig1030:115673..120363 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Saccharina latissima female vs UniRef902022-09-19
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score101.7
Seed ortholog evalue1.8e-19
Seed eggNOG ortholog36331.EPrPI00000016298
KEGG koko:K18177
KEGG Pathwayko04714,map04714
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Coiled-coil-helix-coiled-coil-helix domain containing 8. Source PGD
EggNOG OGs1MI3S@121069,2E4K7@1,2SBFX@2759
COG Functional cat.S
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03029
Exons6
Model size2363
Cds size267
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig1030.285.1prot_S-latissima_F_contig1030.285.1Saccharina latissima SLPER63f femalepolypeptideS-latissima_F_contig1030 115727..116317 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815396.3803658-UTR-S-latissima_F_contig1030:115672..1157261622815396.3803658-UTR-S-latissima_F_contig1030:115672..115726Saccharina latissima SLPER63f femaleUTRS-latissima_F_contig1030 115673..115726 +
1693924859.5349238-UTR-S-latissima_F_contig1030:115672..1157261693924859.5349238-UTR-S-latissima_F_contig1030:115672..115726Saccharina latissima SLPER63f femaleUTRS-latissima_F_contig1030 115673..115726 +
1622815396.4202669-UTR-S-latissima_F_contig1030:116317..1169491622815396.4202669-UTR-S-latissima_F_contig1030:116317..116949Saccharina latissima SLPER63f femaleUTRS-latissima_F_contig1030 116318..116949 +
1693924859.5734673-UTR-S-latissima_F_contig1030:116317..1169491693924859.5734673-UTR-S-latissima_F_contig1030:116317..116949Saccharina latissima SLPER63f femaleUTRS-latissima_F_contig1030 116318..116949 +
1622815396.431415-UTR-S-latissima_F_contig1030:117423..1175571622815396.431415-UTR-S-latissima_F_contig1030:117423..117557Saccharina latissima SLPER63f femaleUTRS-latissima_F_contig1030 117424..117557 +
1693924859.584065-UTR-S-latissima_F_contig1030:117423..1175571693924859.584065-UTR-S-latissima_F_contig1030:117423..117557Saccharina latissima SLPER63f femaleUTRS-latissima_F_contig1030 117424..117557 +
1622815396.442791-UTR-S-latissima_F_contig1030:118129..1185951622815396.442791-UTR-S-latissima_F_contig1030:118129..118595Saccharina latissima SLPER63f femaleUTRS-latissima_F_contig1030 118130..118595 +
1693924859.5971456-UTR-S-latissima_F_contig1030:118129..1185951693924859.5971456-UTR-S-latissima_F_contig1030:118129..118595Saccharina latissima SLPER63f femaleUTRS-latissima_F_contig1030 118130..118595 +
1622815396.4580355-UTR-S-latissima_F_contig1030:118963..1190581622815396.4580355-UTR-S-latissima_F_contig1030:118963..119058Saccharina latissima SLPER63f femaleUTRS-latissima_F_contig1030 118964..119058 +
1693924859.605014-UTR-S-latissima_F_contig1030:118963..1190581693924859.605014-UTR-S-latissima_F_contig1030:118963..119058Saccharina latissima SLPER63f femaleUTRS-latissima_F_contig1030 118964..119058 +
1622815396.4714634-UTR-S-latissima_F_contig1030:119648..1203631622815396.4714634-UTR-S-latissima_F_contig1030:119648..120363Saccharina latissima SLPER63f femaleUTRS-latissima_F_contig1030 119649..120363 +
1693924859.6131086-UTR-S-latissima_F_contig1030:119648..1203631693924859.6131086-UTR-S-latissima_F_contig1030:119648..120363Saccharina latissima SLPER63f femaleUTRS-latissima_F_contig1030 119649..120363 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815396.3929982-CDS-S-latissima_F_contig1030:115726..1159241622815396.3929982-CDS-S-latissima_F_contig1030:115726..115924Saccharina latissima SLPER63f femaleCDSS-latissima_F_contig1030 115727..115924 +
1693924859.5479424-CDS-S-latissima_F_contig1030:115726..1159241693924859.5479424-CDS-S-latissima_F_contig1030:115726..115924Saccharina latissima SLPER63f femaleCDSS-latissima_F_contig1030 115727..115924 +
1622815396.405921-CDS-S-latissima_F_contig1030:116248..1163171622815396.405921-CDS-S-latissima_F_contig1030:116248..116317Saccharina latissima SLPER63f femaleCDSS-latissima_F_contig1030 116249..116317 +
1693924859.5591824-CDS-S-latissima_F_contig1030:116248..1163171693924859.5591824-CDS-S-latissima_F_contig1030:116248..116317Saccharina latissima SLPER63f femaleCDSS-latissima_F_contig1030 116249..116317 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-latissima_F_contig1030.285.1

>prot_S-latissima_F_contig1030.285.1 ID=prot_S-latissima_F_contig1030.285.1|Name=mRNA_S-latissima_F_contig1030.285.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=89bp
MVLEAPSRPPVPPSVIEDQHQGSKSDFGGEVDIEEAIDRSGCSLDYYRLE
ECLGEHDRDWRKCQAQVKALKACNDKKQKASKANQEST*
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mRNA from alignment at S-latissima_F_contig1030:115673..120363+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-latissima_F_contig1030.285.1 ID=mRNA_S-latissima_F_contig1030.285.1|Name=mRNA_S-latissima_F_contig1030.285.1|organism=Saccharina latissima SLPER63f female|type=mRNA|length=4691bp|location=Sequence derived from alignment at S-latissima_F_contig1030:115673..120363+ (Saccharina latissima SLPER63f female)
CGCACGCCGACGCAGCACACCACCGGGCAGCCTTGCGTACCAGACAACCG CCACATGGTTCTCGAAGCTCCTTCTCGCCCTCCTGTGCCTCCGTCCGTTA TCGAAGATCAGCATCAAGGTTCGAAGAGCGACTTCGGCGGAGAGGTAGAC ATCGAGGAAGCTATCGATCGCTCCGGTTGCTCCTTGGATTACTACAGACT GGAGGAGTGCCTTGGTGAGCACGATCGAGACTGGAGAAAGTGCCAAGCGC AGGTGAAGCTTAAGCAGCTTGCACTCGTTGCTGCAGCAGTGTCTTGCTGT ATTCATGTTCGGCATACGCAGTCTGACTATCTGACGACCGTCCACAAGGA GTGACGAGGCACCTTCATTGTTGCCCTCACGCCGAAGCTTGCTGCCTGGA AACAGCCACGTATAGTATCAAGAGGGTCGATGTTCGTCGGTCAGAGTACG CCCTCGCTACTGTAGCTGGGCACCTCAAAGGCACCTGCGCCACGGCTTTC GCCCAACCGTCCTCTGCACTCTGTACCCTGAACCTTTTAGCATTGTGCCT ACCATTTTATGTCGGGATTGTCGCAGGTGAAGGCGCTCAAGGCTTGCAAC GACAAGAAGCAAAAAGCATCGAAAGCCAACCAAGAATCAACGTAAAGCAC ACCAGCACTGCTGTGACCCCCGGGAGACAACAACAGTGAAGACAGCAACA ACACGCACCCACAGCAGCAGCAGCACCGACATCACCAAGCAGTCAACACG TATTGATACATACGTCCTGCCCAAAACAGCCCTGCTGTGCACCGCTGGTA CTGCTGTCCCCCTCAATGGCAGCCCTCAGCGCGCCACGCGCTTTGCTCGG TCTGTGGTGCCTGTCCTTGCAGACGTCGTGCGGCTTTCTCGTCCCGACAC CGCAAGGCGATGTCTGCGCCGCCTCACACACGCGACTGCGACGAGTGCCA CCGCCGTTGCCCGCAACATCACCCGTAGCGTCGACCCCCGCCGTCATCCC ACCGGCGAGCGGGATTGAAGCTGGCGACGGGGGCGGGGAGGGGATTAACG GCGTGGCTCCGCGGGCAGAGCGCCTTTCGTCGACAGACTTTGGGAAGTTC GTCAAACGACGGCAGGATGGGCTGGGCCGCGTGGTGGTCGATCTTCGGCC GAGCTCCGACTTCCACCGGGAGCACTTTGTGGGGGCGACTTCGATCCCTG CGGGGGAGCTCGAGTCGAGATTGTTGGAGCTGCCGCCGCCCTTCGCGGAG CCCTTGAACATCGTCGGCAACGAAGAGGTTCGTGCATCGTGGTTGAAGTT ATGGCTGTACCAGTATGATACTTCGTACGGGTACTTGTTCGTCACGCAGA AAAGACGGCACGGCGGTACCTGTGTACTCGTAGGGCTGCTTCGTGAAATG TACGTAACCCTACTCTGTAAAACTACAGTAGTATGAATAGTAGTACCTGG TAAACATTAACATTACCTGTACGTAGAAAGTGGCCGCCCTAATATGTAAA ACCAACTCTTAGAGAGCACCCAACAGGTACGTAATGCTATTTTATAAGCA GTGCCCGCCGGTAGTTCGATGACGCTCGCTATAGTATTACCTCGGGATAC CGGTATATACCAGTCGAACAGATTCAGCAGTTCCTTCAGCAGTACATACC TACTCGTTTTGCGCAGAACGCCCGAGACTTCTTTCGTTCATGTCTGAAAC GGCCATTCATCATCGTTGTCTGCTGATATTTGGTGCGCTTTCGTTTCACA GGACCTGCGAAAATCCAGCGATTTTCTGACGAGCAAAGGCTGGCGAATCG GCGCGGAAATTGTCGCGGACATGGTGACGGGGGGTAGGGCAGAGTGGCCC ACGGAGGCCGGCTCTCGCTCCGTTCAGGTCTGGAGGTGAGGTAACAACAG AGCCTTCATCACACCACACACTCCCGTGCAAACTTATTTACATACGAATA CCTGGGGGTAGTACTTGGTACCAGGTACCAGGTACCAGGCATGGTATACT CGTCATACCAGGCGAGTACCTGGCATTGAATAGTACATGGTACGTATGAT GTGTAATTGGTCTATGTACTCTGTACGATATTATGATAGTATTGCGGGGG AGCATAGTAAATAGGACCTACGGTACACACTAAAACCTATATATATTTAC TAAAGTTGTTTGGTCCTATTTACTATGGTACTCCGTAAGAATACAGTATG TACTTGAATAGCACAGATCATCGGATGGAAAATTGGCTTACTACATTTAT ATACGTAAACGTATAGCCCTATTTGTGGTCAGATGGCAAATCGTCAAATC GTATATACTGACCGCTATTTCAGAAAAAGGCTCTAATTCCAAGATGGCAA ACCATACGGACAATCTATGATATAATATATCTACCTGCGCTCAGCGGGAA TCCCGTACTGGGAGACGCCAAGCTTATACACACGAAATACCCCCCCACGT ATTGCAGGGCGAACGACTTTTTGGAGTTTTGCATGGAGCACTTCCTCCTG CCCTCGACCCTGGGCGAAACCGGCGCGGCAGAAGGAGCTATCGTTCTCGA CCTGGGCTGCGGCAGCGGGCGAGACACGGTCCACATGGCGCAGCACCTTC CGCCCGGCACGCGCGTGATCGGGGTAGACAACCATTCGTACGCGCTTGAA AGGGGCGAAAGGCTGGCTGAGCAGTGGGTGGACGCAGCGGATGGGGGAGG CACCGTAGGAGCAAGTTCGCACGACGGCAGCGAGTCGGATGGAGGAAGCG CCAGGGGTGAACCGAGCGACAAGCACGGGTCATTAAATCGCGGGCGCGCG CGTAGATGCGAGTGGCTACTGGCGGACCTCAGGAAGGAGGGGTCGCTTGA CGGACTAAAGGCGTCGGTGATCCACGGGCACCGGTTCAAGTGCGAGCAGC TGCTGCCTCTCCTTCGCGACGATGTGAGTTACACGCCCAGACTTTTACGT GGGTACAAAGCGCAACGCGCCTTGACGTGCACCGGACACACTTGAGAGGC ACGATGCGCCGTACTCCCAGGAGTGCGGACACCACAAGGATGCATGGTTT CTCAGACCCAGCCTGGACTCCTCTTTGGGCGGCAACGATGTATTGTGCTT GCTGGACCTCACCCAGAGACGGAAAATTGTTCACCGTATCTATTGTAGGG TCCCCGGTGCTAAAAATGTTACATTGCACACCTGGCTGGTGATATCACGC CTCTGTCATCTCGCAGCGTTTCTTGAGTCTGCCCTGTCACTGCACATCGC GTTCGTGCCCTCGGCGATACACCCTGTGCTCTGCGCCCCAGGTTCTGCTG CCGGGTGGGTTTTTCGTCTGGTCAACGTTTTTAGACACGGGCACGGAGAA TTTAGTACCTCCATGGCGACCAAGCCGCATGATGAGGTACGCACGCAAAG GCAGCAAGCGAATGTATCGAAAATGTGTGTGTGTTTTTTGTTGTTGTGTG TAGCTTGTGGCTCTCTGATTTCATAAATACTGGTGGTCACTAACGGGTAC CTCTAGACCTTCTGGTCTCGTGGTAGACCACCCGGATGCGTTTGGGGCGT TTCGTGCACCCCCGATGTCTGCAGTCGTTGTGGTGGAATCGAGCTGACAG CCCCGTGTGTAACTTACCGAATGCTTGTGGTGTTACGAAGTAGACATTGA CGTGCGTCGGTTGGATTCCAATCCGCTATGTATTTTGAAGATACGAGGTA CGAGTATCACAAACAGACGGCACATATTTGCGCTACGCGATAAACTGTTA CCTTTACAATGTGCGATATGCCCATGGCCGCTTTCTATGATAAATAGGAC CATAATAAATAGGACCAAACATTGTTGGCAAAAATAGCGAAATATATAGG TTTTTGTGTGTACCATAGGTCCTATTTACTATGGTCCCCCGTAAAAAATC GTTCGTGCTCCGCGTCGCGATTTTCATTCTGCCCTCCCTCCCTCCCTCCC TCCCGACGTTCTTGTTGTGCTGTCAGGCGCGGGGAGCTAGCAGACATCTT CTCAGGCCACGGTTTCGAAATCCTCGTTGACGAACAAGGCGAGCTGTCCA CGCGTGGCTCCGTCGTGTCGGCCAACTTTTTCGCGTGTCGAAAGAGGCCG AGCGTGCAACCCTCGATATTGTAGTTCCTTTTGATGCGCCCCCTTGTCGC GGATAGAAGATGCATCGGTTGGTCGGATGTACACGAGTCTGTTGCCGTAT GTATGACGCTAGCAAACGTTTGCCCCTGATTTTTGACGGTAGGGTGTGTG TTTTGTCTACTGTAAATCGCGTTCACTACGCCGCATGAGGCGCGCTACCC CCCCCGTATATGTGAGAGTTGAAAAGTATCGTGGAGCGCAGAGGAAGGGC ATTTGGCCACAGCAGTGGCCATGCGTGAGGCATGCAGCAGCTATCACAGA TATGGCGCAATGAAGTCGGGGGTGGGTGGAGCTTGATTCGTGACTGGGAT TTTCAGTGCAGGGTCGATATGTTGCGGAATCTCAATTTGGTTTTTAGGTA CATTTGTTTTGCGTATACGTATGATAGCCGGACAGCTACATGCATGTTGC GGGTTTAGTGTTTAACATGCGAATCCCGGCACGAAGGAAGTGCTGACCAA AATGTGTTATTCGTTGTGTGGGTATGATGGGCAACACGCAAAGGACCACC CAACAAAAAGCGACCGCAAACCCGAGGAGGTGTGGAGTGCC
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Coding sequence (CDS) from alignment at S-latissima_F_contig1030:115673..120363+

>mRNA_S-latissima_F_contig1030.285.1 ID=mRNA_S-latissima_F_contig1030.285.1|Name=mRNA_S-latissima_F_contig1030.285.1|organism=Saccharina latissima SLPER63f female|type=CDS|length=534bp|location=Sequence derived from alignment at S-latissima_F_contig1030:115673..120363+ (Saccharina latissima SLPER63f female)
ATGGTTCTCGAAGCTCCTTCTCGCCCTCCTGTGCCTCCGTCCGTTATCGA
AGATCAGCATCAAGGTTCGAAGAGCGACTTCGGCGGAGAGGTAGACATCG
AGGAAGCTATCGATCGCTCCGGTTGCTCCTTGGATTACTACAGACTGGAG
GAGTGCCTTGGTGAGCACGATCGAGACTGGAGAAAGTGCCAAGCGCAGAT
GGTTCTCGAAGCTCCTTCTCGCCCTCCTGTGCCTCCGTCCGTTATCGAAG
ATCAGCATCAAGGTTCGAAGAGCGACTTCGGCGGAGAGGTAGACATCGAG
GAAGCTATCGATCGCTCCGGTTGCTCCTTGGATTACTACAGACTGGAGGA
GTGCCTTGGTGAGCACGATCGAGACTGGAGAAAGTGCCAAGCGCAGGTGA
AGGCGCTCAAGGCTTGCAACGACAAGAAGCAAAAAGCATCGAAAGCCAAC
CAAGAATCAACGTAAGTGAAGGCGCTCAAGGCTTGCAACGACAAGAAGCA
AAAAGCATCGAAAGCCAACCAAGAATCAACGTAA
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