prot_S-latissima_F_contig974.17491.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig974.17491.1
Unique Nameprot_S-latissima_F_contig974.17491.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length266
Homology
BLAST of mRNA_S-latissima_F_contig974.17491.1 vs. uniprot
Match: A0A6H5KJK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJK5_9PHAE)

HSP 1 Score: 95.1 bits (235), Expect = 1.940e-18
Identity = 76/230 (33.04%), Postives = 96/230 (41.74%), Query Frame = 0
Query:   42 ASTGDGDCDLSNNTEECDYDGGDCCECTCVSTTQYVCGVRSGFSCLDPGASCFVDDGSNAATAPPASDGFPEGTLTPTPATVSTEAPTITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAGSSTASSSCIPGSLS-----------DGSCDSENNNEECGYDGGDCCECACVS--TSEFTCGENDGYDCVDPESSC-----------EELSVEGRSSAYRTAHTSSPVC 247
            AS GDG C   NN E CDYDGGDCCECTCV    Y CG  + F+C+DP A+C  DD   A  A    DG   G +         EA  I                                    A   C+   ++           DG C+  NNNE+CGYDGGDCCEC CV   ++EF C E   + C+DP + C           E   +E     Y   + ++ +C
Sbjct:   72 ASIGDGFCSDENNNEVCDYDGGDCCECTCVDAF-YPCGYVA-FACIDPSAACVDDDNITADIAESCHDGG--GYVAGLGNGYCNEANNIEECDYDAGDCCQCTCGIESDDLSDFSCVDFACVDPNAP--CVDDDVTEGMFEDCFNFGDGFCNDYNNNEQCGYDGGDCCECTCVVDWSAEFGCTE---FACIDPTAPCVDDDDVTADALENCMIEYLGDGYCDTYNNNEIC 292          
BLAST of mRNA_S-latissima_F_contig974.17491.1 vs. uniprot
Match: A0A6H5JTT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT4_9PHAE)

HSP 1 Score: 94.0 bits (232), Expect = 4.400e-18
Identity = 71/205 (34.63%), Postives = 87/205 (42.44%), Query Frame = 0
Query:   38 DCTEASTGDGDCDLSNNTEECDYDGGDCCECTCVSTTQYVCGVRSGFSCLDPGASCFVDDGSNAATAPPASDGFP--EGTLTPTPAT------------VSTEAPTITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAGSSTASSSCIPGS---LSDGSCDSENNNEECGYDGGDCCECACVSTSEFTCGENDGYDCVDPESSC 225
            DC+     DG+CD  NN  EC+YDGGDCC CTC + T Y CGV SGF C+DP A C  DD     T     D +   +G       T             + + P                                TA           G+   L+DG CD  NNNEECGYDGGDCC C C+    + CG   G+ C+DP + C
Sbjct:   31 DCSPDFYRDGECDTHNNNAECEYDGGDCCSCTCQNDT-YDCGV-SGFDCVDPSAECVDDDDIGTETVQNCGDPWAIGDGNCDKDNNTEECDYDGGDCCSCTCQVPDDGTGDDGSLCGESAVFACIDPDAPCVNDDDFTAFLPEVVKETCGGNIVHLADGDCDQINNNEECGYDGGDCCFCTCLDDF-YECGIR-GFACIDPSAEC 231          
BLAST of mRNA_S-latissima_F_contig974.17491.1 vs. uniprot
Match: D7FX77_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX77_ECTSI)

HSP 1 Score: 93.2 bits (230), Expect = 9.160e-18
Identity = 74/208 (35.58%), Postives = 90/208 (43.27%), Query Frame = 0
Query:   45 GDGDCDLSNNTEECDYDGGDCCECTCVSTTQYVCGVRSGFSCLDPGASCFVDDGSNAATAPPASDGFPEGTLTPTPATVSTE--------------APTITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAGSSTASSSCIPG--SLSDGSCDSENNNEECGYDGGDCCECACVSTSE-FTCGENDGYDCVDPESSCEELSVEGRSS 235
            GDG CD  NN EECD+DGGDCC CTC  ++ Y C   S   C DP A+C     S     P ASDG+ +          +TE              + T                               ++ + + SS C  G  ++SDG CDS NNN  C YDGGDCCEC C    E + CG   GY C+D  S C   S  G SS
Sbjct:  232 GDGSCDYYNNNEECDWDGGDCCSCTCEGSSYYSCSSYS-MDCQDPNANCTTP--SPTPYCPWASDGYCDSYY-------NTEDCDWDGGDCCAYGCSSTTCLDPIYGCDSITTYYGDNDVSTSTFSTYLTSSDADSVSSGCFDGDWAVSDGKCDSGNNNAACDYDGGDCCECDCYDYGEVYECGVV-GYYCLDQTSLCYG-STSGESS 427          
BLAST of mRNA_S-latissima_F_contig974.17491.1 vs. uniprot
Match: D7FI82_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI82_ECTSI)

HSP 1 Score: 84.7 bits (208), Expect = 3.340e-17
Identity = 56/164 (34.15%), Postives = 66/164 (40.24%), Query Frame = 0
Query:   42 ASTGDGDCDLSNNTEECDYDGGDCCECTCV---STTQYVCGVRSGFSCLDPGASCFVDDGSNAATAPPASDGFPEGTLTPTPATVSTEAPTITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAGSSTASSSCIPGSLSDGSCDSENNNEECGYDGGDCCECAC 202
            AS GDG CD  NN E C YDGGDCCECTCV   S  +Y      GF+C+DP ASCF  D                 TL                                                   + +C   S+ +G C+ +NNN +CGYDGGDCCEC C
Sbjct:   14 ASVGDGICDEENNNELCGYDGGDCCECTCVPSVSAGEYSVSCEYGFACIDPNASCFDKD----------------FTL-------------------------------------------------DMADNCYHNSIGNGYCNCQNNNADCGYDGGDCCECTC 112          
BLAST of mRNA_S-latissima_F_contig974.17491.1 vs. uniprot
Match: D8LEP6_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEP6_ECTSI)

HSP 1 Score: 90.1 bits (222), Expect = 4.360e-17
Identity = 72/232 (31.03%), Postives = 101/232 (43.53%), Query Frame = 0
Query:   11 LAVLGSLLVLLSG-SNVVAMSSSSSPLLDCTEASTGDGDCDLSNNTEECDYDGGDCCECTCVSTTQYVCGVRSGFSCLDPGASCFVDDG------SNAATAPPASDGFPEGTLTPTPATVS-------TEAPTITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAGSSTASSSCIPGSLSDGSCDSENNNEECGYDGGDCCECACVSTS---EFTCGENDGYDCVDPESSC 225
            L +LG+ +++ S  S+VVA +S      D  +   G+G C++ NN EEC +DGGDCCECTC    +Y CG   G++C+DP A+C  DD        N        +G  +  L               T  P+                                  ++     C  G + +G CD  NN+ EC YDGGDCCEC C S     E+ C E   + C+DPE+ C
Sbjct:   65 LGLLGAAVIMWSSASSVVATTSDQFDACDAAQ-DIGNGRCNMGNNIEECGFDGGDCCECTCEDG-EYTCGQYYGYACIDPDATCVDDDAVTVDMMENCYDPSRIGNGACDSLLNNEDCAYDGGDCCECTCDPSRYPWYDSGVGCQTGMYGGFACIDPDAPCVDDDIVTAEMMDLCSTGQIGNGYCDDSNNSPECAYDGGDCCECTCESHDDGYEYYC-EPGSFACIDPEAEC 293          
BLAST of mRNA_S-latissima_F_contig974.17491.1 vs. uniprot
Match: A0A6H5JVP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVP4_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 6.220e-17
Identity = 73/198 (36.87%), Postives = 86/198 (43.43%), Query Frame = 0
Query:   35 PLLDCTEASTGDGDCDLSNNTEECDYDGGDCCECTCVSTTQYVCGVRSG-FSCLDPGASCFVDDGSNAATAPPASDGFPEGTLTPTPATVSTEAPTITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAGSSTASSSCIPGS------LSDGSCDSENNNEECGYDGGDCCECACVSTSEFT--CGE-NDGYDCVDPE 222
            P  +   A  GD  CDL  N  EC +DGGDCCECTCV T   VCG   G + C+DP      D   + A+AP           +PTP T S  APT +                                S  AS    PG       + DG CD +NN   CG+DGGDCC C C   +E    CG  NDGYDC DP+
Sbjct:   62 PDCEADTALVGDSICDLDFNVAECGFDGGDCCECTCVDTGDQVCGEGGGGYFCVDP------DAPQDCASAP-----------SPTPNTPS--APTSSDAIDVTAGPT----------------------SLDASDDPYPGCGGYIPHIGDGYCDEDNNTAACGFDGGDCCACTCGMDAEVDHECGLLNDGYDCRDPD 218          
BLAST of mRNA_S-latissima_F_contig974.17491.1 vs. uniprot
Match: A0A6H5JM92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM92_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 7.170e-17
Identity = 70/190 (36.84%), Postives = 85/190 (44.74%), Query Frame = 0
Query:   45 GDGDCDLSNNTEECDYDGGDCCECTCVSTTQYVCGVRSGFSCLDPGASCFVDDG------SNAATAPPASDGF-PEGTLTPTPATVSTEAPTITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAGSSTASSSCIPGSLSDGSCDSENNNEECGYDGGDCCECACVST--SEFTCGENDGYDCVDPESSC 225
            G+G CD+ NN E C YDGGDCCECTC S        R+ F+C+DP A C  DD        N   A    DG+  E   TP  A    +    T         XXXX                T           P ++ DG CD  NNNE CGYDGGDCCEC C +    ++ C E   + C+DP + C
Sbjct:  289 GNGWCDVDNNNELCAYDGGDCCECTCESLEDDDWACRNNFACVDPNAPCVDDDSVTIDMLENCPWAVGIGDGYCSEDLNTPECAYDGGDCCACTCQNDVDDDWXXXXFACIDPEAACVNDDDITVDMFVNCE--YPVNVGDGWCDQGNNNEACGYDGGDCCECTCENERDEDYRCME---FSCIDPSAPC 473          
BLAST of mRNA_S-latissima_F_contig974.17491.1 vs. uniprot
Match: D7G136_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G136_ECTSI)

HSP 1 Score: 89.7 bits (221), Expect = 7.470e-17
Identity = 78/190 (41.05%), Postives = 100/190 (52.63%), Query Frame = 0
Query:   39 CTEASTGDGDCDLSNNTEECDYDGGDCCECTCVSTTQYVCGVRSGFSCLDPGASCFVDDGSNAATAPPASDGFPEGTLTPTPATVSTEAPTITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAGSSTASSSCIPGSLSDGSCDSENNNEECGYDGGDCCECACVSTSEFTCGENDGYDCVDPE-SSCEE 227
            C  A    G C  +NN  +C +D GDCC C C        G    + C++P +SC+ DD  +A T  P +D      LTP P    +   TITXXXXXXXXXXX                  T   + + S C    + DG CD +NNNE+C +DGGDCCEC C +TS + CG ND YDC+DP  ++CEE
Sbjct:  213 CRTADYNTGICTEANNNADCTFDDGDCCWCDCDHENCPPPGDED-YDCVNPDSSCYGDD-PDATTPAPVTD------LTPGPTPADS---TITXXXXXXXXXXXTLVDGAAAPVSE------TPSPTPSLSLCDDLRIGDGLCDDDNNNEDCLWDGGDCCECTCDTTSIYRCGAND-YDCLDPSGTTCEE 384          
BLAST of mRNA_S-latissima_F_contig974.17491.1 vs. uniprot
Match: D7FI87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI87_ECTSI)

HSP 1 Score: 89.7 bits (221), Expect = 1.220e-16
Identity = 60/196 (30.61%), Postives = 75/196 (38.27%), Query Frame = 0
Query:   39 CTEASTGDGDCDLSNNTEECDYDGGDCCECTCVST----TQYVCGVRS-GFSCLDPGASCFVDDGSNAATAPPASDGFPEGTLTPTPATVSTEAPTITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAGSSTASSSCIPGSLSDGSCDSENNNEECGYDGGDCCECACVSTSE----FTCGENDGYDCVDPESSC 225
            C E   GDG C L NN  EC YDGGDCCECTC +      ++ C     GF+C+DP A C  DD      A                                                                 +C+   L +G CD +NNNE CGYD GDCCEC CVS  +    +   +  G+ C+DP + C
Sbjct:   24 CWEDGFGDGYCQLQNNNAECGYDGGDCCECTCQNPWGDDDEWFCSKDGYGFACIDPDAPCVDDDDITIEIA----------------------------------------------------------------QNCVTSDLGNGYCDEDNNNEICGYDFGDCCECTCVSPWDDDDWYCSSDGSGFACIDPAAPC 155          
BLAST of mRNA_S-latissima_F_contig974.17491.1 vs. uniprot
Match: D7G0S4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S4_ECTSI)

HSP 1 Score: 87.8 bits (216), Expect = 1.250e-16
Identity = 65/198 (32.83%), Postives = 78/198 (39.39%), Query Frame = 0
Query:   37 LDCTEASTGDGDCDLSNNTEECDYDGGDCCECTCVST--TQYVCGVRSGFSCLDPGASCFVDDGSNAATAPPASDGFPEGTLTPTPATVSTEAPTITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAGSSTASSSCIPGSLSDGSCDSENNNEECGYDGGDCCECAC--VSTSE-----FTCGENDGYDCVDPESSC 225
            L+C     GDG CD  NN E C YDGGDCCECTCV+     Y C   S  +C+DP A C  DD                        TV                                             +    GS+ +G CD ENNNE CGYDGGDCCEC C  + T +     F  G  +G+ C+DP + C
Sbjct:   54 LNCFPREFGDGWCDQENNNEICGYDGGDCCECTCVNAWDDDYSCAANS--ACIDPSAPCVDDDD----------------------VTVD-----------------------------------------MVENCGYVGSVGNGWCDEENNNEGCGYDGGDCCECTCQPLDTDDGTDDYFQNGCGNGFACIDPNAPC 186          
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig974.17491.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KJK5_9PHAE1.940e-1833.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTT4_9PHAE4.400e-1834.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FX77_ECTSI9.160e-1835.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FI82_ECTSI3.340e-1734.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LEP6_ECTSI4.360e-1731.03Uncharacterized protein n=3 Tax=Ectocarpus silicul... [more]
A0A6H5JVP4_9PHAE6.220e-1736.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JM92_9PHAE7.170e-1736.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G136_ECTSI7.470e-1741.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FI87_ECTSI1.220e-1630.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G0S4_ECTSI1.250e-1632.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Saccharina latissima female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000800Notch domainSMARTSM00004NL_2coord: 164..198
e-value: 4.4E-4
score: 27.9
coord: 32..66
e-value: 0.0018
score: 23.0
IPR000800Notch domainPFAMPF00066Notchcoord: 176..197
e-value: 2.4E-4
score: 21.5
IPR000800Notch domainPROSITEPS50258LNRcoord: 32..65
score: 9.989
IPR000800Notch domainPROSITEPS50258LNRcoord: 165..197
score: 10.613
NoneNo IPR availablePANTHERPTHR46130:SF3coord: 38..70
NoneNo IPR availablePANTHERPTHR46130FAMILY NOT NAMEDcoord: 38..70
coord: 168..200
NoneNo IPR availablePANTHERPTHR46130:SF3coord: 168..200
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 40..265
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..39
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..39
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.776
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig974contigS-latissima_F_contig974:27247..31676 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig974.17491.1mRNA_S-latissima_F_contig974.17491.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig974 27159..37274 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig974.17491.1 ID=prot_S-latissima_F_contig974.17491.1|Name=mRNA_S-latissima_F_contig974.17491.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=266bp
MKAQRYHSLGLAVLGSLLVLLSGSNVVAMSSSSSPLLDCTEASTGDGDCD
LSNNTEECDYDGGDCCECTCVSTTQYVCGVRSGFSCLDPGASCFVDDGSN
AATAPPASDGFPEGTLTPTPATVSTEAPTITASTEAPFITTPTEAPSITT
PAEETATTFPTAGSSTASSSCIPGSLSDGSCDSENNNEECGYDGGDCCEC
ACVSTSEFTCGENDGYDCVDPESSCEELSVEGRSSAYRTAHTSSPVCWQL
AMCFFVLSLRRLSQQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000800Notch_dom