prot_S-latissima_F_contig97.17462.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig97.17462.1
Unique Nameprot_S-latissima_F_contig97.17462.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length53
Homology
BLAST of mRNA_S-latissima_F_contig97.17462.1 vs. uniprot
Match: D7G3U9_ECTSI (ATP-dependent DNA helicase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3U9_ECTSI)

HSP 1 Score: 70.5 bits (171), Expect = 7.400e-13
Identity = 38/52 (73.08%), Postives = 42/52 (80.77%), Query Frame = 0
Query:    2 GRLLTVAFQGKQAASVGGTTVHSVCDSPRGDAEGNLSGAHDDQAPLPAKKAV 53
            GRLLTVA+QGKQAASVGGTTVHSVC +   D  GNLSG HDDQ+ LP  KA+
Sbjct: 1564 GRLLTVAYQGKQAASVGGTTVHSVCSTGSRDG-GNLSGDHDDQSSLPDAKAM 1614          
BLAST of mRNA_S-latissima_F_contig97.17462.1 vs. uniprot
Match: A0A6H5KIB1_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIB1_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 5.870e-11
Identity = 35/51 (68.63%), Postives = 41/51 (80.39%), Query Frame = 0
Query:    3 RLLTVAFQGKQAASVGGTTVHSVCDSPRGDAEGNLSGAHDDQAPLPAKKAV 53
            RLL VAFQGKQAA+VGGTTVHSVC +   D++G LSGAH+ Q+ LPA KA 
Sbjct: 1801 RLLCVAFQGKQAAAVGGTTVHSVCPNTD-DSDGCLSGAHEGQSTLPASKAA 1850          
BLAST of mRNA_S-latissima_F_contig97.17462.1 vs. uniprot
Match: A0A6H5KXW4_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXW4_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 7.990e-11
Identity = 35/51 (68.63%), Postives = 41/51 (80.39%), Query Frame = 0
Query:    3 RLLTVAFQGKQAASVGGTTVHSVCDSPRGDAEGNLSGAHDDQAPLPAKKAV 53
            RLL VAFQGKQAA+VGGTTVHSVC +  GD+ G LSGAH+ Q+ LPA +A 
Sbjct:  352 RLLCVAFQGKQAAAVGGTTVHSVCPNT-GDSYGCLSGAHEGQSTLPASEAA 401          
BLAST of mRNA_S-latissima_F_contig97.17462.1 vs. uniprot
Match: A0A6H5JN07_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN07_9PHAE)

HSP 1 Score: 58.5 bits (140), Expect = 1.200e-8
Identity = 28/53 (52.83%), Postives = 39/53 (73.58%), Query Frame = 0
Query:    1 EGRLLTVAFQGKQAASVGGTTVHSVCDSPRGDAEGNLSGAHDDQAPLPAKKAV 53
            + R+L VAF+G+QAA+VGGTT+HSVC   R    G+LS  HDDQ+P+   +A+
Sbjct: 1463 DSRMLAVAFRGQQAAAVGGTTIHSVCQVGRKTFRGSLSRNHDDQSPMKDTQAI 1515          
BLAST of mRNA_S-latissima_F_contig97.17462.1 vs. uniprot
Match: A0A6H5K882_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K882_9PHAE)

HSP 1 Score: 54.3 bits (129), Expect = 3.740e-7
Identity = 30/53 (56.60%), Postives = 35/53 (66.04%), Query Frame = 0
Query:    1 EGRLLTVAFQGKQAASVGGTTVHSVCDSPRGDAEGNLSGAHDDQAPLPAKKAV 53
            EG +L VAFQGKQAASVGGTT+HSVC+ P     G     HDDQ  L   +A+
Sbjct: 1105 EGGMLAVAFQGKQAASVGGTTIHSVCNVPGRKGSGGKD--HDDQKGLTEDQAL 1155          
BLAST of mRNA_S-latissima_F_contig97.17462.1 vs. uniprot
Match: A0A6H5KPD9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPD9_9PHAE)

HSP 1 Score: 50.8 bits (120), Expect = 2.540e-6
Identity = 26/36 (72.22%), Postives = 27/36 (75.00%), Query Frame = 0
Query:    2 GRLLTVAFQGKQAASVGGTTVHSVCDSPRGDAEGNL 37
            GRLLT+AFQGKQAA VGG TVHS  D PR D  G L
Sbjct:   99 GRLLTLAFQGKQAACVGGNTVHSATDVPRTDKGGTL 134          
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig97.17462.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7G3U9_ECTSI7.400e-1373.08ATP-dependent DNA helicase n=2 Tax=Ectocarpus sili... [more]
A0A6H5KIB1_9PHAE5.870e-1168.63ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5KXW4_9PHAE7.990e-1168.63ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5JN07_9PHAE1.200e-852.83ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5K882_9PHAE3.740e-756.60ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5KPD9_9PHAE2.540e-672.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig97contigS-latissima_F_contig97:517785..517943 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig97.17462.1mRNA_S-latissima_F_contig97.17462.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig97 517785..517943 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig97.17462.1 ID=prot_S-latissima_F_contig97.17462.1|Name=mRNA_S-latissima_F_contig97.17462.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=53bp
EGRLLTVAFQGKQAASVGGTTVHSVCDSPRGDAEGNLSGAHDDQAPLPAK
KAV
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