prot_S-latissima_F_contig1077.652.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig1077.652.1
Unique Nameprot_S-latissima_F_contig1077.652.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length211
Homology
BLAST of mRNA_S-latissima_F_contig1077.652.1 vs. uniprot
Match: D8LDW6_ECTSI (Cupin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDW6_ECTSI)

HSP 1 Score: 157 bits (396), Expect = 1.750e-44
Identity = 80/182 (43.96%), Postives = 112/182 (61.54%), Query Frame = 0
Query:   28 FDSEDFVFDLQGAEPEVEGEAGTVKVANLGNVPVLSGEGVSYALVDIEPCGLNLPHHHPRAAEFGYIIKSESSTSVRHAFVEENSGR-LIMNDIGEGQVALVPGGLVHFVQNMGCSPATFLAAFSSPDPGVLTTTTQGIAMLPEGTIQAALALGSDEAYAIIAGLPEGVVQGEKECLKRCGL 208
            F+ EDFVF L G EP+   +   ++ A LG +P L G+G++ ALV+++ C +NLPH HPRA E  Y+I  E    +R AFVEEN G   ++ND+ +G V   P GL+H+ QN+GC P TFLAA ++ DPG +T TT+    LP   IQA+L         +I  LP+      ++CL+RCGL
Sbjct:   37 FNPEDFVFTLGGPEPDAPVDGFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEMQYVINGEH---LRVAFVEENGGEGAVVNDLSQGDVTFFPQGLIHYEQNLGCEPVTFLAALNNDDPGAVTITTRFFE-LPSEAIQASLNFEDPALQRLIESLPDAPAAARRQCLERCGL 214          
BLAST of mRNA_S-latissima_F_contig1077.652.1 vs. uniprot
Match: A0A836CNU2_9STRA (RmlC-like cupin domain-containing protein n=7 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNU2_9STRA)

HSP 1 Score: 147 bits (370), Expect = 2.150e-40
Identity = 90/216 (41.67%), Postives = 122/216 (56.48%), Query Frame = 0
Query:    5 PSRSLRLNDKGDVDVP---RLDFRQQF-DSEDFVFDLQGAEPEVEGEAGTVKVANLGNVPVLSGEGVSYALVDIEPCGLNLPHHHPRAAEFGYIIKSESSTSVRHAFVEENSGRLIMNDIGEGQVALVPGGLVHFVQNMGCSPATFLAAFSSPDPGVLTTTT---QGIAM---LPEGTIQAALALGSDEAYAIIAGLPEGVVQGEKECLKRCGLDY 210
            P +  +L D+  +      R  FR QF D+ DF FDL G++       G+ +  +   +P L+GE V+   + +EPCG+NLPH HPRA E  Y++ + ++  V  AFVEEN GR I N I  G+ A  P GL H   NMGC+PAT +AA  S D GV T TT   +G+A    L EG + AAL +  D+   +I G P+G   G  EC +RCGL Y
Sbjct:   29 PKKYRQLTDEASLSFALPTRAAFRAQFTDNTDFKFDLDGSKATTGNGGGSAQTLSAAQLPSLTGEKVAMVKLVLEPCGINLPHVHPRATEILYVVDA-AAEGVLTAFVEENGGRTIENTIVTGEAAFFPQGLTHVQVNMGCTPATMIAALGSDDFGVQTITTTALKGLAGADGLGEG-LAAALGISQDQLAVLIGGFPDGPAIGAAECRQRCGLPY 242          
BLAST of mRNA_S-latissima_F_contig1077.652.1 vs. uniprot
Match: A0A835YZF9_9STRA (RmlC-like cupin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZF9_9STRA)

HSP 1 Score: 139 bits (350), Expect = 5.040e-38
Identity = 83/191 (43.46%), Postives = 111/191 (58.12%), Query Frame = 0
Query:   25 RQQF-DSEDFVFDLQGAEPEVEGEAGTVKVANLGNVPVLSGEGVSYALVDIEPCGLNLPHHHPRAAEFGYIIKSESSTSVRHAFVEENSGRLIMNDIGEGQVALVPGGLVHFVQNMGCSPATFLAAFSSPDPGVLTTTT---QGIAM---LPEGTIQAALALGSDEAYAIIAGLPEGVVQGEKECLKRCGL 208
            R QF D+ DF FDL G+        G+ +  +   +P L+GE V+   + +EPCG+NLPH HPRA E  Y++ + ++  V  AFVEEN GR I N +  G+ A  P GL H   NMGC+PAT +AA  S D GV T TT   +G+A    L EG + AAL +  D+   +I G P+G   G  EC +RCGL
Sbjct:    1 RAQFTDNTDFKFDLAGSTATAGNGGGSAQTLSAAQLPSLTGEKVAMVKLVLEPCGINLPHVHPRATEILYVVDA-AAEGVLTAFVEENGGRTIENTVVAGEAAFFPQGLTHMQVNMGCTPATMIAALGSDDFGVQTITTTALEGLAGAEGLGEG-LAAALGISQDQLAVLIGGFPDGPAIGAAECRQRCGL 189          
BLAST of mRNA_S-latissima_F_contig1077.652.1 vs. uniprot
Match: A0A0G4EJ88_VITBC (Cupin type-1 domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EJ88_VITBC)

HSP 1 Score: 139 bits (351), Expect = 9.960e-37
Identity = 85/204 (41.67%), Postives = 111/204 (54.41%), Query Frame = 0
Query:   12 NDKGDVDVP--RLDFRQQFD-SEDFVFDLQGAEPEVE--GEAGTVKVANLGNVPVLSGEGVSYALVDIEPCGLNLPHHHPRAAEFGYIIKSESSTSVRHAFVEENSGRLIMNDIGEGQVALVPGGLVHFVQNMGCSPATFLAAFSSPDPGVLTTTTQGIAMLPEGTIQAALALGSDEAYAIIAGLPEGVVQG--EKECLKRCGL 208
            ++ G+ DVP  R  FR QFD S DF+FD   A  E +  G+ G V  A++   P LSG G+S+ LVD+ PC +N PH HPRA E  YIIK   S      F EEN GR++ ND+ EG  A  P  L+H+  N  C PA F+A  +S D GV T   Q    LP+  +  AL +   E   +   LP G   G   +EC ++CGL
Sbjct:  121 DENGEPDVPLSRRAFRNQFDESSDFIFDFNTARAEADTNGQGGAVTGASVSQWPALSGHGLSHTLVDLAPCSINTPHVHPRATEIIYIIKGRVSVG----FAEENGGRIVTNDVKEGDTAFFPHTLIHWQFNPTCEPAQFIATLNSDDGGVQTIA-QAFFGLPDDVLATALGVDEYEVAVLREELPAGPALGLQREECRRKCGL 319          
BLAST of mRNA_S-latissima_F_contig1077.652.1 vs. uniprot
Match: A0A835Z488_9STRA (RmlC-like cupin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z488_9STRA)

HSP 1 Score: 136 bits (343), Expect = 2.370e-36
Identity = 81/195 (41.54%), Postives = 113/195 (57.95%), Query Frame = 0
Query:   21 RLDFRQQF-DSEDFVFDLQGAEPEVEGEAGTVKVANLGNVPVLSGEGVSYALVDIEPCGLNLPHHHPRAAEFGYIIKSESSTSVRHAFVEENSGRLIMNDIGEGQVALVPGGLVHFVQNMGCSPATFLAAFSSPDPGVLTTTT---QGIAM---LPEGTIQAALALGSDEAYAIIAGLPEGVVQGEKECLKRCGL 208
            R  FR QF ++EDF F++  ++       G+ +  +   +P L+GE V+   + ++PCG+NLPH HPRA E  Y+I + +   V  AFVEEN GR I N I  G+ A  P GL H   NMGC+PAT +AA  S D GV T T+   +G+A    L EG + AAL +  D+   ++ G P+G   G  EC +RCGL
Sbjct:   49 RAAFRAQFVNNEDFTFNIDASKATTGNGGGSAQTLSAAQLPSLTGEKVAMVKLVLQPCGINLPHVHPRATEILYVIDAPAE-GVLTAFVEENGGRTIENTIVTGEAAFFPQGLTHVQVNMGCAPATMIAALGSDDFGVQTITSAALKGLAAAEGLGEG-LAAALGIAQDQLALLVGGFPDGPAIGAAECRQRCGL 241          
BLAST of mRNA_S-latissima_F_contig1077.652.1 vs. uniprot
Match: A0A507FDZ0_9FUNG (Cupin type-1 domain-containing protein n=2 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FDZ0_9FUNG)

HSP 1 Score: 136 bits (343), Expect = 2.770e-36
Identity = 78/210 (37.14%), Postives = 119/210 (56.67%), Query Frame = 0
Query:    1 AAGAPSRSLRLNDKGDVDVPRLDFRQQFDSEDFVFDLQGAEPEVE-GEAGTVKVANLGNVPVLSGEGVSYALVDIEPCGLNLPHHHPRAAEFGYIIKSESSTSVRHAFVEENSGRLIMNDIGEGQVALVPGGLVHFVQNMGCSPATFLAAFSSPDPGVLTTTTQGIAMLPEGTIQAALALGSD-EAYAIIAGLPEGVVQGEKECLKRCGL 208
            A  A   S   ++  D     +   +QF+ EDF+ DL       E G+ G++   NLG++P L+ +G++  L+++ PCG NLPH HPRA+E  Y+I+     +V+  F+EEN  ++I+ND+ +GQ   +P G +H+  N+GC  A  +AA ++ DPG LT   Q    LP+G I A+L    D E  A+   LP     G +ECL+RCG 
Sbjct:   18 AQSASPPSSTTSEPFDYSKTEVQRMKQFNHEDFITDLLHNPKSTEVGKGGSLAKMNLGSMPALARQGLAMVLINLNPCGANLPHVHPRASEAIYVIQG----NVQVGFIEENGAKVIVNDLVQGQATFIPQGSIHYQVNLGCEQAVMIAANNNEDPGTLTIPAQFF-KLPDGAIAASLGGTLDPEIRALNGSLPMNPAPGVEECLRRCGF 222          
BLAST of mRNA_S-latissima_F_contig1077.652.1 vs. uniprot
Match: A0A0L0GAB9_9EUKA (Cupin type-1 domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0GAB9_9EUKA)

HSP 1 Score: 129 bits (325), Expect = 4.600e-34
Identity = 81/198 (40.91%), Postives = 106/198 (53.54%), Query Frame = 0
Query:   19 VPRLDFRQQFDSEDFVFDLQ----GAEPEVEGEAGTVKVANLGNVPVLSGEGVSYALVDIEPCGLNLPHHHPRAAEFGYIIKSESSTSVRHAFVEENSGRLIMNDIGEGQVALVPGGLVHFVQNMGCSPATFLAAFSSPDPGVLTTTTQGIAMLPEGTIQAALALGSDEAYAIIA----GLPEGVVQGEKECLKRCGL 208
            V  L +   FD+EDFVFD      G   + +G  G+ + AN+   PV+    ++     I PCG+NLPH HPR  E  Y+I+ E +      FV E SGR ++NDI   Q    P GL+H+ QNMGC PA F++   S DPG+L      +A LPE  I AA     DE  A +A    GLP+   +G  ECL RCGL
Sbjct:   13 VSALRYMDNFDAEDFVFDFSDFETGVRVDSDGNGGSSQPANINTFPVVQVANMAQTRFRIAPCGINLPHVHPRGTESAYMIEGELTVG----FVME-SGRTVINDIKADQSTFFPQGLLHYQQNMGCEPAGFISILDSSDPGLLVIAA-AVAGLPEEAIAAAF----DEDEAFVAQMRMGLPKVPARGRAECLVRCGL 200          
BLAST of mRNA_S-latissima_F_contig1077.652.1 vs. uniprot
Match: A0A815GW40_9BILA (Hypothetical protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A815GW40_9BILA)

HSP 1 Score: 131 bits (329), Expect = 3.030e-33
Identity = 77/197 (39.09%), Postives = 108/197 (54.82%), Query Frame = 0
Query:   14 KGDVDVPRLDFRQQFDSEDFVFDLQGAEPEVE-GEAGTVKVANLGNVPVLSGEGVSYALVDIEPCGLNLPHHHPRAAEFGYIIKSESSTSVRHAFVEENSGRLIMNDIGEGQVALVPGGLVHFVQNMGCSPATFLAAFSSPDPGVLTTTTQGIAMLPEGTIQAALA-LGSDEAYAIIAGLPEGVVQGEKECLKRCGL 208
            KG V+   L+ +    S ++VFD + A+  V  G  G V  AN  N P+L    ++  +  +EPCG+NLPH HPRA E  Y  K +  T     F +EN G+ + + + EGQV++ P G +HF QNMGC  A F+AAF   DPG LT    G   LP   + A+L  +  D+   + + LP+    G +ECL RCGL
Sbjct:  134 KGSVNEISLEEKLANMSSNYVFDFKNAQVGVSTGNGGRVVSANARNFPILINHKIAMTVGFLEPCGMNLPHVHPRATEINYAAKGDFQTG----FFQENGGKFVGHIVREGQVSVFPQGAIHFEQNMGCETAMFVAAFDHEDPGTLTIA-DGFFSLPTDILAASLGGISEDDVMRLGSNLPKNAGFGTEECLIRCGL 325          
BLAST of mRNA_S-latissima_F_contig1077.652.1 vs. uniprot
Match: A0A0L0FUE8_9EUKA (Cupin type-1 domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FUE8_9EUKA)

HSP 1 Score: 129 bits (323), Expect = 7.940e-33
Identity = 77/185 (41.62%), Postives = 100/185 (54.05%), Query Frame = 0
Query:   24 FRQQFDSEDFVFDLQGAEPEVEGEAGTVKVANLGNVPVLSGEGVSYALVDIEPCGLNLPHHHPRAAEFGYIIKSESSTSVRHAFVEENSGRLIMNDIGEGQVALVPGGLVHFVQNMGCSPATFLAAFSSPDPGVLTTTTQGIAMLPEGTIQAALALGSDEAYAIIAGLPEGVVQGEKECLKRCGL 208
            F   FD+EDFV D      E  G  GT + AN  NVPV+    ++     I PCG+NLPH HPR  E  YII  E + +V   FV E  GRLI+ND+   Q    P GL+H+ QNM C PA F++  +S DPG+L      +A LP   ++A     +     +  GLP G  +G  ECL+RCGL
Sbjct:  115 FLNNFDAEDFVIDFATQPLESTGLGGTSQPANRNNVPVIQASNMAQTRFRIAPCGINLPHVHPRGTESVYII--EGALTV--GFVTEG-GRLILNDVKTDQSTFFPQGLLHYQQNMACEPAGFISILNSSDPGLLVIPA-ALAELPSEALEATFDEDAAFVNQLRIGLPAGPARGRAECLRRCGL 293          
BLAST of mRNA_S-latissima_F_contig1077.652.1 vs. uniprot
Match: A0A836CHA5_9STRA (RmlC-like cupin domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHA5_9STRA)

HSP 1 Score: 124 bits (312), Expect = 1.020e-31
Identity = 81/198 (40.91%), Postives = 104/198 (52.53%), Query Frame = 0
Query:   21 RLDFRQQFDSEDFVFDLQGAEPEVEGEAGTVKVANLGNVPVLSGEGVSYALVDIEPCGLNLPHHHPRAAEFGYIIKSESSTSVRHAFVEENSG----RLIMNDIGEGQVALVPGGLVHFVQNMGCSPATFLAAFSSPDPGVLTTTTQGIA------MLPEGTIQAALALGSDEAYAIIAGLPEGVVQGEKECLKRCGL 208
            R  FR QF  E+F FDL G +    GE G+V+      +P L+GE V+       PCG+NLPH HPRA E  +++ + +   V  AFVEEN      R I N +  GQ    P GLVH   NMGC+PAT +AA  S D GV T TT  IA       L EGT  AA  +  D+   ++ G P     G +EC +RC +
Sbjct:   54 RAAFRAQFPPEEFKFDLAGLDVPP-GEGGSVQALGAAQLPSLTGEKVAM------PCGINLPHVHPRATEILFVVDA-APEGVLMAFVEENVAMQGPRAITNTVTTGQATFFPQGLVHMQVNMGCTPATMIAALGSDDFGVQTITTTAIAGLAYDENLKEGTA-AAFGISQDQLIHLVEGFPGNPAAGAEECRQRCNI 242          
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig1077.652.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDW6_ECTSI1.750e-4443.96Cupin-like protein n=1 Tax=Ectocarpus siliculosus ... [more]
A0A836CNU2_9STRA2.150e-4041.67RmlC-like cupin domain-containing protein n=7 Tax=... [more]
A0A835YZF9_9STRA5.040e-3843.46RmlC-like cupin domain-containing protein n=1 Tax=... [more]
A0A0G4EJ88_VITBC9.960e-3741.67Cupin type-1 domain-containing protein n=2 Tax=Vit... [more]
A0A835Z488_9STRA2.370e-3641.54RmlC-like cupin domain-containing protein n=1 Tax=... [more]
A0A507FDZ0_9FUNG2.770e-3637.14Cupin type-1 domain-containing protein n=2 Tax=Chy... [more]
A0A0L0GAB9_9EUKA4.600e-3440.91Cupin type-1 domain-containing protein n=1 Tax=Sph... [more]
A0A815GW40_9BILA3.030e-3339.09Hypothetical protein n=1 Tax=Didymodactylos carnos... [more]
A0A0L0FUE8_9EUKA7.940e-3341.62Cupin type-1 domain-containing protein n=1 Tax=Sph... [more]
A0A836CHA5_9STRA1.020e-3140.91RmlC-like cupin domain-containing protein n=2 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Saccharina latissima female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001929GerminPRINTSPR00325GERMINcoord: 118..138
score: 36.54
coord: 151..166
score: 26.6
coord: 83..103
score: 30.45
IPR006045Cupin 1SMARTSM00835Cupin_1_3coord: 35..185
e-value: 6.7E-21
score: 85.4
IPR006045Cupin 1PFAMPF00190Cupin_1coord: 38..182
e-value: 6.7E-20
score: 71.2
IPR014710RmlC-like jelly roll foldGENE3D2.60.120.10coord: 21..190
e-value: 1.3E-35
score: 124.7
NoneNo IPR availablePANTHERPTHR31238FAMILY NOT NAMEDcoord: 26..163
NoneNo IPR availablePANTHERPTHR31238:SF14GERMIN-LIKE PROTEIN SUBFAMILY T MEMBER 1-RELATEDcoord: 26..163
IPR011051RmlC-like cupin domain superfamilySUPERFAMILY51182RmlC-like cupinscoord: 19..194

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig1077contigS-latissima_F_contig1077:121973..122902 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig1077.652.1mRNA_S-latissima_F_contig1077.652.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig1077 121973..122902 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig1077.652.1 ID=prot_S-latissima_F_contig1077.652.1|Name=mRNA_S-latissima_F_contig1077.652.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=211bp
AAGAPSRSLRLNDKGDVDVPRLDFRQQFDSEDFVFDLQGAEPEVEGEAGT
VKVANLGNVPVLSGEGVSYALVDIEPCGLNLPHHHPRAAEFGYIIKSESS
TSVRHAFVEENSGRLIMNDIGEGQVALVPGGLVHFVQNMGCSPATFLAAF
SSPDPGVLTTTTQGIAMLPEGTIQAALALGSDEAYAIIAGLPEGVVQGEK
ECLKRCGLDY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001929Germin
IPR006045Cupin_1
IPR014710RmlC-like_jellyroll
IPR011051RmlC_Cupin_sf