prot_S-latissima_F_contig1077.650.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig1077.650.1
Unique Nameprot_S-latissima_F_contig1077.650.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length191
Homology
BLAST of mRNA_S-latissima_F_contig1077.650.1 vs. uniprot
Match: D8LDW6_ECTSI (Cupin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDW6_ECTSI)

HSP 1 Score: 156 bits (394), Expect = 1.750e-44
Identity = 79/182 (43.41%), Postives = 110/182 (60.44%), Query Frame = 0
Query:    7 FDSEDFVFDLQGAEPEVEGEAGTVKVANLGNVPVLSGEGVSYALVEIEPCGLNLPHHHPRAAEFGYIVKSESSTSVRHAFIEENSGR-LIVNDIGEGQVALVPGGLVHFVQNMGCYPATFLAAFSSSDPGVLTTTTQGIAMLPEGTIQATLALDSDDANALIAGLPSGVVEGEKECLKRCDL 187
            F+ EDFVF L G EP+   +   ++ A LG +P L G+G++ ALV ++ C +NLPH HPRA E  Y++  E    +R AF+EEN G   +VND+ +G V   P GL+H+ QN+GC P TFLAA ++ DPG +T TT+    LP   IQA+L  +      LI  LP       ++CL+RC L
Sbjct:   37 FNPEDFVFTLGGPEPDAPVDGFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEMQYVINGEH---LRVAFVEENGGEGAVVNDLSQGDVTFFPQGLIHYEQNLGCEPVTFLAALNNDDPGAVTITTRFFE-LPSEAIQASLNFEDPALQRLIESLPDAPAAARRQCLERCGL 214          
BLAST of mRNA_S-latissima_F_contig1077.650.1 vs. uniprot
Match: A0A836CNU2_9STRA (RmlC-like cupin domain-containing protein n=7 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNU2_9STRA)

HSP 1 Score: 137 bits (346), Expect = 4.340e-37
Identity = 84/192 (43.75%), Postives = 108/192 (56.25%), Query Frame = 0
Query:    3 FRQQF-DSEDFVFDLQGAEPEVEGEAGTVKVANLGNVPVLSGEGVSYALVEIEPCGLNLPHHHPRAAEFGYIVKSESSTSVRHAFIEENSGRLIVNDIGEGQVALVPGGLVHFVQNMGCYPATFLAAFSSSDPGVLTTTT---QGIAM---LPEGTIQATLALDSDDANALIAGLPSGVVEGEKECLKRCDL 187
            FR QF D+ DF FDL G++       G+ +  +   +P L+GE V+   + +EPCG+NLPH HPRA E  Y+V + ++  V  AF+EEN GR I N I  G+ A  P GL H   NMGC PAT +AA  S D GV T TT   +G+A    L EG + A L +  D    LI G P G   G  EC +RC L
Sbjct:   51 FRAQFTDNTDFKFDLDGSKATTGNGGGSAQTLSAAQLPSLTGEKVAMVKLVLEPCGINLPHVHPRATEILYVVDA-AAEGVLTAFVEENGGRTIENTIVTGEAAFFPQGLTHVQVNMGCTPATMIAALGSDDFGVQTITTTALKGLAGADGLGEG-LAAALGISQDQLAVLIGGFPDGPAIGAAECRQRCGL 240          
BLAST of mRNA_S-latissima_F_contig1077.650.1 vs. uniprot
Match: A0A835YZF9_9STRA (RmlC-like cupin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZF9_9STRA)

HSP 1 Score: 134 bits (338), Expect = 1.660e-36
Identity = 82/191 (42.93%), Postives = 106/191 (55.50%), Query Frame = 0
Query:    4 RQQF-DSEDFVFDLQGAEPEVEGEAGTVKVANLGNVPVLSGEGVSYALVEIEPCGLNLPHHHPRAAEFGYIVKSESSTSVRHAFIEENSGRLIVNDIGEGQVALVPGGLVHFVQNMGCYPATFLAAFSSSDPGVLTTTT---QGIAM---LPEGTIQATLALDSDDANALIAGLPSGVVEGEKECLKRCDL 187
            R QF D+ DF FDL G+        G+ +  +   +P L+GE V+   + +EPCG+NLPH HPRA E  Y+V + ++  V  AF+EEN GR I N +  G+ A  P GL H   NMGC PAT +AA  S D GV T TT   +G+A    L EG + A L +  D    LI G P G   G  EC +RC L
Sbjct:    1 RAQFTDNTDFKFDLAGSTATAGNGGGSAQTLSAAQLPSLTGEKVAMVKLVLEPCGINLPHVHPRATEILYVVDA-AAEGVLTAFVEENGGRTIENTVVAGEAAFFPQGLTHMQVNMGCTPATMIAALGSDDFGVQTITTTALEGLAGAEGLGEG-LAAALGISQDQLAVLIGGFPDGPAIGAAECRQRCGL 189          
BLAST of mRNA_S-latissima_F_contig1077.650.1 vs. uniprot
Match: A0A507FDZ0_9FUNG (Cupin type-1 domain-containing protein n=2 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FDZ0_9FUNG)

HSP 1 Score: 135 bits (339), Expect = 5.670e-36
Identity = 74/183 (40.44%), Postives = 110/183 (60.11%), Query Frame = 0
Query:    5 QQFDSEDFVFDLQGAEPEVE-GEAGTVKVANLGNVPVLSGEGVSYALVEIEPCGLNLPHHHPRAAEFGYIVKSESSTSVRHAFIEENSGRLIVNDIGEGQVALVPGGLVHFVQNMGCYPATFLAAFSSSDPGVLTTTTQGIAMLPEGTIQATLALDSD-DANALIAGLPSGVVEGEKECLKRC 185
            +QF+ EDF+ DL       E G+ G++   NLG++P L+ +G++  L+ + PCG NLPH HPRA+E  Y+++     +V+  FIEEN  ++IVND+ +GQ   +P G +H+  N+GC  A  +AA ++ DPG LT   Q    LP+G I A+L    D +  AL   LP     G +ECL+RC
Sbjct:   43 KQFNHEDFITDLLHNPKSTEVGKGGSLAKMNLGSMPALARQGLAMVLINLNPCGANLPHVHPRASEAIYVIQG----NVQVGFIEENGAKVIVNDLVQGQATFIPQGSIHYQVNLGCEQAVMIAANNNEDPGTLTIPAQFF-KLPDGAIAASLGGTLDPEIRALNGSLPMNPAPGVEECLRRC 220          
BLAST of mRNA_S-latissima_F_contig1077.650.1 vs. uniprot
Match: A0A0L0FUE8_9EUKA (Cupin type-1 domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FUE8_9EUKA)

HSP 1 Score: 136 bits (342), Expect = 6.260e-36
Identity = 77/185 (41.62%), Postives = 101/185 (54.59%), Query Frame = 0
Query:    3 FRQQFDSEDFVFDLQGAEPEVEGEAGTVKVANLGNVPVLSGEGVSYALVEIEPCGLNLPHHHPRAAEFGYIVKSESSTSVRHAFIEENSGRLIVNDIGEGQVALVPGGLVHFVQNMGCYPATFLAAFSSSDPGVLTTTTQGIAMLPEGTIQATLALDSDDANALIAGLPSGVVEGEKECLKRCDL 187
            F   FD+EDFV D      E  G  GT + AN  NVPV+    ++     I PCG+NLPH HPR  E  YI++   +      F+ E  GRLI+ND+   Q    P GL+H+ QNM C PA F++  +SSDPG+L      +A LP   ++AT   D+   N L  GLP+G   G  ECL+RC L
Sbjct:  115 FLNNFDAEDFVIDFATQPLESTGLGGTSQPANRNNVPVIQASNMAQTRFRIAPCGINLPHVHPRGTESVYIIEGALTVG----FVTEG-GRLILNDVKTDQSTFFPQGLLHYQQNMACEPAGFISILNSSDPGLLVIPA-ALAELPSEALEATFDEDAAFVNQLRIGLPAGPARGRAECLRRCGL 293          
BLAST of mRNA_S-latissima_F_contig1077.650.1 vs. uniprot
Match: A0A835Z488_9STRA (RmlC-like cupin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z488_9STRA)

HSP 1 Score: 129 bits (325), Expect = 6.030e-34
Identity = 77/192 (40.10%), Postives = 107/192 (55.73%), Query Frame = 0
Query:    3 FRQQF-DSEDFVFDLQGAEPEVEGEAGTVKVANLGNVPVLSGEGVSYALVEIEPCGLNLPHHHPRAAEFGYIVKSESSTSVRHAFIEENSGRLIVNDIGEGQVALVPGGLVHFVQNMGCYPATFLAAFSSSDPGVLTTTT---QGIAM---LPEGTIQATLALDSDDANALIAGLPSGVVEGEKECLKRCDL 187
            FR QF ++EDF F++  ++       G+ +  +   +P L+GE V+   + ++PCG+NLPH HPRA E  Y++ + +   V  AF+EEN GR I N I  G+ A  P GL H   NMGC PAT +AA  S D GV T T+   +G+A    L EG + A L +  D    L+ G P G   G  EC +RC L
Sbjct:   52 FRAQFVNNEDFTFNIDASKATTGNGGGSAQTLSAAQLPSLTGEKVAMVKLVLQPCGINLPHVHPRATEILYVIDAPAE-GVLTAFVEENGGRTIENTIVTGEAAFFPQGLTHVQVNMGCAPATMIAALGSDDFGVQTITSAALKGLAAAEGLGEG-LAAALGIAQDQLALLVGGFPDGPAIGAAECRQRCGL 241          
BLAST of mRNA_S-latissima_F_contig1077.650.1 vs. uniprot
Match: A0A0G4EJ88_VITBC (Cupin type-1 domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EJ88_VITBC)

HSP 1 Score: 131 bits (330), Expect = 6.580e-34
Identity = 77/190 (40.53%), Postives = 103/190 (54.21%), Query Frame = 0
Query:    3 FRQQFD-SEDFVFDLQGAEPEVE--GEAGTVKVANLGNVPVLSGEGVSYALVEIEPCGLNLPHHHPRAAEFGYIVKSESSTSVRHAFIEENSGRLIVNDIGEGQVALVPGGLVHFVQNMGCYPATFLAAFSSSDPGVLTTTTQGIAMLPEGTIQATLALDSDDANALIAGLPSGVVEG--EKECLKRCDL 187
            FR QFD S DF+FD   A  E +  G+ G V  A++   P LSG G+S+ LV++ PC +N PH HPRA E  YI+K   S      F EEN GR++ ND+ EG  A  P  L+H+  N  C PA F+A  +S D GV T   Q    LP+  +   L +D  +   L   LP+G   G   +EC ++C L
Sbjct:  135 FRNQFDESSDFIFDFNTARAEADTNGQGGAVTGASVSQWPALSGHGLSHTLVDLAPCSINTPHVHPRATEIIYIIKGRVSVG----FAEENGGRIVTNDVKEGDTAFFPHTLIHWQFNPTCEPAQFIATLNSDDGGVQTIA-QAFFGLPDDVLATALGVDEYEVAVLREELPAGPALGLQREECRRKCGL 319          
BLAST of mRNA_S-latissima_F_contig1077.650.1 vs. uniprot
Match: A0A0L0FDT9_9EUKA (Cupin type-1 domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FDT9_9EUKA)

HSP 1 Score: 129 bits (324), Expect = 1.730e-33
Identity = 74/186 (39.78%), Postives = 100/186 (53.76%), Query Frame = 0
Query:    2 DFRQQFDSEDFVFDLQGAEPEVEGEAGTVKVANLGNVPVLSGEGVSYALVEIEPCGLNLPHHHPRAAEFGYIVKSESSTSVRHAFIEENSGRLIVNDIGEGQVALVPGGLVHFVQNMGCYPATFLAAFSSSDPGVLTTTTQGIAMLPEGTIQATLALDSDDANALIAGLPSGVVEGEKECLKRCDL 187
            DF   FD+ DFV D     P      GTV+ AN  NVPV+    +++    I PCG+NLPH HPR  E  YI++   +      F+ E SGRLI ND+   Q    P GL+H+ QNMGC PA +++    SD G+L  +   +  LP   ++AT   D++  N L+ GLP+G   G  EC  RC L
Sbjct:   87 DFLNNFDARDFVIDYSTL-PGATELGGTVQAANRNNVPVMQAAKMTHTRFHIAPCGINLPHIHPRGTESIYIIEGALTVG----FVTE-SGRLITNDVIVDQSTFFPRGLIHYQQNMGCEPAGYISMLDDSDAGLLVVSGV-LGNLPSEALEATFDEDAEFVNQLLMGLPTGPARGRAECFVRCGL 265          
BLAST of mRNA_S-latissima_F_contig1077.650.1 vs. uniprot
Match: A0A0L0GAB9_9EUKA (Cupin type-1 domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0GAB9_9EUKA)

HSP 1 Score: 127 bits (319), Expect = 1.910e-33
Identity = 77/193 (39.90%), Postives = 103/193 (53.37%), Query Frame = 0
Query:    1 LDFRQQFDSEDFVFDLQ----GAEPEVEGEAGTVKVANLGNVPVLSGEGVSYALVEIEPCGLNLPHHHPRAAEFGYIVKSESSTSVRHAFIEENSGRLIVNDIGEGQVALVPGGLVHFVQNMGCYPATFLAAFSSSDPGVLTTTTQGIAMLPEGTIQATLALDSDDANA--LIAGLPSGVVEGEKECLKRCDL 187
            L +   FD+EDFVFD      G   + +G  G+ + AN+   PV+    ++     I PCG+NLPH HPR  E  Y+++ E +      F+ E SGR ++NDI   Q    P GL+H+ QNMGC PA F++   SSDPG+L      +A LPE  I A  A D D+A    +  GLP     G  ECL RC L
Sbjct:   16 LRYMDNFDAEDFVFDFSDFETGVRVDSDGNGGSSQPANINTFPVVQVANMAQTRFRIAPCGINLPHVHPRGTESAYMIEGELTVG----FVME-SGRTVINDIKADQSTFFPQGLLHYQQNMGCEPAGFISILDSSDPGLLVIAA-AVAGLPEEAIAA--AFDEDEAFVAQMRMGLPKVPARGRAECLVRCGL 200          
BLAST of mRNA_S-latissima_F_contig1077.650.1 vs. uniprot
Match: A0A0L0FU70_9EUKA (Cupin type-1 domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FU70_9EUKA)

HSP 1 Score: 132 bits (331), Expect = 4.330e-33
Identity = 73/188 (38.83%), Postives = 102/188 (54.26%), Query Frame = 0
Query:    3 FRQQFDSEDFVFDLQGAEP---EVEGEAGTVKVANLGNVPVLSGEGVSYALVEIEPCGLNLPHHHPRAAEFGYIVKSESSTSVRHAFIEENSGRLIVNDIGEGQVALVPGGLVHFVQNMGCYPATFLAAFSSSDPGVLTTTTQGIAMLPEGTIQATLALDSDDANALIAGLPSGVVEGEKECLKRCDL 187
            F   FD+EDFVFD   +     +  G  GT++  ++   PV+    ++Y+   I PCG+NLPH HPR  E  Y++    +      F+ E SGRL++NDI + Q    P GL+H+ QNM C PA F++   + DPGVL  T + +  LP+  + AT   D +  N L  GLP G      ECLKRC L
Sbjct:  224 FLYNFDNEDFVFDFSDSNAVPVDSTGNGGTIQPVDIEGFPVMQLADMAYSRFSIGPCGINLPHLHPRGTESLYVIDGMLTVG----FVAE-SGRLVLNDIEKDQTTFFPKGLMHYQQNMQCVPANFISILDTCDPGVLVIT-ESLNALPDEALTATFGEDQEFINQLRLGLPDGPARARSECLKRCGL 405          
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig1077.650.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDW6_ECTSI1.750e-4443.41Cupin-like protein n=1 Tax=Ectocarpus siliculosus ... [more]
A0A836CNU2_9STRA4.340e-3743.75RmlC-like cupin domain-containing protein n=7 Tax=... [more]
A0A835YZF9_9STRA1.660e-3642.93RmlC-like cupin domain-containing protein n=1 Tax=... [more]
A0A507FDZ0_9FUNG5.670e-3640.44Cupin type-1 domain-containing protein n=2 Tax=Chy... [more]
A0A0L0FUE8_9EUKA6.260e-3641.62Cupin type-1 domain-containing protein n=1 Tax=Sph... [more]
A0A835Z488_9STRA6.030e-3440.10RmlC-like cupin domain-containing protein n=1 Tax=... [more]
A0A0G4EJ88_VITBC6.580e-3440.53Cupin type-1 domain-containing protein n=2 Tax=Vit... [more]
A0A0L0FDT9_9EUKA1.730e-3339.78Cupin type-1 domain-containing protein n=1 Tax=Sph... [more]
A0A0L0GAB9_9EUKA1.910e-3339.90Cupin type-1 domain-containing protein n=1 Tax=Sph... [more]
A0A0L0FU70_9EUKA4.330e-3338.83Cupin type-1 domain-containing protein n=1 Tax=Sph... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Saccharina latissima female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001929GerminPRINTSPR00325GERMINcoord: 62..82
score: 30.45
coord: 97..117
score: 36.54
coord: 130..145
score: 26.45
IPR006045Cupin 1SMARTSM00835Cupin_1_3coord: 14..164
e-value: 1.2E-19
score: 81.3
IPR006045Cupin 1PFAMPF00190Cupin_1coord: 17..161
e-value: 4.5E-19
score: 68.5
IPR014710RmlC-like jelly roll foldGENE3D2.60.120.10coord: 4..170
e-value: 3.8E-35
score: 123.2
NoneNo IPR availablePANTHERPTHR31238:SF14GERMIN-LIKE PROTEIN SUBFAMILY T MEMBER 1-RELATEDcoord: 6..149
NoneNo IPR availablePANTHERPTHR31238FAMILY NOT NAMEDcoord: 6..149
IPR011051RmlC-like cupin domain superfamilySUPERFAMILY51182RmlC-like cupinscoord: 6..173

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig1077contigS-latissima_F_contig1077:53228..54368 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig1077.650.1mRNA_S-latissima_F_contig1077.650.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig1077 53228..54368 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig1077.650.1 ID=prot_S-latissima_F_contig1077.650.1|Name=mRNA_S-latissima_F_contig1077.650.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=191bp
LDFRQQFDSEDFVFDLQGAEPEVEGEAGTVKVANLGNVPVLSGEGVSYAL
VEIEPCGLNLPHHHPRAAEFGYIVKSESSTSVRHAFIEENSGRLIVNDIG
EGQVALVPGGLVHFVQNMGCYPATFLAAFSSSDPGVLTTTTQGIAMLPEG
TIQATLALDSDDANALIAGLPSGVVEGEKECLKRCDLYHH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001929Germin
IPR006045Cupin_1
IPR014710RmlC-like_jellyroll
IPR011051RmlC_Cupin_sf