mRNA_S-latissima_F_contig1077.650.1 (mRNA) Saccharina latissima SLPER63f female
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Overview
Homology
BLAST of mRNA_S-latissima_F_contig1077.650.1 vs. uniprot
Match: D8LDW6_ECTSI (Cupin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDW6_ECTSI) HSP 1 Score: 156 bits (394), Expect = 1.750e-44 Identity = 79/182 (43.41%), Postives = 110/182 (60.44%), Query Frame = 1
Query: 19 FDSEDFVFDLQGAEPEVEGEAGTVKVANLGNVPVLSGEGVSYALVEIEPCGLNLPHHHPRAAEFGYIVKSESSTSVRHAFIEENSGR-LIVNDIGEGQVALVPGGLVHFVQNMGCYPATFLAAFSSSDPGVLTTTTQGIAMLPEGTIQATLALDSDDANALIAGLPSGVVEGEKECLKRCDL 561
F+ EDFVF L G EP+ + ++ A LG +P L G+G++ ALV ++ C +NLPH HPRA E Y++ E +R AF+EEN G +VND+ +G V P GL+H+ QN+GC P TFLAA ++ DPG +T TT+ LP IQA+L + LI LP ++CL+RC L
Sbjct: 37 FNPEDFVFTLGGPEPDAPVDGFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEMQYVINGEH---LRVAFVEENGGEGAVVNDLSQGDVTFFPQGLIHYEQNLGCEPVTFLAALNNDDPGAVTITTRFFE-LPSEAIQASLNFEDPALQRLIESLPDAPAAARRQCLERCGL 214
BLAST of mRNA_S-latissima_F_contig1077.650.1 vs. uniprot
Match: A0A836CNU2_9STRA (RmlC-like cupin domain-containing protein n=7 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNU2_9STRA) HSP 1 Score: 137 bits (346), Expect = 4.340e-37 Identity = 84/192 (43.75%), Postives = 108/192 (56.25%), Query Frame = 1
Query: 7 FRQQF-DSEDFVFDLQGAEPEVEGEAGTVKVANLGNVPVLSGEGVSYALVEIEPCGLNLPHHHPRAAEFGYIVKSESSTSVRHAFIEENSGRLIVNDIGEGQVALVPGGLVHFVQNMGCYPATFLAAFSSSDPGVLTTTT---QGIAM---LPEGTIQATLALDSDDANALIAGLPSGVVEGEKECLKRCDL 561
FR QF D+ DF FDL G++ G+ + + +P L+GE V+ + +EPCG+NLPH HPRA E Y+V + ++ V AF+EEN GR I N I G+ A P GL H NMGC PAT +AA S D GV T TT +G+A L EG + A L + D LI G P G G EC +RC L
Sbjct: 51 FRAQFTDNTDFKFDLDGSKATTGNGGGSAQTLSAAQLPSLTGEKVAMVKLVLEPCGINLPHVHPRATEILYVVDA-AAEGVLTAFVEENGGRTIENTIVTGEAAFFPQGLTHVQVNMGCTPATMIAALGSDDFGVQTITTTALKGLAGADGLGEG-LAAALGISQDQLAVLIGGFPDGPAIGAAECRQRCGL 240
BLAST of mRNA_S-latissima_F_contig1077.650.1 vs. uniprot
Match: A0A835YZF9_9STRA (RmlC-like cupin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZF9_9STRA) HSP 1 Score: 134 bits (338), Expect = 1.660e-36 Identity = 82/191 (42.93%), Postives = 106/191 (55.50%), Query Frame = 1
Query: 10 RQQF-DSEDFVFDLQGAEPEVEGEAGTVKVANLGNVPVLSGEGVSYALVEIEPCGLNLPHHHPRAAEFGYIVKSESSTSVRHAFIEENSGRLIVNDIGEGQVALVPGGLVHFVQNMGCYPATFLAAFSSSDPGVLTTTT---QGIAM---LPEGTIQATLALDSDDANALIAGLPSGVVEGEKECLKRCDL 561
R QF D+ DF FDL G+ G+ + + +P L+GE V+ + +EPCG+NLPH HPRA E Y+V + ++ V AF+EEN GR I N + G+ A P GL H NMGC PAT +AA S D GV T TT +G+A L EG + A L + D LI G P G G EC +RC L
Sbjct: 1 RAQFTDNTDFKFDLAGSTATAGNGGGSAQTLSAAQLPSLTGEKVAMVKLVLEPCGINLPHVHPRATEILYVVDA-AAEGVLTAFVEENGGRTIENTVVAGEAAFFPQGLTHMQVNMGCTPATMIAALGSDDFGVQTITTTALEGLAGAEGLGEG-LAAALGISQDQLAVLIGGFPDGPAIGAAECRQRCGL 189
BLAST of mRNA_S-latissima_F_contig1077.650.1 vs. uniprot
Match: A0A507FDZ0_9FUNG (Cupin type-1 domain-containing protein n=2 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FDZ0_9FUNG) HSP 1 Score: 135 bits (339), Expect = 5.670e-36 Identity = 74/183 (40.44%), Postives = 110/183 (60.11%), Query Frame = 1
Query: 13 QQFDSEDFVFDLQGAEPEVE-GEAGTVKVANLGNVPVLSGEGVSYALVEIEPCGLNLPHHHPRAAEFGYIVKSESSTSVRHAFIEENSGRLIVNDIGEGQVALVPGGLVHFVQNMGCYPATFLAAFSSSDPGVLTTTTQGIAMLPEGTIQATLALDSD-DANALIAGLPSGVVEGEKECLKRC 555
+QF+ EDF+ DL E G+ G++ NLG++P L+ +G++ L+ + PCG NLPH HPRA+E Y+++ +V+ FIEEN ++IVND+ +GQ +P G +H+ N+GC A +AA ++ DPG LT Q LP+G I A+L D + AL LP G +ECL+RC
Sbjct: 43 KQFNHEDFITDLLHNPKSTEVGKGGSLAKMNLGSMPALARQGLAMVLINLNPCGANLPHVHPRASEAIYVIQG----NVQVGFIEENGAKVIVNDLVQGQATFIPQGSIHYQVNLGCEQAVMIAANNNEDPGTLTIPAQFF-KLPDGAIAASLGGTLDPEIRALNGSLPMNPAPGVEECLRRC 220
BLAST of mRNA_S-latissima_F_contig1077.650.1 vs. uniprot
Match: A0A0L0FUE8_9EUKA (Cupin type-1 domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FUE8_9EUKA) HSP 1 Score: 136 bits (342), Expect = 6.260e-36 Identity = 77/185 (41.62%), Postives = 101/185 (54.59%), Query Frame = 1
Query: 7 FRQQFDSEDFVFDLQGAEPEVEGEAGTVKVANLGNVPVLSGEGVSYALVEIEPCGLNLPHHHPRAAEFGYIVKSESSTSVRHAFIEENSGRLIVNDIGEGQVALVPGGLVHFVQNMGCYPATFLAAFSSSDPGVLTTTTQGIAMLPEGTIQATLALDSDDANALIAGLPSGVVEGEKECLKRCDL 561
F FD+EDFV D E G GT + AN NVPV+ ++ I PCG+NLPH HPR E YI++ + F+ E GRLI+ND+ Q P GL+H+ QNM C PA F++ +SSDPG+L +A LP ++AT D+ N L GLP+G G ECL+RC L
Sbjct: 115 FLNNFDAEDFVIDFATQPLESTGLGGTSQPANRNNVPVIQASNMAQTRFRIAPCGINLPHVHPRGTESVYIIEGALTVG----FVTEG-GRLILNDVKTDQSTFFPQGLLHYQQNMACEPAGFISILNSSDPGLLVIPA-ALAELPSEALEATFDEDAAFVNQLRIGLPAGPARGRAECLRRCGL 293
BLAST of mRNA_S-latissima_F_contig1077.650.1 vs. uniprot
Match: A0A835Z488_9STRA (RmlC-like cupin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z488_9STRA) HSP 1 Score: 129 bits (325), Expect = 6.030e-34 Identity = 77/192 (40.10%), Postives = 107/192 (55.73%), Query Frame = 1
Query: 7 FRQQF-DSEDFVFDLQGAEPEVEGEAGTVKVANLGNVPVLSGEGVSYALVEIEPCGLNLPHHHPRAAEFGYIVKSESSTSVRHAFIEENSGRLIVNDIGEGQVALVPGGLVHFVQNMGCYPATFLAAFSSSDPGVLTTTT---QGIAM---LPEGTIQATLALDSDDANALIAGLPSGVVEGEKECLKRCDL 561
FR QF ++EDF F++ ++ G+ + + +P L+GE V+ + ++PCG+NLPH HPRA E Y++ + + V AF+EEN GR I N I G+ A P GL H NMGC PAT +AA S D GV T T+ +G+A L EG + A L + D L+ G P G G EC +RC L
Sbjct: 52 FRAQFVNNEDFTFNIDASKATTGNGGGSAQTLSAAQLPSLTGEKVAMVKLVLQPCGINLPHVHPRATEILYVIDAPAE-GVLTAFVEENGGRTIENTIVTGEAAFFPQGLTHVQVNMGCAPATMIAALGSDDFGVQTITSAALKGLAAAEGLGEG-LAAALGIAQDQLALLVGGFPDGPAIGAAECRQRCGL 241
BLAST of mRNA_S-latissima_F_contig1077.650.1 vs. uniprot
Match: A0A0G4EJ88_VITBC (Cupin type-1 domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EJ88_VITBC) HSP 1 Score: 131 bits (330), Expect = 6.580e-34 Identity = 77/190 (40.53%), Postives = 103/190 (54.21%), Query Frame = 1
Query: 7 FRQQFD-SEDFVFDLQGAEPEVE--GEAGTVKVANLGNVPVLSGEGVSYALVEIEPCGLNLPHHHPRAAEFGYIVKSESSTSVRHAFIEENSGRLIVNDIGEGQVALVPGGLVHFVQNMGCYPATFLAAFSSSDPGVLTTTTQGIAMLPEGTIQATLALDSDDANALIAGLPSGVVEG--EKECLKRCDL 561
FR QFD S DF+FD A E + G+ G V A++ P LSG G+S+ LV++ PC +N PH HPRA E YI+K S F EEN GR++ ND+ EG A P L+H+ N C PA F+A +S D GV T Q LP+ + L +D + L LP+G G +EC ++C L
Sbjct: 135 FRNQFDESSDFIFDFNTARAEADTNGQGGAVTGASVSQWPALSGHGLSHTLVDLAPCSINTPHVHPRATEIIYIIKGRVSVG----FAEENGGRIVTNDVKEGDTAFFPHTLIHWQFNPTCEPAQFIATLNSDDGGVQTIA-QAFFGLPDDVLATALGVDEYEVAVLREELPAGPALGLQREECRRKCGL 319
BLAST of mRNA_S-latissima_F_contig1077.650.1 vs. uniprot
Match: A0A0L0FDT9_9EUKA (Cupin type-1 domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FDT9_9EUKA) HSP 1 Score: 129 bits (324), Expect = 1.730e-33 Identity = 74/186 (39.78%), Postives = 100/186 (53.76%), Query Frame = 1
Query: 4 DFRQQFDSEDFVFDLQGAEPEVEGEAGTVKVANLGNVPVLSGEGVSYALVEIEPCGLNLPHHHPRAAEFGYIVKSESSTSVRHAFIEENSGRLIVNDIGEGQVALVPGGLVHFVQNMGCYPATFLAAFSSSDPGVLTTTTQGIAMLPEGTIQATLALDSDDANALIAGLPSGVVEGEKECLKRCDL 561
DF FD+ DFV D P GTV+ AN NVPV+ +++ I PCG+NLPH HPR E YI++ + F+ E SGRLI ND+ Q P GL+H+ QNMGC PA +++ SD G+L + + LP ++AT D++ N L+ GLP+G G EC RC L
Sbjct: 87 DFLNNFDARDFVIDYSTL-PGATELGGTVQAANRNNVPVMQAAKMTHTRFHIAPCGINLPHIHPRGTESIYIIEGALTVG----FVTE-SGRLITNDVIVDQSTFFPRGLIHYQQNMGCEPAGYISMLDDSDAGLLVVSGV-LGNLPSEALEATFDEDAEFVNQLLMGLPTGPARGRAECFVRCGL 265
BLAST of mRNA_S-latissima_F_contig1077.650.1 vs. uniprot
Match: A0A0L0GAB9_9EUKA (Cupin type-1 domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0GAB9_9EUKA) HSP 1 Score: 127 bits (319), Expect = 1.910e-33 Identity = 77/193 (39.90%), Postives = 103/193 (53.37%), Query Frame = 1
Query: 1 LDFRQQFDSEDFVFDLQ----GAEPEVEGEAGTVKVANLGNVPVLSGEGVSYALVEIEPCGLNLPHHHPRAAEFGYIVKSESSTSVRHAFIEENSGRLIVNDIGEGQVALVPGGLVHFVQNMGCYPATFLAAFSSSDPGVLTTTTQGIAMLPEGTIQATLALDSDDANA--LIAGLPSGVVEGEKECLKRCDL 561
L + FD+EDFVFD G + +G G+ + AN+ PV+ ++ I PCG+NLPH HPR E Y+++ E + F+ E SGR ++NDI Q P GL+H+ QNMGC PA F++ SSDPG+L +A LPE I A A D D+A + GLP G ECL RC L
Sbjct: 16 LRYMDNFDAEDFVFDFSDFETGVRVDSDGNGGSSQPANINTFPVVQVANMAQTRFRIAPCGINLPHVHPRGTESAYMIEGELTVG----FVME-SGRTVINDIKADQSTFFPQGLLHYQQNMGCEPAGFISILDSSDPGLLVIAA-AVAGLPEEAIAA--AFDEDEAFVAQMRMGLPKVPARGRAECLVRCGL 200
BLAST of mRNA_S-latissima_F_contig1077.650.1 vs. uniprot
Match: A0A0L0FU70_9EUKA (Cupin type-1 domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FU70_9EUKA) HSP 1 Score: 132 bits (331), Expect = 4.330e-33 Identity = 73/188 (38.83%), Postives = 102/188 (54.26%), Query Frame = 1
Query: 7 FRQQFDSEDFVFDLQGAEP---EVEGEAGTVKVANLGNVPVLSGEGVSYALVEIEPCGLNLPHHHPRAAEFGYIVKSESSTSVRHAFIEENSGRLIVNDIGEGQVALVPGGLVHFVQNMGCYPATFLAAFSSSDPGVLTTTTQGIAMLPEGTIQATLALDSDDANALIAGLPSGVVEGEKECLKRCDL 561
F FD+EDFVFD + + G GT++ ++ PV+ ++Y+ I PCG+NLPH HPR E Y++ + F+ E SGRL++NDI + Q P GL+H+ QNM C PA F++ + DPGVL T + + LP+ + AT D + N L GLP G ECLKRC L
Sbjct: 224 FLYNFDNEDFVFDFSDSNAVPVDSTGNGGTIQPVDIEGFPVMQLADMAYSRFSIGPCGINLPHLHPRGTESLYVIDGMLTVG----FVAE-SGRLVLNDIEKDQTTFFPKGLMHYQQNMQCVPANFISILDTCDPGVLVIT-ESLNALPDEALTATFGEDQEFINQLRLGLPDGPARARSECLKRCGL 405 The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig1077.650.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Saccharina latissima female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-latissima_F_contig1077.650.1 >prot_S-latissima_F_contig1077.650.1 ID=prot_S-latissima_F_contig1077.650.1|Name=mRNA_S-latissima_F_contig1077.650.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=191bp LDFRQQFDSEDFVFDLQGAEPEVEGEAGTVKVANLGNVPVLSGEGVSYALback to top mRNA from alignment at S-latissima_F_contig1077:53228..54368- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-latissima_F_contig1077.650.1 ID=mRNA_S-latissima_F_contig1077.650.1|Name=mRNA_S-latissima_F_contig1077.650.1|organism=Saccharina latissima SLPER63f female|type=mRNA|length=1141bp|location=Sequence derived from alignment at S-latissima_F_contig1077:53228..54368- (Saccharina latissima SLPER63f female)back to top Coding sequence (CDS) from alignment at S-latissima_F_contig1077:53228..54368- >mRNA_S-latissima_F_contig1077.650.1 ID=mRNA_S-latissima_F_contig1077.650.1|Name=mRNA_S-latissima_F_contig1077.650.1|organism=Saccharina latissima SLPER63f female|type=CDS|length=1146bp|location=Sequence derived from alignment at S-latissima_F_contig1077:53228..54368- (Saccharina latissima SLPER63f female)back to top |