prot_S-latissima_F_contig1063.541.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig1063.541.1
Unique Nameprot_S-latissima_F_contig1063.541.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length65
Homology
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BLAST of mRNA_S-latissima_F_contig1063.541.1 vs. uniprot
Match: D7FTA0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTA0_ECTSI)

HSP 1 Score: 77.4 bits (189), Expect = 4.430e-15
Identity = 41/53 (77.36%), Postives = 50/53 (94.34%), Query Frame = 0 
Query:    2 NEVRSLTIQLEEGKKEARWMRERNQELERVVEALRKTIMRQADLSSQRVEQQG 54
            ++VRSL++ +EE KKE+RW+RERNQELERVVEALRKTIMRQA+LSSQR +QQG
Sbjct:  423 HKVRSLSLLVEEAKKESRWLRERNQELERVVEALRKTIMRQAELSSQRQDQQG 475
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BLAST of mRNA_S-latissima_F_contig1063.541.1 vs. uniprot
Match: A0A6H5KMF9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMF9_9PHAE)

HSP 1 Score: 77.4 bits (189), Expect = 4.510e-15
Identity = 41/53 (77.36%), Postives = 50/53 (94.34%), Query Frame = 0 
Query:    2 NEVRSLTIQLEEGKKEARWMRERNQELERVVEALRKTIMRQADLSSQRVEQQG 54
            ++VRSL++ +EE KKE+RW+RERNQELERVVEALRKTIMRQA+LSSQR +QQG
Sbjct:  374 HKVRSLSLLVEEAKKESRWLRERNQELERVVEALRKTIMRQAELSSQRQDQQG 426
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BLAST of mRNA_S-latissima_F_contig1063.541.1 vs. uniprot
Match: A0A836CGJ9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGJ9_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 2.490e-10
Identity = 33/48 (68.75%), Postives = 43/48 (89.58%), Query Frame = 0 
Query:    2 NEVRSLTIQLEEGKKEARWMRERNQELERVVEALRKTIMRQADLSSQR 49
            +++RSL + LEE +KEARW+R+RN E ERV+EALRKTIMRQA+L+SQR
Sbjct:  307 DKLRSLAMLLEESRKEARWLRDRNGESERVIEALRKTIMRQAELNSQR 354
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BLAST of mRNA_S-latissima_F_contig1063.541.1 vs. uniprot
Match: A0A835YKF1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKF1_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 4.640e-10
Identity = 31/46 (67.39%), Postives = 40/46 (86.96%), Query Frame = 0 
Query:    4 VRSLTIQLEEGKKEARWMRERNQELERVVEALRKTIMRQADLSSQR 49
            +RSL + LEE +KEA+W+R+R  E ER++EALRKTIMRQA+LSSQR
Sbjct:  239 IRSLAVLLEESRKEAKWLRDRTSESERIIEALRKTIMRQAELSSQR 284
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig1063.541.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FTA0_ECTSI4.430e-1577.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KMF9_9PHAE4.510e-1577.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CGJ9_9STRA2.490e-1068.75Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YKF1_9STRA4.640e-1067.39Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Saccharina latissima female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 11..45

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig1063contigS-latissima_F_contig1063:145506..147016 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig1063.541.1mRNA_S-latissima_F_contig1063.541.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig1063 145506..147016 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig1063.541.1 ID=prot_S-latissima_F_contig1063.541.1|Name=mRNA_S-latissima_F_contig1063.541.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=65bp
KNEVRSLTIQLEEGKKEARWMRERNQELERVVEALRKTIMRQADLSSQRV
EQQGAAQRHSNSARE
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