prot_S-latissima_F_contig1035.324.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig1035.324.1
Unique Nameprot_S-latissima_F_contig1035.324.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length49
Homology
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BLAST of mRNA_S-latissima_F_contig1035.324.1 vs. uniprot
Match: D8LQI0_ECTSI (JmjC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQI0_ECTSI)

HSP 1 Score: 81.6 bits (200), Expect = 5.900e-17
Identity = 38/48 (79.17%), Postives = 41/48 (85.42%), Query Frame = 0 
Query:    2 ASLPRIDVTGLSPYQVAESVDFSRPCILTGVLPSADCEDWCDALMEDL 49
            ASLPRIDVTGLS  QVA+ VDFSRPCILTGVL S DCE WCD L++DL
Sbjct:   82 ASLPRIDVTGLSRAQVADLVDFSRPCILTGVLSSPDCESWCDGLLQDL 129
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig1035.324.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQI0_ECTSI5.900e-1779.17JmjC domain-containing protein n=2 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig1035contigS-latissima_F_contig1035:148809..148955 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig1035.324.1mRNA_S-latissima_F_contig1035.324.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig1035 148809..148957 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig1035.324.1 ID=prot_S-latissima_F_contig1035.324.1|Name=mRNA_S-latissima_F_contig1035.324.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=49bp
AASLPRIDVTGLSPYQVAESVDFSRPCILTGVLPSADCEDWCDALMEDL
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