prot_S-latissima_F_contig103.261.1 (polypeptide) Saccharina latissima SLPER63f female
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Overview
Homology
BLAST of mRNA_S-latissima_F_contig103.261.1 vs. uniprot
Match: A0A6H5L203_9PHAE (Mediator of RNA polymerase II transcription subunit 31 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L203_9PHAE) HSP 1 Score: 198 bits (503), Expect = 2.210e-63 Identity = 95/107 (88.79%), Postives = 101/107 (94.39%), Query Frame = 0
Query: 1 MEGVGTRFEVELELMNCLASPEYLHYLAQSGYLDDSAFLRFLEYLQYFKRPEYARFISYPHSLAMLDLLVNNPNFRKEIAHVSFRDFVHQQQFLHWQFGKR--PPQP 105
MEG GTRFE+ELELMNCLASPEYLHYLAQSGYLDD AF+RFLEYLQYFKRPEYA+FI+YPHSLAMLDLL+NNP FRKEIAHVSFRDFVHQQQFLHWQFGK PP+P
Sbjct: 1 MEGSGTRFEMELELMNCLASPEYLHYLAQSGYLDDRAFVRFLEYLQYFKRPEYAKFITYPHSLAMLDLLINNPPFRKEIAHVSFRDFVHQQQFLHWQFGKTAAPPRP 107
BLAST of mRNA_S-latissima_F_contig103.261.1 vs. uniprot
Match: D7FV80_ECTSI (Mediator of RNA polymerase II transcription subunit 31 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV80_ECTSI) HSP 1 Score: 144 bits (363), Expect = 3.260e-42 Identity = 68/77 (88.31%), Postives = 73/77 (94.81%), Query Frame = 0
Query: 1 MEGVGTRFEVELELMNCLASPEYLHYLAQSGYLDDSAFLRFLEYLQYFKRPEYARFISYPHSLAMLDLLVNNPNFRK 77
MEG GTRFE+ELELMNCLASPEYLHYLAQ GYLDD AF+RFLEYLQYFKRPEYA+FI+YPHSLAMLDLL+NNP FRK
Sbjct: 1 MEGSGTRFEMELELMNCLASPEYLHYLAQGGYLDDRAFIRFLEYLQYFKRPEYAKFITYPHSLAMLDLLINNPPFRK 77
BLAST of mRNA_S-latissima_F_contig103.261.1 vs. uniprot
Match: A0A835Z5G5_9STRA (Mediator of RNA polymerase II transcription subunit 31 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5G5_9STRA) HSP 1 Score: 138 bits (348), Expect = 1.340e-39 Identity = 65/103 (63.11%), Postives = 79/103 (76.70%), Query Frame = 0
Query: 2 EGVGT-RFEVELELMNCLASPEYLHYLAQSGYLDDSAFLRFLEYLQYFKRPEYARFISYPHSLAMLDLLVNNPNFRKEIAHVSFRDFVHQQQFLHWQFGKRPP 103
E VG RFEVELE + CLASPEYLH+LAQ Y DD AF+ FL+YL Y++RP+YA+++ YPH LAMLD L+N+ FR E+ SFRDFVHQQQF HWQ +R P
Sbjct: 19 EDVGAQRFEVELEFVQCLASPEYLHFLAQQRYFDDPAFMAFLQYLTYWRRPQYAKYLMYPHCLAMLDALLNSKRFRSELLMESFRDFVHQQQFFHWQHKRRDP 121
BLAST of mRNA_S-latissima_F_contig103.261.1 vs. uniprot
Match: A0A6U6IBL1_9STRA (Mediator of RNA polymerase II transcription subunit 31 n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6IBL1_9STRA) HSP 1 Score: 134 bits (336), Expect = 1.520e-37 Identity = 63/95 (66.32%), Postives = 76/95 (80.00%), Query Frame = 0
Query: 7 RFEVELELMNCLASPEYLHYLAQSGYLDDSAFLRFLEYLQYFKRPEYARFISYPHSLAMLDLLVNNPNFRKEIAHVSFRDFVHQQQFLHWQFGKR 101
RFE+ELE + CLASP YLH+LA SG L DS+FL FLEYL+Y+ RPEYARFI+YPH L LDLL N FR+E+A+V+FR+FVH+QQF WQF R
Sbjct: 33 RFELELEFVQCLASPAYLHHLATSGLLSDSSFLSFLEYLRYWSRPEYARFITYPHCLYFLDLLTTNETFRREMANVAFRNFVHEQQFYSWQFRSR 127
BLAST of mRNA_S-latissima_F_contig103.261.1 vs. uniprot
Match: A0A7S3XZ41_HETAK (Mediator of RNA polymerase II transcription subunit 31 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZ41_HETAK) HSP 1 Score: 129 bits (323), Expect = 1.840e-35 Identity = 59/97 (60.82%), Postives = 77/97 (79.38%), Query Frame = 0
Query: 1 MEGVGTRFEVELELMNCLASPEYLHYLAQSGYLDDSAFLRFLEYLQYFKRPEYARFISYPHSLAMLDLLVNNPNFRKEIAHVSFRDFVHQQQFLHWQ 97
++G +RFEVELE + CL+SPEYLHYLAQ+ Y +D AF+ FL YLQY++RPEYA+FI YPH LA +++L + FRKE+A F++FVHQQQF HWQ
Sbjct: 40 LDGGHSRFEVELEFVQCLSSPEYLHYLAQNKYFEDPAFINFLHYLQYWRRPEYAKFIIYPHCLAFMEMLEDEA-FRKELAKPGFKEFVHQQQFFHWQ 135
BLAST of mRNA_S-latissima_F_contig103.261.1 vs. uniprot
Match: A0A7S2XM67_9STRA (Mediator of RNA polymerase II transcription subunit 31 n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XM67_9STRA) HSP 1 Score: 121 bits (303), Expect = 1.350e-32 Identity = 55/92 (59.78%), Postives = 72/92 (78.26%), Query Frame = 0
Query: 7 RFEVELELMNCLASPEYLHYLAQSGYLDDSAFLRFLEYLQYFKRPEYARFISYPHSLAMLDLLVNNPNFRKEIAHVSFRDFVHQQQFLHWQF 98
RFE+ELE + LASP Y+H+LA SG L +F+ FL YLQY+KRPEYA++ISYPH LDLL++N FR+E+A+V FR+FVH+QQF WQ+
Sbjct: 28 RFELELEFLQSLASPAYVHHLATSGILQSPSFIAFLRYLQYWKRPEYAKYISYPHCFFFLDLLIHNEPFRREMANVGFRNFVHEQQFYSWQY 119
BLAST of mRNA_S-latissima_F_contig103.261.1 vs. uniprot
Match: A0A7S2EVA4_TRICV (Mediator of RNA polymerase II transcription subunit 31 (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EVA4_TRICV) HSP 1 Score: 119 bits (298), Expect = 7.490e-32 Identity = 55/91 (60.44%), Postives = 70/91 (76.92%), Query Frame = 0
Query: 7 RFEVELELMNCLASPEYLHYLAQSGYLDDSAFLRFLEYLQYFKRPEYARFISYPHSLAMLDLLVNNPNFRKEIAHVSFRDFVHQQQFLHWQ 97
RFE+ELE + CLASP Y+H+LA SG L D +FL FL YL+Y+ PEYARF+ YPH L LDLL + FR+E+A+V+FR+FVH+QQF WQ
Sbjct: 39 RFELELEFVQCLASPAYMHHLATSGLLSDPSFLSFLRYLRYWSHPEYARFLVYPHCLYFLDLLCESEGFRREMANVAFRNFVHEQQFYGWQ 129
BLAST of mRNA_S-latissima_F_contig103.261.1 vs. uniprot
Match: A0A7S3QJ33_9STRA (Mediator of RNA polymerase II transcription subunit 31 n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QJ33_9STRA) HSP 1 Score: 116 bits (291), Expect = 5.540e-30 Identity = 55/96 (57.29%), Postives = 71/96 (73.96%), Query Frame = 0
Query: 7 RFEVELELMNCLASPEYLHYLAQSGYLDDSAFLRFLEYLQ-YFKRPEYARFISYPHSLAMLDLLVNNPNFRKEIAHVSFRDFVHQQQFLHWQFGKR 101
RFE+ELE + LASP YLH+LA GY D AFL +L YL+ Y+ RPEYA++I+YPH L LDL + FRKEI+ V FR+FVH+QQF++WQ+ R
Sbjct: 77 RFELELEFVQSLASPAYLHHLATQGYFQDEAFLTYLRYLRSYWTRPEYAKYITYPHCLFFLDLAIEKEAFRKEISQVGFRNFVHEQQFMNWQYRSR 172
BLAST of mRNA_S-latissima_F_contig103.261.1 vs. uniprot
Match: A0A6V2LYR4_9STRA (Mediator of RNA polymerase II transcription subunit 31 n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2LYR4_9STRA) HSP 1 Score: 113 bits (282), Expect = 5.830e-29 Identity = 52/92 (56.52%), Postives = 66/92 (71.74%), Query Frame = 0
Query: 7 RFEVELELMNCLASPEYLHYLAQSGYLDDSAFLRFLEYLQYFKRPEYARFISYPHSLAMLDLLVNNPNFRKEIAHVSFRDFVHQQQFLHWQF 98
RFE+ELE + CLASP YLH+LA+S L +FL + Y+KRPEY RFI YPH L LDL++ N FR+E+ +V FR+FVH+QQF WQF
Sbjct: 50 RFELELEFIQCLASPAYLHHLAESNVLSSPSFLSYXXXXXYWKRPEYVRFIIYPHCLYFLDLILENETFRREMGNVGFRNFVHEQQFYSWQF 141
BLAST of mRNA_S-latissima_F_contig103.261.1 vs. uniprot
Match: A0A2P6TGR1_CHLSO (Mediator of RNA polymerase II transcription subunit 31 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TGR1_CHLSO) HSP 1 Score: 110 bits (275), Expect = 1.960e-28 Identity = 50/94 (53.19%), Postives = 73/94 (77.66%), Query Frame = 0
Query: 7 RFEVELELMNCLASPEYLHYLAQSGYLDDSAFLRFLEYLQYFKRPEYARFISYPHSLAMLDLLVNNPNFRKEIAHVSFRDFVHQQQFLHWQFGK 100
RFE+ELE ++CLA+P YL++LAQ+ Y +D AFL +L+YL Y+++P+YARFI YPH+L LDLL P FR +IA+ ++++ VH QQF WQ+ +
Sbjct: 22 RFELELEFLHCLANPGYLNWLAQNRYFEDEAFLEYLKYLLYWRQPQYARFIVYPHALYFLDLL-QTPEFRAKIANPAYKEMVHTQQFFFWQYAR 114 The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig103.261.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0 of Saccharina latissima female
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_S-latissima_F_contig103.261.1 ID=prot_S-latissima_F_contig103.261.1|Name=mRNA_S-latissima_F_contig103.261.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=129bpback to top |