prot_S-latissima_F_contig1022.200.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig1022.200.1
Unique Nameprot_S-latissima_F_contig1022.200.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length707
Homology
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BLAST of mRNA_S-latissima_F_contig1022.200.1 vs. uniprot
Match: A0A6H5KTC0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTC0_9PHAE)

HSP 1 Score: 194 bits (494), Expect = 1.310e-49
Identity = 242/591 (40.95%), Postives = 277/591 (46.87%), Query Frame = 0 
Query:    1 MHIACQTGDMRLVQRLLELGADIITADKAGNTPLHYASKGGYTEMVKMLVGQGAAVEKRNGSRLTAYDVATDHVVRQYLLPLQLRAEAGNPDYAVHTMGITSDT-PRNYEQYGVPGQPNALHGQPHGAHTAAS------AGPDRMSTALGALMQAPTFDP--PRPGAAGMAPPT-------------VYPGGAGGAPPMQR-GSNSPPLPGSSGVGFADPSAALPPPPAMGMGALPXXXXXXXXXXXXXXXXXPVKFXXXXXA-----------ASGAAPPALPSTTAPVSSXXXXXXXXXXXXXXXXXPGDVSSQAQSSSPVVAAANFSPEIAGRTFPGTGSQVESPXXXXXXXXXXXXXXXXXXXXAMMEPVSTGLYFPEEETPASTESVTVAGGAREATPPNSGVSTAVGGQPFSVVPVHVQQEEPDATEESLRPGS-----ASVLGGD----PVMTNVDLSSTFQGQATISGG-------EGSFQAGGMGAALPPPXXAHPSSAPS--SGRGAPPPS--RPPGAYTPGPGPHQPASEQPGK-FKPIKPDGFHSSASDKALQRRYGHTKIVRDMGAPPTAAQLGGPQG 536
            MH+ACQTG+  LVQRLLELGADII                             A VE+RN  RLTAYDVATDHV+RQ+LLPLQL+AEAGNPDYAV+TMGITSD  PR+YE +GVPG  +                     G   M  ALGALMQAPT  P  PRPGA    PP              VYP G  G P  Q+ GS SPP  G     +  P  A PP      G+LP XXXXXXXXXXXXXXXX    XXXXX            A G    A P+                         GD++      +   AAA   P    R+FPG   Q+ + XXXXXXXXXXXX                        +PA+                         G+ FS          P   +ESLRPG+     +S   GD    P+M+ VDLSS FQ Q  +SG        EGSF  G      P  XX    S P+  +   APPPS                P +EQ GK FK IKPDGFHSSASDK LQ RYGHTKIV++ GAPPTAAQLGG +G
Sbjct:   58 MHMACQTGNNHLVQRLLELGADIIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPVEQRNSYRLTAYDVATDHVIRQFLLPLQLKAEAGNPDYAVNTMGITSDAAPRSYEHHGVPGMGSXXXXXXXXXXXXXXXXXXXXGGASSMDAALGALMQAPTMVPLAPRPGAGMAGPPPMXXXXXXXXXXXXVYPPGPAGFPGAQQPGSYSPPGEGXXXXXYPAPPGASPP---AATGSLPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEGKTEVASPAPK-----------------------GDLAGTGPPDAAAAAAATGGP----RSFPGVAVQLAAXXXXXXXXXXXXX------------------------SPAAAPKA---------------------GEDFS--------GRPPFEDESLRPGAEAKANSSSSPGDGPSSPLMSTVDLSSKFQAQVAVSGAGAGAAAVEGSFVGGXXXXXXPVXXXXXHGSEPNCATAGAAPPPSVXXXXXXXXXXXXXXXPPAEQTGKKFKLIKPDGFHSSASDKVLQARYGHTKIVKEFGAPPTAAQLGGAKG 565
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BLAST of mRNA_S-latissima_F_contig1022.200.1 vs. uniprot
Match: D7FP01_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP01_ECTSI)

HSP 1 Score: 92.0 bits (227), Expect = 4.500e-18
Identity = 49/85 (57.65%), Postives = 55/85 (64.71%), Query Frame = 0 
Query:    1 MHIACQTGDMRLVQRLLELGADIITADKAGNTPLHYASKGGYTEMVKMLVGQGAAVEKRNGSRLTAYDVATDHVVRQYLLPLQLR 85
            MH+ACQTG+  LVQRLLELGADIIT                          QGAAVE+RN  RLTAYDVATDHV+RQ+LLPLQL+
Sbjct:   58 MHMACQTGNNHLVQRLLELGADIITXXXXXXXXXXXXXXXXXXXXXXXXXXQGAAVEQRNSHRLTAYDVATDHVIRQFLLPLQLK 142
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BLAST of mRNA_S-latissima_F_contig1022.200.1 vs. uniprot
Match: W7TGZ7_9STRA (Serine threonine-protein phosphatase 6 regulatory n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TGZ7_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 4.760e-18
Identity = 53/107 (49.53%), Postives = 68/107 (63.55%), Query Frame = 0 
Query:    1 MHIACQTGDMRLVQRLLELGADIITA-DKAGNTPLHYASKGGYTEMVKMLVGQGAAVEKRNGSRLTAYDVATDHVVRQYLLPLQLRAE---AGNPDYAVHTMGITSD 103
            +H ACQ G+  ++ +L+E+GAD  +A D+ GN  LH A+KGG  E VK L+  G  V +RN  R TAYDVA  H+VRQ+LLPLQLRAE   A     AVH   +  D
Sbjct:   80 IHTACQAGNQTMIDKLMEMGADARSATDRHGNGTLHAAAKGGKLETVKFLLAHGLDVSRRNAYRQTAYDVAESHIVRQFLLPLQLRAEPEPAAGSLAAVHNPDVIRD 186
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BLAST of mRNA_S-latissima_F_contig1022.200.1 vs. uniprot
Match: A0A4D9DC57_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DC57_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 6.150e-18
Identity = 52/107 (48.60%), Postives = 68/107 (63.55%), Query Frame = 0 
Query:    1 MHIACQTGDMRLVQRLLELGADIITA-DKAGNTPLHYASKGGYTEMVKMLVGQGAAVEKRNGSRLTAYDVATDHVVRQYLLPLQLRAE---AGNPDYAVHTMGITSD 103
            +H ACQ G+  ++ +L+E+GAD+ +A D+ GN  LH A+KGG  E VK L+  G  V +RN  R TAYDVA  H+VRQ+LLPLQLR E   A     AVH   +  D
Sbjct:   59 IHTACQAGNQMMIDKLMEMGADVRSATDRHGNGTLHAAAKGGKLETVKFLLAHGLDVSRRNAYRQTAYDVAESHIVRQFLLPLQLRTEPEPAAGTLAAVHNPDVIRD 165
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BLAST of mRNA_S-latissima_F_contig1022.200.1 vs. uniprot
Match: A0A7S3JRB0_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JRB0_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 3.690e-12
Identity = 41/89 (46.07%), Postives = 61/89 (68.54%), Query Frame = 0 
Query:    1 MHIACQTGDMRLVQRLLELGADIITAD-KAGNTPLHYASKGGYTEMVKMLVGQGAAVEKRNGSRLTAYDVATDHVVRQYLLPLQLRAEA 88
            +H+AC    ++ V+ LL  GAD+   D +A  TPLH+ ++GG++ + ++LV +GA++  RN    T YDVA D  +RQ+LLPLQLRAEA
Sbjct:   65 LHVACAEDFVQCVEYLLVNGADVNVRDTRAHETPLHHGARGGHSRVCRLLVERGASLVARNARNQTPYDVAKDLSLRQWLLPLQLRAEA 153
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BLAST of mRNA_S-latissima_F_contig1022.200.1 vs. uniprot
Match: A0A835YRJ6_9STRA (Ankyrin repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRJ6_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 4.290e-12
Identity = 41/94 (43.62%), Postives = 51/94 (54.26%), Query Frame = 0 
Query:    1 MHIACQTGDMRLVQRLLELGADIITADKAGNTPLHYASKGGYTEMVKMLVGQGAAVEKRNGSRLTAYDVATDHVVRQYLLPLQLRAEAGNPDYA 94
            +H+ACQ G   L++RL ELG D+  AD                            V+ RN SR + YD+AT+HVVRQYLLPLQL+AEA NP  A
Sbjct:   58 VHMACQAGLQELLRRLAELGGDLAGADNXXXXXXXXXXXXXXXXXXXXXXXXXXXVDARNASRQSPYDLATNHVVRQYLLPLQLKAEASNPSSA 151
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BLAST of mRNA_S-latissima_F_contig1022.200.1 vs. uniprot
Match: A0A7R9U2B4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U2B4_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 6.100e-11
Identity = 42/90 (46.67%), Postives = 51/90 (56.67%), Query Frame = 0 
Query:   30 GNTPLHYASKGGYTEMVKMLVGQGAAVEKRNGSRLTAYDVATDHVVRQYLLPLQLRAEAGNPDYAVHTMGITSDTPRNYEQYGVPGQPNA 119
            GNTPLHYA +GG  +MVK ++G+   V  RNG+  T YD A  HVVRQYLLP+QLR E          + +   TP  Y  Y V   P A
Sbjct:   87 GNTPLHYACEGGSLDMVKHILGKQVDVLARNGANQTPYDCAESHVVRQYLLPIQLRVENERGIGVDAGLSMLISTPAAYGHYDVMPPPGA 176
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BLAST of mRNA_S-latissima_F_contig1022.200.1 vs. uniprot
Match: A0A6B2LVI1_9EUKA (Uncharacterized protein (Fragment) n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LVI1_9EUKA)

HSP 1 Score: 56.2 bits (134), Expect = 1.740e-6
Identity = 24/56 (42.86%), Postives = 38/56 (67.86%), Query Frame = 0 
Query:    1 MHIACQTGDMRLVQRLLELGADIITADKAGNTPLHYASKGGYTEMVKMLVGQGAAV 56
            +HI+  TG +R    L+E G  +   D AGNTP+H+A+K GY+E++K+L   GA++
Sbjct:   16 LHISSLTGSVRCTSFLIECGLSVNAQDYAGNTPIHFAAKEGYSEIIKLLFYNGASL 71
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig1022.200.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5KTC0_9PHAE1.310e-4940.95Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D7FP01_ECTSI4.500e-1857.65Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
W7TGZ7_9STRA4.760e-1849.53Serine threonine-protein phosphatase 6 regulatory ... [more]
A0A4D9DC57_9STRA6.150e-1848.60Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S3JRB0_9STRA3.690e-1246.07Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A835YRJ6_9STRA4.290e-1243.62Ankyrin repeat-containing domain protein n=1 Tax=T... [more]
A0A7R9U2B4_9STRA6.100e-1146.67Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A6B2LVI1_9EUKA1.740e-642.86Uncharacterized protein (Fragment) n=1 Tax=Arcella... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Saccharina latissima female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 29..58
e-value: 1.1E-4
score: 31.6
coord: 1..26
e-value: 2000.0
score: 2.8
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 29..61
score: 13.304
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 1..28
score: 11.487
NoneNo IPR availablePFAMPF13637Ank_4coord: 1..50
e-value: 5.8E-11
score: 42.7
NoneNo IPR availablePANTHERPTHR24180FAMILY NOT NAMEDcoord: 1..72
NoneNo IPR availablePANTHERPTHR24180:SF1526S PROTEASOME REGULATORY SUBUNIT P28-RELATEDcoord: 1..72
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..80
e-value: 1.0E-19
score: 72.6
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 1..72
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..70
score: 23.312

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig1022contigS-latissima_F_contig1022:17634..21886 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig1022.200.1mRNA_S-latissima_F_contig1022.200.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig1022 10234..23133 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig1022.200.1 ID=prot_S-latissima_F_contig1022.200.1|Name=mRNA_S-latissima_F_contig1022.200.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=707bp
MHIACQTGDMRLVQRLLELGADIITADKAGNTPLHYASKGGYTEMVKMLV
GQGAAVEKRNGSRLTAYDVATDHVVRQYLLPLQLRAEAGNPDYAVHTMGI
TSDTPRNYEQYGVPGQPNALHGQPHGAHTAASAGPDRMSTALGALMQAPT
FDPPRPGAAGMAPPTVYPGGAGGAPPMQRGSNSPPLPGSSGVGFADPSAA
LPPPPAMGMGALPPAAPTAPGPSVPALGSAPVKFAGPTAAASGAAPPALP
STTAPVSSGPTASAEGRGGSVTPTRPGDVSSQAQSSSPVVAAANFSPEIA
GRTFPGTGSQVESPPPPPAGSPRSGTGGGAVSSSAMMEPVSTGLYFPEEE
TPASTESVTVAGGAREATPPNSGVSTAVGGQPFSVVPVHVQQEEPDATEE
SLRPGSASVLGGDPVMTNVDLSSTFQGQATISGGEGSFQAGGMGAALPPP
PPAHPSSAPSSGRGAPPPSRPPGAYTPGPGPHQPASEQPGKFKPIKPDGF
HSSASDKALQRRYGHTKIVRDMGAPPTAAQLGGPQGPAGGGASYPPPMGG
PPPMAMAGPPPMAGPPPMAGQSSDGYAQAQARPQYASPQAGYYGQPYGGA
GAMQPSFGQQPFAQPPPPPAANQQSAMPAYPRPPPNMNGGVGEGRGSLPS
PGGYAYKPAGMGSAALPSTASQENESRGGRGRGGYNVFNPSTDRVVAADS
TSNAVL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom