prot_S-latissima_F_contig1005.66.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig1005.66.1
Unique Nameprot_S-latissima_F_contig1005.66.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length79
Homology
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BLAST of mRNA_S-latissima_F_contig1005.66.1 vs. uniprot
Match: D7G5J3_ECTSI (PPIase cyclophilin-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5J3_ECTSI)

HSP 1 Score: 95.9 bits (237), Expect = 1.460e-21
Identity = 49/63 (77.78%), Postives = 56/63 (88.89%), Query Frame = 0 
Query:    4 QATIAGCGLVKRNSAAMETESSGWGGEDSGDGFRADAMRGMRADVREEKAGVSRAVGRSLKAS 66
            +A IAGCGLVKRNSAAMETE +GWGG DSG+ FRA+AMRG+RADVREEKA VSRAVG + K+S
Sbjct:  342 KAVIAGCGLVKRNSAAMETEGAGWGGADSGNSFRANAMRGVRADVREEKAAVSRAVGNAFKSS 404
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig1005.66.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G5J3_ECTSI1.460e-2177.78PPIase cyclophilin-type domain-containing protein ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig1005contigS-latissima_F_contig1005:161634..161870 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig1005.66.1mRNA_S-latissima_F_contig1005.66.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig1005 161631..162144 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig1005.66.1 ID=prot_S-latissima_F_contig1005.66.1|Name=mRNA_S-latissima_F_contig1005.66.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=79bp
MKMQATIAGCGLVKRNSAAMETESSGWGGEDSGDGFRADAMRGMRADVRE
EKAGVSRAVGRSLKASSSSGGSGRESDQ*
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