prot_S-latissima_F_contig1004.57.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig1004.57.1
Unique Nameprot_S-latissima_F_contig1004.57.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length252
Homology
BLAST of mRNA_S-latissima_F_contig1004.57.1 vs. uniprot
Match: D8LJI4_ECTSI (CAP-Gly domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJI4_ECTSI)

HSP 1 Score: 305 bits (782), Expect = 4.620e-95
Identity = 157/220 (71.36%), Postives = 180/220 (81.82%), Query Frame = 0
Query:    7 AGGLEGVAQSLAHEVVSNPDDWEKRRTALISMQQAVDAVGKS-----GQGGPTVFTADLWRHLKEPLKHTLNDLRSAIVKEACLLLEKLSTTAANSMAALMRDMLNVLLQLMANGNSVIVGQVDSCMRHVISNTRFPRQLKEMEYTVKNSRSNNLRESVASYVLLMLGTWPAPSMEKEVVHLESIISLLLKDASSGARTDARACFAIFNNHWPKRADRIL 221
            AG LE  A SLA EV  NPDDWE+RR AL SMQQA D  GK+     G G   VFTA++WR+L+EPLKHTLNDLRSAIVKEAC+LLEKLS  A N MAALMRDMLNVLLQL+ANGNSVIVGQVDSCMRH+I ++RFPRQLKE+EYTV+NSRS +LRESV +YVLLML  WP  SM+KE  +LESII+LLL+DA+S ARTDARA F +   HWPKRAD++L
Sbjct:    7 AGTLEAAALSLAQEVSGNPDDWERRRKALYSMQQAADDAGKALSAAGGGGEKAVFTAEVWRYLREPLKHTLNDLRSAIVKEACVLLEKLSDAAGNYMAALMRDMLNVLLQLLANGNSVIVGQVDSCMRHIIEHSRFPRQLKEVEYTVRNSRSKDLRESVGAYVLLMLRAWPPASMDKEAGYLESIIALLLRDAASAARTDARASFGMLMEHWPKRADKVL 226          
BLAST of mRNA_S-latissima_F_contig1004.57.1 vs. uniprot
Match: A0A6H5KBA3_9PHAE (CAP-Gly domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBA3_9PHAE)

HSP 1 Score: 263 bits (672), Expect = 2.950e-79
Identity = 137/187 (73.26%), Postives = 154/187 (82.35%), Query Frame = 0
Query:    8 GGLEGVAQSLAHEVVSNPDDWEKRRTALISMQQAVDAVGK-----SGQGGPTVFTADLWRHLKEPLKHTLNDLRSAIVKEACLLLEKLSTTAANSMAALMRDMLNVLLQLMANGNSVIVGQVDSCMRHVISNTRFPRQLKEMEYTVKNSRSNNLRESVASYVLLMLGTWPAPSMEKEVVHLESIISL 189
            G LE  A SLA EV  NPDDWE+RR AL SMQQAVD  GK     SG G   VFTA++WR+L+EPLKHTLNDLRSAIVKEAC+LLEKLS  A N MAALMRDMLNVLLQL+ANGNSVIVGQVDSCMRH+I ++RFPRQLKE+EYTV+NSRS +LRESV +YVLLML  WP  SM+KE  HLESII++
Sbjct:    8 GTLEAAALSLAQEVSGNPDDWERRRKALYSMQQAVDDAGKALSAASGGGEKAVFTAEVWRYLREPLKHTLNDLRSAIVKEACVLLEKLSDAAGNYMAALMRDMLNVLLQLLANGNSVIVGQVDSCMRHIIEHSRFPRQLKEVEYTVRNSRSKDLRESVGAYVLLMLRAWPPASMDKEAGHLESIIAV 194          
BLAST of mRNA_S-latissima_F_contig1004.57.1 vs. uniprot
Match: UPI00096B5BFF (LOW QUALITY PROTEIN: CLIP-associating protein n=1 Tax=Aethina tumida TaxID=116153 RepID=UPI00096B5BFF)

HSP 1 Score: 102 bits (254), Expect = 4.800e-21
Identity = 64/208 (30.77%), Postives = 107/208 (51.44%), Query Frame = 0
Query:   20 EVVSNPD-DWEKRRTALISMQQAVDAVGKSGQGGPTVFTADLWRHLKEPLKHTLNDLRSAIVKEACLLLEKLSTTAANSMAALMRDMLNVLLQLMANGNSVIVGQVDSCMRHVISNTRFPRQLKEMEYTVKNSRSNNLRESVASYVLLMLGTWPAPSMEKEVVHLESIISLLLKDASSGARTDARACFAIFNNHWPKRADRILAAAEP 226
            +++S+P+ DW KR  AL  ++  V A    G      F   L + L+ PL+ T+ DLRS +V+EAC+ +  L+    N        +L  L+ L+ N   V+       +R +I NT  PR ++ +      S+S ++R S   ++ LML TWP   +E+ V  L+  +   + DA S AR  +R  F  F +H+P+ A+ +L + +P
Sbjct:  330 DIISDPNKDWNKRADALKKIRSLVMA----GATNYDEFHTGL-KSLEIPLQGTIKDLRSQVVREACITIAFLALKLGNKFDKAAELLLQPLINLIQNSAKVMATAGQVTVRFIIQNTHSPRLIQPITSNAMTSKSKDIRRSCCEFIELMLTTWPTHPLERHVAALQEAVKKGIADADSEARVISRRAFKGFKDHFPENAEVLLQSLDP 532          
BLAST of mRNA_S-latissima_F_contig1004.57.1 vs. uniprot
Match: A0A2A4K157_HELVI (Uncharacterized protein n=16 Tax=Noctuidae TaxID=7100 RepID=A0A2A4K157_HELVI)

HSP 1 Score: 99.8 bits (247), Expect = 4.070e-20
Identity = 61/214 (28.50%), Postives = 107/214 (50.00%), Query Frame = 0
Query:    9 GLEGVAQSLAHEVVSNPDDWEKRRTALISMQQAVDAVGKSGQGGPTVFTADLWRHLKEPLKHTLNDLRSAIVKEACLLLEKLSTTAANSMAALMRDMLNVLLQLMANGNSVIVGQVDSCMRHVISNTRFPRQLKEMEYTVKNSRSNNLRESVASYVLLMLGTWPAPSMEKEVVHLESIISLLLKDASSGARTDARACFAIFNNHWPKRADRILA 222
            GL+ + +  A  +     DWEKR  AL  ++  + A   + Q  PT F A L + L  P    + DLRS +V+EAC+ +  ++    N +      +L  L+ L+ N   V+      C+R+++S    PR L  +   +  ++S  +R +++  ++LML  WPA ++EK+   +   I     DA S  RT  R  +A +  H+P+ A+++ A
Sbjct:  344 GLDDLCRHAAALLGDRAADWEKRVDALKKIRSLLTA--NAHQQYPTEFAAHL-KDLSVPFLVVIKDLRSQVVREACITIAHMAKVLRNKIDQFSLYILQELINLIQNAAKVVSSAGTVCVRYIVSYVHSPRLLPVIVTNLTTNKSKEIRSTLSEVLVLMLEKWPAQTIEKQQAAVRDAIRRACVDADSTCRTYGRRAYAAYKRHFPEDAEQLFA 554          
BLAST of mRNA_S-latissima_F_contig1004.57.1 vs. uniprot
Match: A0A2D4C9E0_PYTIN (CAP-Gly domain-containing protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C9E0_PYTIN)

HSP 1 Score: 96.3 bits (238), Expect = 4.210e-19
Identity = 70/212 (33.02%), Postives = 110/212 (51.89%), Query Frame = 0
Query:   11 EGVAQSLA---HEVVSNPDDWEKRRTALISMQQAVDAVGKSGQGGPTVFTADLWRHLKEPLKHTLNDLRSAIVKEACLLLEKLSTTAANSMAALMRDMLNVLLQLMANGNSVIVGQVDSCMRHVISNT--RFPRQLKEMEYTVKNSRSNNLRESVASYVLLMLGTWPAPSMEKEVVHLESIISLLLKDASSGARTDARACFAIFNNHWPKRA 217
            + +A +LA     +  N D+W +R  AL+ ++Q  +A+  +   G  V  A LWR LK PLK  L DLRS IVKE C++L  ++    ++MA  +R++L  L+++  +GN V       C+  +++    R P  L+ +  T+ +S++  +R S  S   L L TW     + +V  LE  +   L D SS  RT A   F  F   +PKRA
Sbjct:    4 DALATALAGAMDRIARNGDNWVERMHALVDIRQRFEALQDADDAGALVDAA-LWRSLK-PLKGMLQDLRSQIVKEVCVVLTTMALATKDAMAPFLREVLPTLVEVRGSGNKVCGSYCAECIDALVALVVVRGP-TLRFLVDTLVDSKNKLIRLSCISASRLTLLTWNTVLDKTDVQQLERALKAALNDPSSTCRTQAYEFFVAFQQAFPKRA 212          
BLAST of mRNA_S-latissima_F_contig1004.57.1 vs. uniprot
Match: A0A7E5W8E6_TRINI (CLIP-associating protein isoform X1 n=7 Tax=Noctuidae TaxID=7100 RepID=A0A7E5W8E6_TRINI)

HSP 1 Score: 96.7 bits (239), Expect = 4.650e-19
Identity = 59/214 (27.57%), Postives = 106/214 (49.53%), Query Frame = 0
Query:    9 GLEGVAQSLAHEVVSNPDDWEKRRTALISMQQAVDAVGKSGQGGPTVFTADLWRHLKEPLKHTLNDLRSAIVKEACLLLEKLSTTAANSMAALMRDMLNVLLQLMANGNSVIVGQVDSCMRHVISNTRFPRQLKEMEYTVKNSRSNNLRESVASYVLLMLGTWPAPSMEKEVVHLESIISLLLKDASSGARTDARACFAIFNNHWPKRADRILA 222
            GL+ + +  A  +     DWEKR  AL  ++  + A   + Q  P+ F A L + L  P    + DLRS +V+EAC+ +  ++    N +      ++  L+ L+ N   V+      C+R+++S    PR L  +   +  ++S  +R +++  ++LML  WPA ++EK+   +   I     DA S  RT  R  +A +  H+P+ A+ + A
Sbjct:  345 GLDDLCRHAAALLGDRAADWEKRVDALKKIRSLLTA--NAHQQYPSEFAAHL-KDLSVPFLVVIKDLRSQVVREACITIAHMAKVLRNKIDQFSLYIMQELINLIQNAAKVVSSAGTVCVRYIVSYVHSPRLLPVIVTNLTTNKSKEIRSTLSEVLVLMLEKWPAQTIEKQQASVRDAIRRACVDADSTCRTFGRRAYAAYKRHFPEDAELLFA 555          
BLAST of mRNA_S-latissima_F_contig1004.57.1 vs. uniprot
Match: A0A8K0CK68_9COLE (Uncharacterized protein n=1 Tax=Ignelater luminosus TaxID=2038154 RepID=A0A8K0CK68_9COLE)

HSP 1 Score: 96.3 bits (238), Expect = 6.280e-19
Identity = 63/222 (28.38%), Postives = 112/222 (50.45%), Query Frame = 0
Query:   12 GVAQSLAHEVVSNPD-DWEKRRTALISMQQAVDAVGKSGQGGPTVFTADLWRHLKEPLKHTLNDLRSAIVKEACLLLEKLSTTAANSMAALMRDMLNVLLQLMANGNSVIVGQVDSCMRHVISNTRFPRQLKEMEYTVKNSRSNNLRESVASYVLLMLGTWPAPSMEKEVVHLESIISLLLKDASSGARTDARACFAIFNNHWPKRADRILAAAEPRTAKSL 232
            G       E +++P  DW KR  AL  ++  + A   S +     F A+L R L+ PL+ TL DLRS +++EAC+ +  ++ T  +        +LN L+ L+ N   V+       +R ++  T+ PR +  +   + NS+S ++R S   ++  +L  W    +EK +  L+  +   + DA   AR  +R  F  F +H+P++AD +L + EP   ++L
Sbjct:  332 GEQMKTIQETIADPTKDWNKRADALKKLRSLIIAGATSYEE----FYANL-RLLELPLQATLKDLRSQVIREACITIAYMAQTLNSKFDHSAECLLNPLINLIQNSAKVVATAGHITVRFILQYTQSPRLIPIITNNLSNSKSKDIRRSCCEFLEQVLTQWSTHPLEKHITLLQEALKKGVADADPEARVSSRKAFRGFRDHFPEQADVLLQSLEPSYRRAL 548          
BLAST of mRNA_S-latissima_F_contig1004.57.1 vs. uniprot
Match: A0A2D4C5Q4_PYTIN (CAP-Gly domain-containing protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C5Q4_PYTIN)

HSP 1 Score: 94.4 bits (233), Expect = 6.890e-19
Identity = 70/212 (33.02%), Postives = 108/212 (50.94%), Query Frame = 0
Query:   11 EGVAQSLA---HEVVSNPDDWEKRRTALISMQQAVDAVGKSGQGGPTVFTADLWRHLKEPLKHTLNDLRSAIVKEACLLLEKLSTTAANSMAALMRDMLNVLLQLMANGNSVIVGQVDSCMRHVISNT--RFPRQLKEMEYTVKNSRSNNLRESVASYVLLMLGTWPAPSMEKEVVHLESIISLLLKDASSGARTDARACFAIFNNHWPKRA 217
            + +A +LA     +  N D+W +R  AL  ++Q  +A+  +   G  V  A LWR LK PLK  L DLRS IVKE C++L  ++    ++MA  +R++L  L+++  +GN V       C   +++    R P  L+ +  T+ +S++  +R S  S   L L TW     + +V  LE  +   L D SS  RT A   F  F   +PKRA
Sbjct:    4 DALATALAGAMDRIARNGDNWVERMHALADIRQRFEALQDADDAGALVDAA-LWRSLK-PLKGMLQDLRSQIVKEVCVVLTTMALATKDAMAPFLREVLPTLVEVRGSGNKVCGSYCAECXDALVALVVVRGP-TLRFLVDTLVDSKNKLIRLSXISASXLTLLTWNTVLDKTDVQQLERALKAALNDPSSTCRTQAYEFFVAFQQAFPKRA 212          
BLAST of mRNA_S-latissima_F_contig1004.57.1 vs. uniprot
Match: A0A834HZJ5_RHYFE (Uncharacterized protein n=1 Tax=Rhynchophorus ferrugineus TaxID=354439 RepID=A0A834HZJ5_RHYFE)

HSP 1 Score: 95.5 bits (236), Expect = 1.160e-18
Identity = 60/229 (26.20%), Postives = 112/229 (48.91%), Query Frame = 0
Query:   15 QSLAHEVVSNPDDWEKRRTALISMQQAVDAVGKSGQGGPTVFTADLWRHLKEPLKHTLNDLRSAIVKEACLLLEKLSTTAANSMAALMRDMLNVLLQLMANGNSVIVGQVDSCMRHVISNTRFPRQLKEMEYTVKNSRSNNLRESVASYVLLMLGTWPAPSMEKEVVHLESIISLLLKDASSGARTDARACFAIFNNHWPKRADRILAAAEPRTAKSLRENQAQSAAAN 243
            +S+   +  +  DW KR  AL  ++  V A           F   L ++L  PL++++ DLRS +V+EAC+ +  LS    N        +L  L+ L+ N   ++    D  ++ +I N   PR +  +      S+S  +R S   ++ ++L  WP   +EK+V  L+  +   + DA   AR  +R  F  F +H+P +A+ +L + EP   ++L+ +   ++++N
Sbjct:  327 KSIQEVISDSSKDWNKRVDALKKIRSLVIAGAMQSDD----FYVGL-KNLDIPLQNSIKDLRSQVVREACITIAYLSQNIGNRFDKTAEMLLQSLINLIQNSAKIMATSGDVTVKFLIKNIHNPRLIPIITSNATTSKSKEIRRSCCEFIEIILSHWPTHPLEKQVALLQDCVKKGVADADPEARVSSRKAFKAFRDHFPDQAEVLLQSLEPSYRRALQGDGMSASSSN 550          
BLAST of mRNA_S-latissima_F_contig1004.57.1 vs. uniprot
Match: A0A7J6Z033_9COLE (Uncharacterized protein n=1 Tax=Abscondita terminalis TaxID=2069292 RepID=A0A7J6Z033_9COLE)

HSP 1 Score: 95.5 bits (236), Expect = 1.230e-18
Identity = 65/214 (30.37%), Postives = 110/214 (51.40%), Query Frame = 0
Query:   20 EVVSNPD-DWEKRRTALISMQQAVDAVGKSGQGGPTVFTADLWRHLKEPLKHTLNDLRSAIVKEACLLLEKLSTTAANSMAALMRDMLNVLLQLMANGNSVIVGQVDSCMRHVISNTRFPRQLKEMEYTVKNSRSNNLRESVASYVLLMLGTWPAPSMEKEVVHLESIISLLLKDASSGARTDARACFAIFNNHWPKRADRILAAAEPRTAKSL 232
            EVV++P+ +W KR  AL  ++  V A    G      F   L R+L+ PL+ TL DLRS +V+EAC+ +  LS T  N        +LN L+ L+ N   V+    +  +R ++  T+ PR +  +   +  S+S  +R S   ++ L+L  W    +EK +  ++  +   + DA   AR  +R  F  F +H+P +A+ +L + EP   ++L
Sbjct:  773 EVVADPNKEWNKRVDALKKIRSLVIA----GATNHEEFYIHL-RNLEIPLQGTLKDLRSQVVREACITISYLSQTLTNKFDHCAECLLNGLINLIQNSAKVVATAGNITVRFILQYTQNPRLVPIITSNLGTSKSKEIRRSCCEFLELILMLWSTHPLEKHIGLIQEALKKGIADADPDARVSSRKAFRGFKDHFPDQAEILLQSLEPSYRRAL 981          
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig1004.57.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJI4_ECTSI4.620e-9571.36CAP-Gly domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5KBA3_9PHAE2.950e-7973.26CAP-Gly domain-containing protein n=1 Tax=Ectocarp... [more]
UPI00096B5BFF4.800e-2130.77LOW QUALITY PROTEIN: CLIP-associating protein n=1 ... [more]
A0A2A4K157_HELVI4.070e-2028.50Uncharacterized protein n=16 Tax=Noctuidae TaxID=7... [more]
A0A2D4C9E0_PYTIN4.210e-1933.02CAP-Gly domain-containing protein n=2 Tax=Pythium ... [more]
A0A7E5W8E6_TRINI4.650e-1927.57CLIP-associating protein isoform X1 n=7 Tax=Noctui... [more]
A0A8K0CK68_9COLE6.280e-1928.38Uncharacterized protein n=1 Tax=Ignelater luminosu... [more]
A0A2D4C5Q4_PYTIN6.890e-1933.02CAP-Gly domain-containing protein (Fragment) n=1 T... [more]
A0A834HZJ5_RHYFE1.160e-1826.20Uncharacterized protein n=1 Tax=Rhynchophorus ferr... [more]
A0A7J6Z033_9COLE1.230e-1830.37Uncharacterized protein n=1 Tax=Abscondita termina... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Saccharina latissima female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 10..244
e-value: 2.9E-43
score: 150.3
IPR024395CLASP N-terminal domainPFAMPF12348CLASP_Ncoord: 26..232
e-value: 8.4E-27
score: 94.2
NoneNo IPR availablePANTHERPTHR21567CLASPcoord: 27..236
NoneNo IPR availablePANTHERPTHR21567:SF67CLIP-ASSOCIATED PROTEINcoord: 27..236
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 27..209

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig1004contigS-latissima_F_contig1004:10981..17757 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig1004.57.1mRNA_S-latissima_F_contig1004.57.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig1004 10981..17757 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig1004.57.1 ID=prot_S-latissima_F_contig1004.57.1|Name=mRNA_S-latissima_F_contig1004.57.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=252bp
VAGGGTAGGLEGVAQSLAHEVVSNPDDWEKRRTALISMQQAVDAVGKSGQ
GGPTVFTADLWRHLKEPLKHTLNDLRSAIVKEACLLLEKLSTTAANSMAA
LMRDMLNVLLQLMANGNSVIVGQVDSCMRHVISNTRFPRQLKEMEYTVKN
SRSNNLRESVASYVLLMLGTWPAPSMEKEVVHLESIISLLLKDASSGART
DARACFAIFNNHWPKRADRILAAAEPRTAKSLRENQAQSAAANGTGGGGG
AK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR024395CLASP_N_dom
IPR016024ARM-type_fold