prot_S-latissima_F_contig10.15.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig10.15.1
Unique Nameprot_S-latissima_F_contig10.15.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length232
Homology
BLAST of mRNA_S-latissima_F_contig10.15.1 vs. uniprot
Match: D7FL35_ECTSI (Similar to Rho GTPase activating protein 24 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL35_ECTSI)

HSP 1 Score: 329 bits (844), Expect = 2.410e-101
Identity = 171/229 (74.67%), Postives = 190/229 (82.97%), Query Frame = 0
Query:   11 SQGKVFGVPLVKLMQVTPGEDVPWVLKRFVGFLSKFGLESVGLFRLAGDGVDRAILRAALDDGSQVCWDPEEEVESEN------ECLS--LTDVNMVAQLLKAFFRELPEPLVPFSAYSKVVAIAKAAGVADARWVQAMKNILWSIPNANYNCLRRDFWRRSLFLFAFLRKVAAHSATNRMTSENLAIVWAPNLVRPEDDDPFAILKDLRFQIETVRWMVDCYEQLFED 231
            S+ KVFGVPL+ LMQ   GE VPWV+KRFV FLSKFGLESVGLFRLAGDG+D A LR ALD+G QVCWDP + ++         +C S  L DVNMVAQLLKAFFRELPEPLVPFSAYSKV+AIAKAAGVADARWVQAMK+ILW IP ANYNCLR        FLF FLR+VA HS+TNRMTSENLAIVWAPNL+RP+DDDPFA+L+DLRFQIETVRWMVDC +QLF+D
Sbjct: 1104 SKDKVFGVPLIGLMQ--QGEQVPWVVKRFVDFLSKFGLESVGLFRLAGDGMDCADLRDALDNGKQVCWDPIDPIDEAEGSTGATDCASSSLMDVNMVAQLLKAFFRELPEPLVPFSAYSKVIAIAKAAGVADARWVQAMKSILWGIPIANYNCLR--------FLFEFLREVAMHSSTNRMTSENLAIVWAPNLLRPQDDDPFAVLRDLRFQIETVRWMVDCCDQLFDD 1322          
BLAST of mRNA_S-latissima_F_contig10.15.1 vs. uniprot
Match: A0A6H5JEV0_9PHAE (Rho-GAP domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEV0_9PHAE)

HSP 1 Score: 317 bits (813), Expect = 3.540e-97
Identity = 167/228 (73.25%), Postives = 184/228 (80.70%), Query Frame = 0
Query:   11 SQGKVFGVPLVKLMQVTPGEDVPWVLKRFVGFLSKFGLESVGLFRLAGDGVDRAILRAALDDGSQVCWDPEEEVESENECL--------SLTDVNMVAQLLKAFFRELPEPLVPFSAYSKVVAIAKAAGVADARWVQAMKNILWSIPNANYNCLRRDFWRRSLFLFAFLRKVAAHSATNRMTSENLAIVWAPNLVRPEDDDPFAILKDLRFQIETVRWMVDCYEQLFE 230
            S+ KVFGVPL+ LMQ   GE VPWV+KRFV FLSKFGLESVGLFRLAGDG+D A LR ALD+G QVCWDP + ++   E          SL DVNMVAQLLKAFFRELPEPLVPFS   KV+AIAKAAGVADARWVQAMK+ILW IP ANYNCLR        FLF FLRKVA HS+TNRMTSENLAIVWAPNL+RP+DD PFA+L+DLRFQIETVRWMVDC +QLF+
Sbjct: 1053 SKNKVFGVPLIGLMQ--QGEQVPWVVKRFVDFLSKFGLESVGLFRLAGDGMDCADLRDALDNGKQVCWDPMDPIDETEESTKATVCASSSLMDVNMVAQLLKAFFRELPEPLVPFS---KVIAIAKAAGVADARWVQAMKSILWGIPIANYNCLR--------FLFEFLRKVAMHSSTNRMTSENLAIVWAPNLLRPQDDHPFAVLRDLRFQIETVRWMVDCCDQLFD 1267          
BLAST of mRNA_S-latissima_F_contig10.15.1 vs. uniprot
Match: A0A835Z007_9STRA (Rho-GAP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z007_9STRA)

HSP 1 Score: 195 bits (495), Expect = 1.600e-53
Identity = 109/223 (48.88%), Postives = 145/223 (65.02%), Query Frame = 0
Query:   12 QGKVFGVPLVKLMQVTPGEDVPWVLKRFVGFLSKFG-LESVGLFRLAGDGVDRAILRAALDDGSQVCWDPEEEVESEN--ECLSLTDVNMVAQLLKAFFRELPEPLVPFSAYSKVVAIAKAAGVADARWVQAMKNILWSIPNANYNCLRRDFWRRSLFLFAFLRKVAAHSATNRMTSENLAIVWAPNLVRPEDDDPFAILKDLRFQIETVRWMVDCYEQLFED 231
            +G V GV +  +  V  GE VPWV+ R + FL   G L++VGLFR+AGDGV+   LR A++   QV WDP+E    ++    L L D  +VAQLLKA+FRELPEP++P++ Y +V+AIA+AAG    +WV AMK ILW +P+A Y  LR         LF FLR VA  SA N MT+ NLAIVWAPNL+RP D +PF  L+DL+F  +T  W+++    +F D
Sbjct: 1061 RGPVMGVDI--MAAVGQGE-VPWVVARCMAFLCARGRLDTVGLFRVAGDGVELEALRNAVNGAQQVLWDPDEPPAGDDISAMLHLRDPLVVAQLLKAYFRELPEPIIPYALYPQVIAIARAAGGPTVKWVTAMKTILWKVPSAVYATLRG--------LFLFLRSVADKSAVNLMTAGNLAIVWAPNLIRPMDTNPFVTLRDLQFGTDTTAWLIERVNDVFTD 1272          
BLAST of mRNA_S-latissima_F_contig10.15.1 vs. uniprot
Match: A0A553QQX2_9TELE (Rho-GAP domain-containing protein (Fragment) n=1 Tax=Danionella translucida TaxID=623744 RepID=A0A553QQX2_9TELE)

HSP 1 Score: 112 bits (280), Expect = 3.570e-26
Identity = 69/194 (35.57%), Postives = 104/194 (53.61%), Query Frame = 0
Query:   33 PWVLKRFVGFLSKFGLESVGLFRLAGDGVDRAILRAALDDGSQVCWDPEEEVESENECLSLTDVNMVAQLLKAFFRELPEPLVPFSAYSKVVAIAKAAGVADARWVQAMKNILWSIPNANYNCLRRDFWRRSLFLFAFLRKVAAHSATNRMTSENLAIVWAPNLVRPEDDDPFAILKDLRFQIETVRWMVDCYE 226
            P V+++ V F+ + GL  VGLFR  G       L+ A D G +  +D            S TDV+ VA LLK + RELPEPLVPFS Y + +   K       + +Q ++ +L  +P AN+N L+        ++  FL  V ++S  N+M+ +NLA V+ PN++RP+ +DP +I+  LR  +E  R  V   E
Sbjct:   82 PLVVEQCVDFIREHGLTEVGLFRQPGQATLVKELQEAFDAGEKPSFD------------SSTDVHTVASLLKLYLRELPEPLVPFSRYEEFLGCGKRIASEREKGLQELRILLHELPVANFNLLK--------YICQFLNDVQSYSNVNKMSIQNLATVFGPNILRPKAEDPESIIGGLRSTLEQQRRWVSMAE 255          
BLAST of mRNA_S-latissima_F_contig10.15.1 vs. uniprot
Match: H3CQ06_TETNG (Rho GTPase activating protein 24 n=1 Tax=Tetraodon nigroviridis TaxID=99883 RepID=H3CQ06_TETNG)

HSP 1 Score: 114 bits (286), Expect = 1.280e-25
Identity = 72/220 (32.73%), Postives = 118/220 (53.64%), Query Frame = 0
Query:   13 GKVFGVPL---VKLMQVTPGEDVPWVLKRFVGFLSKFGLESVGLFRLAGDGVDRAILRAALDDGSQVCWDPEEEVESENECLSLTDVNMVAQLLKAFFRELPEPLVPFSAYSKVVAIAKAAGVADARWVQAMKNILWSIPNANYNCLRRDFWRRSLFLFAFLRKVAAHSATNRMTSENLAIVWAPNLVRPEDDDPFAILKDLRFQIETVRWMVDCYEQLF 229
            G +FG  L   V+  +    +  P ++++ V F+ ++GL   GLFRL G       L+ A D G +  +D              TDV+ VA LLK + RELPEP+VPF  Y +++  AK  G  D   V+ +K ++ S+P  NYN L+        ++  FL +V ++S  N+MT +NLA V+ PN++RP+ +DP AI++      + +  ++  ++ LF
Sbjct:   35 GGIFGQKLEETVRYERRFGNKPAPMLVEQCVDFIRQWGLREEGLFRLPGQANLVKELQDAFDCGEKPSFDCN------------TDVHTVASLLKLYLRELPEPVVPFHKYDELLTCAKLLGKDDELGVKELKQLVQSLPPVNYNLLK--------YICRFLDEVQSYSGVNKMTVQNLATVFGPNILRPKVEDPVAIMEGTVLVQQLMAVLIGRHDALF 234          
BLAST of mRNA_S-latissima_F_contig10.15.1 vs. uniprot
Match: A0A3P8WYQ1_CYNSE (Rho GTPase activating protein 24 n=5 Tax=Cynoglossus semilaevis TaxID=244447 RepID=A0A3P8WYQ1_CYNSE)

HSP 1 Score: 114 bits (284), Expect = 2.520e-25
Identity = 67/197 (34.01%), Postives = 110/197 (55.84%), Query Frame = 0
Query:   33 PWVLKRFVGFLSKFGLESVGLFRLAGDGVDRAILRAALDDGSQVCWDPEEEVESENECLSLTDVNMVAQLLKAFFRELPEPLVPFSAYSKVVAIAKAAGVADARWVQAMKNILWSIPNANYNCLRRDFWRRSLFLFAFLRKVAAHSATNRMTSENLAIVWAPNLVRPEDDDPFAILKDLRFQIETVRWMVDCYEQLF 229
            P ++++ V F+ ++GL+  GLFRL G       L+ A D G +  +D              TDV+ VA LLK + RELPEP+VPF  Y   +A AK  G  D   ++ ++ +L S+P  NYN L+        ++  FL +V ++S  N+M+ +NLA V+ PN++RP+ +DP AI++      + +  ++D ++ LF
Sbjct:  147 PMLVEQCVDFIRQWGLQEEGLFRLPGQANLVKELQDAFDCGEKPSFDCN------------TDVHTVASLLKLYLRELPEPVVPFHKYDDFLATAKILGKDDEMGLKELRRLLESLPPVNYNLLK--------YICRFLDEVQSYSGVNKMSVQNLATVFGPNILRPKIEDPVAIMEGTVLVQQLMAILIDHHDVLF 323          
BLAST of mRNA_S-latissima_F_contig10.15.1 vs. uniprot
Match: A0A5A9PH16_9TELE (Rho GTPase-activating protein 24 n=1 Tax=Triplophysa tibetana TaxID=1572043 RepID=A0A5A9PH16_9TELE)

HSP 1 Score: 112 bits (280), Expect = 8.310e-25
Identity = 65/179 (36.31%), Postives = 104/179 (58.10%), Query Frame = 0
Query:   33 PWVLKRFVGFLSKFGLESVGLFRLAGDGVDRAILRAALDDGSQVCWDPEEEVESENECLSLTDVNMVAQLLKAFFRELPEPLVPFSAYSKVVAIAKAAGVADARWVQAMKNILWSIPNANYNCLRRDFWRRSLFLFAFLRKVAAHSATNRMTSENLAIVWAPNLVRPEDDDPFAILKDL 211
            P V+++ V F+ + GL  VGLFR +G       L+ A D G +  +D            S TDV+ VA LLK + RELPEPLVP+S Y +++  AK       + +Q +K++L+ +P AN+N L+        ++  FL  V ++S  N+M+ +NLA V+ PN++RP+ +DP +I+ +L
Sbjct:  156 PLVVEQCVDFIREHGLTEVGLFRQSGQATLVKELQEAFDAGEKPSFD------------SSTDVHTVASLLKLYLRELPEPLVPYSRYEEILVCAKKIPSDREQGLQELKSLLYELPVANFNLLK--------YICQFLNDVQSYSNINKMSIQNLATVFGPNILRPKAEDPESIIGEL 314          
BLAST of mRNA_S-latissima_F_contig10.15.1 vs. uniprot
Match: A0A3B5AIF6_9TELE (Rho GTPase activating protein 24 n=30 Tax=Percomorphaceae TaxID=1489872 RepID=A0A3B5AIF6_9TELE)

HSP 1 Score: 111 bits (277), Expect = 2.170e-24
Identity = 65/197 (32.99%), Postives = 109/197 (55.33%), Query Frame = 0
Query:   33 PWVLKRFVGFLSKFGLESVGLFRLAGDGVDRAILRAALDDGSQVCWDPEEEVESENECLSLTDVNMVAQLLKAFFRELPEPLVPFSAYSKVVAIAKAAGVADARWVQAMKNILWSIPNANYNCLRRDFWRRSLFLFAFLRKVAAHSATNRMTSENLAIVWAPNLVRPEDDDPFAILKDLRFQIETVRWMVDCYEQLF 229
            P ++++ V F+ ++GL   GLFRL G       L+ A D G +  +D              TDV+ VA LLK + RELPEP++PF  Y + +A AK  G  D   ++ +K ++ S+P  NYN L+        ++  FL +V ++S  N+M+ +NLA V+ PN++RP+ +DP AI++      + +  ++  ++ LF
Sbjct:  158 PMLVEQCVDFIRQWGLREEGLFRLPGQANLVKELQDAFDCGEKPSFDCN------------TDVHTVASLLKLYLRELPEPVIPFQKYDEFLACAKLLGKDDEMGMKELKRLVESLPPVNYNLLK--------YICRFLDEVQSYSGVNKMSVQNLATVFGPNILRPKIEDPVAIMEGTVLVQQLMAVLIGRHDVLF 334          
BLAST of mRNA_S-latissima_F_contig10.15.1 vs. uniprot
Match: A0A672HML1_SALFA (Uncharacterized protein n=6 Tax=Ovalentaria TaxID=1489908 RepID=A0A672HML1_SALFA)

HSP 1 Score: 110 bits (276), Expect = 2.950e-24
Identity = 64/197 (32.49%), Postives = 110/197 (55.84%), Query Frame = 0
Query:   33 PWVLKRFVGFLSKFGLESVGLFRLAGDGVDRAILRAALDDGSQVCWDPEEEVESENECLSLTDVNMVAQLLKAFFRELPEPLVPFSAYSKVVAIAKAAGVADARWVQAMKNILWSIPNANYNCLRRDFWRRSLFLFAFLRKVAAHSATNRMTSENLAIVWAPNLVRPEDDDPFAILKDLRFQIETVRWMVDCYEQLF 229
            P ++++ V F+ ++GL   GLFRL G       L+ A D G +  +D              TDV+ VA LLK + RELPEP++PF  Y + +A AK  G  D   ++ ++ ++ S+P+ NYN L+        ++  FL +V ++S  N+M+ +NLA V+ PN++RP+ +DP AI++      + +  ++  ++ LF
Sbjct:  160 PMLVEQCVDFIRQWGLREEGLFRLPGQANLVKELQDAFDCGEKPSFDCN------------TDVHTVASLLKLYLRELPEPVIPFQKYDEFLACAKLLGKDDEMGMKELRRLVDSLPSVNYNLLK--------YICRFLDEVQSYSGVNKMSVQNLATVFGPNILRPKIEDPVAIMEGTVLVQQLMAVLIGRHDVLF 336          
BLAST of mRNA_S-latissima_F_contig10.15.1 vs. uniprot
Match: A0A8C9SIT5_SCLFO (Rho GTPase-activating protein 24-like n=1 Tax=Scleropages formosus TaxID=113540 RepID=A0A8C9SIT5_SCLFO)

HSP 1 Score: 110 bits (275), Expect = 3.500e-24
Identity = 66/198 (33.33%), Postives = 108/198 (54.55%), Query Frame = 0
Query:   32 VPWVLKRFVGFLSKFGLESVGLFRLAGDGVDRAILRAALDDGSQVCWDPEEEVESENECLSLTDVNMVAQLLKAFFRELPEPLVPFSAYSKVVAIAKAAGVADARWVQAMKNILWSIPNANYNCLRRDFWRRSLFLFAFLRKVAAHSATNRMTSENLAIVWAPNLVRPEDDDPFAILKDLRFQIETVRWMVDCYEQLF 229
            VP V+++ VGF+ + GL+ VGLFRL G       L+ A D G +  +D            S TDV+ VA LLK + RELPEP+VPFS Y   +   +       + +  +K  +  +P AN+N L         ++  FL +V +HS +N+M+++NLA V+ PN++RP+ +DP +I+       + +  ++  ++ LF
Sbjct:   53 VPLVVEQCVGFIRQRGLKEVGLFRLPGQATLVKELQEAFDTGEKPSFD------------SSTDVHTVASLLKLYLRELPEPVVPFSRYQDFLLCGRMLSADRKQGLVQLKAHVHELPVANFNLLH--------YICEFLHEVQSHSDSNKMSTQNLATVFGPNILRPKAEDPESIIGGAAVVQQLMSELIGEHQNLF 230          
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig10.15.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FL35_ECTSI2.410e-10174.67Similar to Rho GTPase activating protein 24 n=1 Ta... [more]
A0A6H5JEV0_9PHAE3.540e-9773.25Rho-GAP domain-containing protein n=2 Tax=Ectocarp... [more]
A0A835Z007_9STRA1.600e-5348.88Rho-GAP domain-containing protein n=1 Tax=Tribonem... [more]
A0A553QQX2_9TELE3.570e-2635.57Rho-GAP domain-containing protein (Fragment) n=1 T... [more]
H3CQ06_TETNG1.280e-2532.73Rho GTPase activating protein 24 n=1 Tax=Tetraodon... [more]
A0A3P8WYQ1_CYNSE2.520e-2534.01Rho GTPase activating protein 24 n=5 Tax=Cynogloss... [more]
A0A5A9PH16_9TELE8.310e-2536.31Rho GTPase-activating protein 24 n=1 Tax=Triplophy... [more]
A0A3B5AIF6_9TELE2.170e-2432.99Rho GTPase activating protein 24 n=30 Tax=Percomor... [more]
A0A672HML1_SALFA2.950e-2432.49Uncharacterized protein n=6 Tax=Ovalentaria TaxID=... [more]
A0A8C9SIT5_SCLFO3.500e-2433.33Rho GTPase-activating protein 24-like n=1 Tax=Scle... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Saccharina latissima female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000198Rho GTPase-activating protein domainSMARTSM00324RhoGAP_3coord: 30..226
e-value: 5.8E-37
score: 138.8
IPR000198Rho GTPase-activating protein domainPFAMPF00620RhoGAPcoord: 33..202
e-value: 3.5E-34
score: 117.8
IPR000198Rho GTPase-activating protein domainPROSITEPS50238RHOGAPcoord: 18..229
score: 34.324
IPR008936Rho GTPase activation proteinGENE3D1.10.555.10coord: 7..231
e-value: 4.9E-51
score: 175.3
IPR008936Rho GTPase activation proteinSUPERFAMILY48350GTPase activation domain, GAPcoord: 14..229
NoneNo IPR availablePANTHERPTHR23176RHO/RAC/CDC GTPASE-ACTIVATING PROTEINcoord: 10..231

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig10contigS-latissima_F_contig10:557217..564115 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig10.15.1mRNA_S-latissima_F_contig10.15.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig10 556931..564142 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig10.15.1 ID=prot_S-latissima_F_contig10.15.1|Name=mRNA_S-latissima_F_contig10.15.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=232bp
MFVCGGGATGSQGKVFGVPLVKLMQVTPGEDVPWVLKRFVGFLSKFGLES
VGLFRLAGDGVDRAILRAALDDGSQVCWDPEEEVESENECLSLTDVNMVA
QLLKAFFRELPEPLVPFSAYSKVVAIAKAAGVADARWVQAMKNILWSIPN
ANYNCLRRDFWRRSLFLFAFLRKVAAHSATNRMTSENLAIVWAPNLVRPE
DDDPFAILKDLRFQIETVRWMVDCYEQLFED*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000198RhoGAP_dom
IPR008936Rho_GTPase_activation_prot