mRNA_S-latissima_F_contig103.268.1 (mRNA) Saccharina latissima SLPER63f female
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Overview
Homology
BLAST of mRNA_S-latissima_F_contig103.268.1 vs. uniprot
Match: D7FV92_ECTSI (Spindle pole body component n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV92_ECTSI) HSP 1 Score: 1259 bits (3258), Expect = 0.000e+0 Identity = 698/1090 (64.04%), Postives = 799/1090 (73.30%), Query Frame = 2
Query: 89 MLHEVLVSLLGHPGSIIQEEPAISTTTTSSSA------SDGFKSGSTFRVPDTITFLTATERAAINRVVGIGSIYRDLRKFSRPKALLWVEGGFSAPGIDGNSGHGRKEGDGLYLRALKVGVVEVLDEYAGRVAEVERDVMADPTLTLARVYAGVREYTSILPAVAEACVAATADRERGRLKGAQVLEILHERSHFGAPDVRRRLCRLVWHCSQVLINQCVSWLLHGLIVDPCGEFFVQKNAQPAASTTASSARPALSVGLDEPGNERHTGFEEGVEAASRRVGDWGGEEEWNSTYTVRLALVPTTFVPHRLAQKMLFVGKVVRVLHQASPQSTSAQQSAPFAEWPSESGVKGDGLSTDLSANVPGAGVVGAEGGGGMGVSEAEVLELTQRWSELCDREAFNLLALERAVHEAHALVDRRLYRLLVHVSGLEKHLSSLKGLFLMGHGALFHSFFDKAREAMHTPAGDRAVLDLNMWLAAAAEDNEG--GHASLPSSESTLSRVVIALDPSGFTCKTFHDLTKQGFCVTGRARHSPNKSAVCLCPGGL-DARSPPKRPPPSSAPAEAEAKPRSA----------GGSLWYASDRELPRGFTSSVAFRCDR--PQLNAKGGAGEEK-----VADPVGRSGSVSFVMHNHXXXXXXXXXXXXXXXXXXAAVPNSLSVQLEPDGHGGGQVLLRWNPHLSPSLPPPEMSASI---------DVGGVSLDNPSEG----RGLGLRTLGRASLPRSCGLHLGQVNYLMVDYALGEARPTRKPRKASDKAAPSRKES-GPSARLKVFVNDPGRSGSASLSVALDLWALIEMGGGRAFVGVSAEGPWRTTLRQWDFRLG-SAAAAGKAS---GPLGGVGSGPQVEKMVEAMDSWNGLCLDYRLEWPLHLILTRETMQIYNRLFRLLASVKRTSLELERVWPTLMQRRYRGEANNEKAWLGPLWMLRARMAFFVSNLAFYLQVDVVEAAHTVMKAKLETVRDFVSLQRAHQEMLSTLRAKFYLDNLDISQGLGRALRHVLRFCCLFAVHGNAKNIIPAEVTSLHQAFQDEMKILMPVLERLAKELAMRLDFNGHFSVEVL 3226
MLHEV+++LLGHPG+I+Q EP S T +S+ + +G TFRVPDTITFLTATER AINRVVG+GSIYRDLR F RP+AL W EGG G + +++ GLYLRALK+GV E+LDEYA RVAEVERDVM DPTLTLARVYAGVRE+ SILPA+AEACVA D + G L+G Q+LE L+ERSHFGAPDVRR+L R+VWHCSQVLINQC SWLLHGL+VDPC EFFV KN P + T SS ++ N+R T ++ VE A DW EEEWNSTYT+RL LVPT+FVPH LAQKMLFVGKVVRVL QA+ S S +AP + WP +S V GDG GV+EAEVLELTQRWSEL DRE F+LLALERAVHEAH+LVDRRLYRLLV+VSGLE HLSSLK LFLMGHG+LFHSFFDKAREAM AGDRAVLDLN WLAAA ED EG ++ SS STL R + LDP GF+CK F DLT+QGFCVTG A HS K +VCLCPG S PKR PSS ++PR+A GSLWY SDRE+PRGF SSVAFRCDR P +A G+ ++ VA P G S +SFV+H H A VPNSLSV+LEPDG GGGQV +RWNPH SPSLP P++ DV G +D + G RG +R LG+A+LP SCGL LGQVNYLMVDY+LG RP +PR+ + A SR+ G A L VFVNDPGRSGS LSV LD+W LIE+GGG AFVGVSAEGPWRTTLRQWDF LG S+AA GK GPLGGVGSGP+VE+M+EAMDSW+GLCL YRLEWP+HL+LTRETMQ YNRLFRLLA VKR SLELERVWPTLMQ RYRG AN E AWLGPLWMLRARMAFFVSNLAFYLQVDVVEAA+T++++KL TVRDFVSLQRAHQE L+TLRAKFY+DNL I+QGLGRALRHVLRFCCLF++HG+AK+I+ +EV +LH AFQDEMK+L+PVLE++AKEL MRLDFNGHFS E L
Sbjct: 1 MLHEVILALLGHPGAIVQAEPTNSLLRTKTSSRLSTNPARASAAGGTFRVPDTITFLTATEREAINRVVGMGSIYRDLRNFVRPQALTWTEGG----GTSVSGAEQQQQHAGLYLRALKLGVRELLDEYAERVAEVERDVMEDPTLTLARVYAGVREFQSILPAIAEACVAVAGDGDSGLLEGPQLLEALNERSHFGAPDVRRKLRRIVWHCSQVLINQCASWLLHGLLVDPCEEFFVHKNFDPTCTATRSSMATNPDDIWNDNENDRWTALDDSVEGAWEGAVDWRAEEEWNSTYTLRLPLVPTSFVPHGLAQKMLFVGKVVRVLCQANTLSLSTS-AAPRSAWPGDSAV-GDGXXXXXXXXX--------------GVNEAEVLELTQRWSELRDREDFHLLALERAVHEAHSLVDRRLYRLLVNVSGLEGHLSSLKRLFLMGHGSLFHSFFDKAREAMKVKAGDRAVLDLNTWLAAAVEDTEGHDSDGAVSSSASTLDRARLDLDPPGFSCKAFQDLTRQGFCVTGAATHSSKKPSVCLCPGDSGQTSSSPKRSAPSSXXXXRASRPRAAPTAPPMTGVGAGSLWYTSDREVPRGFRSSVAFRCDRHKPSPDAIPGSAPQETVGAQVAGPAGPS--LSFVVHQHRAALSGSEDSAGEGIGRSAMVPNSLSVRLEPDGEGGGQVSVRWNPHRSPSLPRPDVDIGTFLAGTTNRRDVSGAEVDGENLGQGQSRGQAVRLLGQATLPSSCGLSLGQVNYLMVDYSLG-GRP--RPRRDEREEAVSRERGLGVGAELMVFVNDPGRSGSPVLSVKLDMWKLIELGGGHAFVGVSAEGPWRTTLRQWDFHLGCSSAAVGKPQTSLGPLGGVGSGPRVEEMLEAMDSWSGLCLHYRLEWPMHLVLTRETMQTYNRLFRLLACVKRASLELERVWPTLMQSRYRGLANEESAWLGPLWMLRARMAFFVSNLAFYLQVDVVEAAYTLLRSKLVTVRDFVSLQRAHQEFLATLRAKFYVDNLAIAQGLGRALRHVLRFCCLFSLHGDAKDILHSEVIALHDAFQDEMKLLVPVLEKVAKELMMRLDFNGHFSAEAL 1065
BLAST of mRNA_S-latissima_F_contig103.268.1 vs. uniprot
Match: A0A836CCL2_9STRA (Spc98 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCL2_9STRA) HSP 1 Score: 290 bits (743), Expect = 8.440e-77 Identity = 288/1026 (28.07%), Postives = 417/1026 (40.64%), Query Frame = 2
Query: 89 MLHEVLVSLLGHPGSIIQEEPAISTTTTSSSASDGFKSGSTFRVPDTI--TFLTATERAAINRVVGIGSIYRDLRKFSRPKALLWVEGGFSAPGIDGNSGHGRKEGDGLYLRALKVGVVEVLDEYAGRVAEVERDVMADPTLTLARVYAGVREYTSILPAVAEACVAATADRERGRLKGAQVLEILHERSHFGAPDVRRRLCRLVWHCSQVLINQCVSWLLHGLIVDPCGEFFVQKNAQPAASTTASSARPALSVGLDE--PGNER-------HTGFEEGVEAASRRVGDWGGEEEWNSTYTVRLALVPTTFVPHRLAQKMLFVGKVVRVLHQASPQSTSAQQSAPFAEWPSESGVKGDGLSTDLSANVPGAGVVGAEGGGGMGVSEAEVLELTQRWSELCDREAFNLLALERAVHEAHALVDRRLYRLLVHVSGLEKHLSSLKGLFLMGHGALFHSFFDKAREAMHTPAG---DRAVLDLNMWLAAAAEDNEGGHASLPSSESTLSRVVIALDPSGFTCKTFHDL-TKQGFCVTGRARHSPNKSAVCLCPGGLDARSPPKRPPPSSAPAEAEAKPRSAGGSLWYASDRELPRGFTSSVAFRCDRPQLNA----KGGAGEEKVADPVGRSGSVSFVMHNHXXXXXXXXXXXXXXXXXXAAVPNSLSVQLEPDGHGGGQVLLRWNPHLSPSLPPPEMSASID-VGGV------------SLDNPSEGRGLG-------LRT----------LGRASLPRSC----GLHLGQVNYLMVDYALGEARPTRKPRKASDKAAPSRKESGPSARLKVFVNDPGRSGSASLSVALDLWALIEMG--GGRAFVGVSAEGP--WRTTLRQWDFRLGSAAAAGKASGPLGGVGSGPQVEKMVEAMDSWNGLCLDYRLEWPLHLILTRETMQIYNRLFRLLASVKRTSLELERVWPTLMQRRYRGEANNEKAWLGPLWMLRARMAFFVSNLAFYLQ--------------------VDVVEAAHTVMKAKLETVRDF 2935
M HEVL + LG PGS+I E+P G + FRV +FL+ E INRV +G +YR L + SR + G + + DGLYL AL+ G+ E+L+EY VAEVE +++ DPTL ++ + +R Y + A+A C A + RG Q+L++L++RS GAP VR RL RL+WHC QV NQ +W L+G ++DP +FF + A+ A A A+ DE P +E H G A A++P + P +LAQ++LF GK VRV+ + + + G ++ AEV + W + RE F+LL+++ A+ HA RRL+RL+VH L HL+++ L+ G LFH+F AR + +G A ++ A + A + +RV +ALD C T F + G A H + V LC G G++WYAS R++ F++S AFR A GG+G+ P +G VS V+ + S++V L+ G + +LPPP+ A+ VGGV S S G G G +RT + A LPR+ G G V ++ +D G A R L+++VNDP G +L + L ALI G +VGV+A GP ++ QW F G + P+G W L + YRLEWPLHL+L M Y RL LL VKR S+E++++WP LM R+R A + L LW LRA MAF+ +NL +YL VDV++A H ++A + DF
Sbjct: 1 MQHEVLAACLGCPGSVIWEDPTYQP--------PGTQRRGAFRVSQGAANSFLSKAEVELINRVCELGFLYRRLSQVSRDAQV--PHAGPAEADAPADPALPPPSADGLYLTALRAGIEEMLEEYDTTVAEVEEELVGDPTLPVSYIQHRLRSYLPVFGALAAVCDAIVKEEARG----GQLLQLLYDRSRVGAPAVRERLLRLLWHCHQVFFNQIAAWCLYGQLLDPYKDFFREHCLHHGAAAAAVGATNAMERCWDEEYPLSEFFIEHCPCHATXXXGAAADXXXXXXXXXXVVAGGATGQGAAMLPARYFPAQLAQRVLFAGKAVRVVSEGAARGEXXXXXXXXXXXXXXXGC----------------------------LAPAEVARFLEAWGGVKRREEFHLLSVQAAIDHIHAAAARRLWRLVVHRGRLPLHLNAIHDYVLLARGDLFHAFLSAARSTLRGGSGGSSSAAPAPQDVARLARGALRQAARACGADDDPLFARVALALDFPSVRCATLGGADAAAAFSLAGGAAHDAGSACVALCSGVXXXX---------XXXXXXXXXXXXXXGAMWYASRRDIGGAFSTSFAFRHSIDAAAAAAAPSGGSGKR----PRQPTGGVSLVLQG----ASARALGRGGGGMGSEGIRGSVAVCLQLCG--------------ASALPPPQRPAAPSGVGGVDASARVSTASWVSGSTRSSGGGSGGDGHAVFIRTQAPGQAEGEVVASAVLPRAALDGGG---GGVTFVRLD-CTGXXXXXXXXXXXXGAAQQWR-------LLRMYVNDPEGRGEPALEADVPLAALIPSAAAGDGGYVGVTAGGPPGLGVSVVQWAFTCGGGGGGEGGAEPVGA---------------RWEQLQISYRLEWPLHLVLGGAAMAEYGRLSALLLHVKRCSMEVDQLWPLLMHPRFRSPAPAARPQLAQLWRLRAMMAFYTTNLHYYLXXXXXXXXXXXXXXXXXXXXXVDVIQAEHAALRAAVAAATDF 927
BLAST of mRNA_S-latissima_F_contig103.268.1 vs. uniprot
Match: A0A7S0GRP2_9EUKA (Spindle pole body component n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0GRP2_9EUKA) HSP 1 Score: 219 bits (558), Expect = 9.410e-55 Identity = 286/1156 (24.74%), Postives = 465/1156 (40.22%), Query Frame = 2
Query: 77 KRGGMLHEVLVSLLGHPGSIIQEEPAISTTTTSSSASDGFKSGSTFRVPDTITFLTATERAAINRVVGIGSIYRDLRKF-SRPKALLWVEGGFSAPGIDGNSGHGR--KEGDGLYLRALKVGVVEVLDEYAGRVAEVERDVMADPTLTLARVYAGVREYTSILPAVAEACVAATADR-ERGR----------------------LKGAQVLEILHERSHFGAPDVRRRLCRLVWHCSQVLINQCVSWLLHGLIVDPCGEFFVQKNAQPAASTTASSARPALSVGLDEPGNERHTGFEEGVEAASRRVGDWGGEEEWNSTYTVRLALVPTTFVPHRLAQKMLFVGKVV------RVLHQASPQSTSAQQSAPFAEWPSESG-VKGDGLSTDL-------------------SANVPGAGVVGAEGGGGMGVSEAEVL-ELTQRWSELCDREAFNLLALERAVHEAHALVDRRLYRLLVHVSGLEKHLSSLKGLFLMGHGALFHSFF-DKAREAMHTPAGDRAVLDLNMWLAAAAEDNEGGHASLPSSESTLSRVVIALDPSGFTCKTFH--------DLTKQGFC-VTGRARHS-----PNKSAVCLCPGG------LDARSPPKRPPPSSAPAEAEAKPRSAGGSLWYASDRELPRGFTSSVAFRCDRPQLNAKGGAGEEKVADPVGRSGSVSFVMHNHXXXXXXXXXXXXXXXXXXAAVPNSLSVQLEPDGHGGGQVLLRWNPHLSPSLPPPEMSASIDVGGVSLDNP-SEGRGLGLRTL---GRASLPRSCGLHLGQVNY-LMVDYALG-------EARPTRKPRKASDKAAPSRKESGPSARLKVFVNDPGRSGSASLSVALDLWALIEMGGGRAFVGVSAEGPWRTTLRQWDFRLGSAAAAGKASGPLGGVGSGPQVEKMVEAMDSWNGLCLDYRLEWPLHLILTRETMQIYNRLFRLLASVKRTSLELERVWPTLMQRR-YRGEANN-----------EKAWLGPLWMLRARMAFFVSNLAFYLQVDVVEAAHTVMKAKLETVRDFVSLQRAHQEMLSTLRAKFYLDNLDISQGLGRALRHVLRFCCLFAVHGNAKNIIPA--EVTSLHQAFQDEMKILMPVLERLA--------KELAMRLDFNGHFSVE 3220
K + HEVL++LLGH G +I S + GFK V + +TFL + R+ I+ V G YR++ F + + + + F+ +G+ + + G GLYLRAL VG+ E+L EY V ++E+D++++P + ++ +R++T + P + + + + ERG LKG Q+LE LH + G P+VR+ L RL++HC +VL NQ S+++HG + DP EFF++ QP A GN+ T GV +SR E WN+ +T+R +++P +++P R A+ +LF+G V R+ + ++S E + G KG+ LS L S ++ A ++GA G G+ L E + L + + F+ E + + V+R + L+V+ L + L +LK +F + G + +F D A P ++ L A A + G A + R + LD F + F D + Q + GR H+ P + LC L +P R P ++ P G+ +Y R+L GFT+ +F P GA + P+ + V+ N S+ GH G + L + L+ + V VS S G L + R S+PR V Y L VDYA G EA P + A D+ A G + V + + +I + G A++G+ G ++ W +R GV + + +W L LDYR++ PL L++ + + YN LF L VKR L L+R W L +R +RG E+A + +W LR +M F V NL +YLQVDV++ AH+ ++ ++ F ++ RAH LSTL + +L I + FC L V G + V+ L + F+ + L VL + + ++L +R+D+N +S E
Sbjct: 8 KMSVIYHEVLLALLGHTGDVISAISPRSLKRETKIRGHGFK------VSEDLTFLDKSTRSVIDLVCSHGYYYREISHFVDKNQYVRFFTAQFTRKESNGSDLNSDPVEAGRGLYLRALCVGLDEILQEYRCLVLKLEQDILSNPAIPATKLKYMLRKFTILFPPLHNLTLEISGEAMERGEATESKSKYDAEANTPRRERVAWLKGGQILEALHRHAQVGVPEVRKALLRLLFHCHRVLYNQITSFIVHGFLTDPFEEFFIK--LQPPA------------------GNQVITDTPSGVSNSSRNPLAQR-ERVWNTQFTLRPSMLPVSYIPMRFARTVLFIGYAVCLLQHPRIARYIALHYPEEEESLMQREDSNIDGETKGNRLSGRLGGRSTSGFLDLQYRRRRRSSVSMSAAMLLGAAPEFGAGLLPQHALQEFEESLRALANAKVFDAAKAEAELSQMRRTVNRHMCELVVNRGQLIRQLKALKDVFFLARGEFWQTFVEDGASTFFREPTFSKSARTLAERAFAGAAASSGFDA-----DPFFDRFTLYLDEPAFGFQGFSSSPTSTSVDASWQAERDLLGRRSHTTPLRVPGVHQIELCGSARYEGKELLIGAPSSRKPSAAPP-----------GAAYYRFRRKLEDGFTARCSFLLRPPPR----GAAAQVATRPL----EFALVLQNS-------------------------SISAIGSGHKGLEGLTNY---LAVEFATGMSDTILQV--VSKPRKASVGESKELEPVIVHSRQSIPRL----RESVRYALRVDYAAGILTVRYHEAVPGSGSKTAGDEKA---------------------GGGSVFRVQVSISRVIRLDSGGAWLGLLGGGGGGISISSWSYR---------------GV-------VRDQGVHAWRHLRLDYRVDPPLDLLVKEKVLADYNSLFSFLFEVKRVQLALQRAWRPLRRRAAFRGTPGRLGSRNLDGNAKERASMLRVWELRHKMQFLVDNLQYYLQVDVLDVAHSELERRVRDATGFEAVARAHTMYLSTLAERCFLYTPVIHRAFRTVFEVCTHFCGLVGVPGAGRLDASGLRRVSGLARDFRLQSTFLFSVLAKTSARGASPHLQQLILRIDYNRSYSRE 1035
BLAST of mRNA_S-latissima_F_contig103.268.1 vs. uniprot
Match: A0A7S2W3Z6_9STRA (Spindle pole body component n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W3Z6_9STRA) HSP 1 Score: 191 bits (486), Expect = 1.840e-47 Identity = 199/680 (29.26%), Postives = 298/680 (43.82%), Query Frame = 2
Query: 1373 LSSLKGLFLMGHGALFHSFFDKAREAMHTPAGDRA--VLDLNMWLAA--AAEDNEGGHASLPSSESTLSRVVIALDPSGFTCKTFHDLTKQGFCVTGRARHSPNKSAVCLCP----GGLDARS----------PPKRPPPSS-----APAEAEAKPRSA----GGSLWYASDRELPRGFTSSVAFRC----DRPQLNAKGG-AGEEKVAD-PVGRSGSVSFVMHNHXXXXXXXXXXXXXXXXXXAAVPNSLSVQLEPDGHGGGQVLLRWNPHLSPSLPPPEMSASIDVGGVSLDNPSEGRG-LGLRTLGRASLPRSCGLHLGQVNYLMVDYALGEARPTRKPRKASDKAAPSRKESGPSARLKVFVNDPGRSGSASLSVALDLWALIEMGGGRAFVGVSAEGPW-RTT---------LRQWDFRLGSAAA-----------------AGKASGPLGGVGSGPQVEKMVEAMDSWNGLCLDYRLEWPLHLILTRETMQIYNRLFRLLASVKRTSLELERVWPTLMQRRYRGEANNEKAWLGPLWMLRARMAFFVSNLAFYLQVDVVEAAHTVMKAKLETVRDFVSLQRAHQEMLSTLRAKFYLDNLDISQGLGRALRHVLRFCCLFAVHGNAKNIIPAEVTSLHQAFQDEMKILMPVLERL-AKELAMRLDFNGHFSVEVL 3226
L ++K L LMG G +H +AR+ M R+ +L LAA + + E AS R V+A++ F+C+ F L+ GF + G A H+ AV L G L RS PP PSS A + A A P S G++W + + L RGFT V F DRP + G AG P S V+ V+ N N+L+V +E L W + ++ + + PS + + RTL RA LPR H +++L+V+Y + +G + L+VF +DP + LS+ L L I + AF+GV R+T LR+W + S++ A + S +E++++A +W+ L L+Y ++WPLHLI T+E + YN++F LL + KRT LELE +WP LM+ RYR + WL PL + + M FFV NL YLQVDVVEA + + + L+ +F +++RAH L+ L+ K ++ + +G+ R LR F LFA +A I +EV + + F+ E L +LER AKELA RL+++G F L
Sbjct: 1 LKAVKDLLLMGRGEFWHELMVQARDMMRVQPNTRSEDLLFHGPMLAALRSCKLEEDVFASRL-------RPVLAME--SFSCRQFDTLS--GFRLVGAAAHNRETRAVDLTAPLALGSLARRSSAAAPAEGAMPPGHTEPSSWFSTGAFSTATAAPDSEEDLRAGAVWTKAKKRLRRGFTCHVKFNWEAADDRPSHSGLAGDAGTPMALSLPPMTSARVAVVVRNSRGITPLITSADGVED-----AANTLAVVVE------WSALDAWVAVRASERAALGLALGGSTAAPTDEEPSSAQTPVASRTLHRAQLPRRPVPH--SMHWLLVEY----------------------EAAGADSMLRVFFDDPKQQHEPLLSLPLTLHKTISLDADSAFLGVQGSITHSRSTVAFPQIALQLREWSLAVKSSSTGSAGYSVSLQRSYSTGTAEEGRSTALSASSTQAMERLLDAQATWDDLHLEYTVDWPLHLIFTQEALAAYNKVFSLLWATKRTMLELELLWPQLMETRYRVLTGPDLIWLRPLHTIHSEMLFFVKNLLVYLQVDVVEAQFSKLVSSLQLQEEFDAVRRAHNTYLAALQKKSHIAVRPLMEGIQRVLRSCRHFAALFANFSDAAEIPHSEVEAAVEQFRTEATGLYMLLERTDAKELAARLNYSGWFEQRAL 634
BLAST of mRNA_S-latissima_F_contig103.268.1 vs. uniprot
Match: J9IBE2_9SPIT (Spindle pole body component n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9IBE2_9SPIT) HSP 1 Score: 184 bits (467), Expect = 1.150e-43 Identity = 239/1143 (20.91%), Postives = 432/1143 (37.80%), Query Frame = 2
Query: 89 MLHEVLVSLLGHPGSIIQEEPAISTTTTSSSASDGFKSGSTFRVPDTITFLTATERAAINRVVGIGSIYRDLRKFSRPKALLWVEGGFSAPGIDGNSGHGRKEGD------------------------GLYLRALKVGVVEVLDEYAGRVAEVERDVMADPTLTLARVYAGVREYTSILPAVAEACVAATADRERGRLKGAQVLEILHERSHFGAPDVRRRLCRLVWHCSQVLINQCVSWLLHGLIVDPCGEFFVQK---NAQPAASTTASSARPALSV---GLDEPGNERHTGFEEGVEAASRRVGDWGGEEEWNSTYTVRLALVPTTFVPHRLAQKMLFVGKVVRVLHQASPQSTSAQQSAPFAEWPSESGVKGDGLSTDLSANVPGAGVVGAEGGGGMGVSEAEVLELTQRWSELCDREAFNLLALERAVHEAHALVDRRLYRLLVHVSGLEKHLSSLKGLFLMGHGALFHSFFDKAREAMHTPAGDRAVLDLNMWLAAAAEDNEGGHASLPSSESTLSRVVIALDP---SG-FTCKTFHDLTKQGFCVTGRARHSPNKSAVCLCPGGLDARSPPKRPPPSSAPAEAEAKPRSAGGSLWYASDRELPRGFTSSVAFRCDRPQLNAKGGAG-------------------------EEKVADPVGRSGSVSFVMHNHXXXXXXXXXXXXXXXXXXAAVPNSLSVQLEPDGH-----GGGQVLLRWN-------PHLSPSLPPPEMSASIDVGGVSLDNPSEGRGLGLRTLGRASLPRSCGLHLGQVNYLMVDY---------ALGEARPTRKPRKASDKAAPSRKESGPSARLKVFVNDPGRSGSAS----LSVALDLWALIEMGGGRAFVGVSAEG---PWRTTLRQWDFRLGSAAAAGKASGPLGGVGSGPQVEKMVEAMDSWNGLCLDYRLEWPLHLILTRETMQIYNRLFRLLASVKRTSLELERVWPTLMQRRYRGEANNEKAWLGPLWMLRARMAFFVSNLAFYLQVDVVEAAHTVMKAKLETVRDFVSLQRAHQEMLSTLRAKFYLDNLDISQGLGRALRHVLRFCCLFAVHGNAKNI-----IPAEVTSLHQAFQDEMKILMPVLERLAK---------ELAMRLDFNGHFS 3214
MLHE+L++L GH GSIIQE+ DGF V + FL+ E INR+ +G +++ ++ F + + D K+ G+Y++A GV E++ Y + +E + + D +LT+ + + Y I PA+ ++ + E LKG Q+L+ +++ G P ++ ++++ C +VL Q +W++HG +VD C EFF+ K + Q L+ + N G ++ S D ++EWNS YT+R++++P ++ P LA+K+LF+GK VRVL T LS +P + + E ++ +L FN+L + R + E + RL L+V + L +HL +K FL+ G + +F ++AR+ M P + DLN+ + T+ ++ + D SG + H K+ + R++ + KS G+LW+ + L GF ++ AF+ +N GG G + + P G + F HN+ A N+L + G + ++ W L+ + ++ VGG N +T + S +G++ ++ D L E + D + + + L+VFV D + + +++ L + +++ G A++G + E P + W F E D WNGL LDYR WPLHL+ + + ++ YN LFR L +KR L+L+ VW + R + ++ A+ + +LR M+F V NL YLQVDV+E+ T ++ + +DF ++ H + L ++ + +L+N + + ++ V+ C L ++ + E + F+++ + +L +L +RLD+N + S
Sbjct: 1 MLHELLLALFGHTGSIIQEDQ------------DGFV------VNPNLNFLSQAEIEMINRISYLGFLFKQIQSFLHKYGGISTKLAIQLAYNDLYQNEKIKDQPNQNXXXXXXXXXXXXXXXXQDELFGVYIKAFCSGVNEIITTYKQHLLSIEHEYLKDRSLTIPSLQQKLAIYQQIFPAI----LSFMQNIEEQNLKGGQLLDAIYQSCTTGNPVIKSMFNKILFCCHRVLFLQINAWIVHGQLVDLCEEFFIHKINNSNQSMGKNQEGGEESKLNQTVNSITSISNINLVGSILTMDPESFGADDETKDDEWNSVYTLRISMLPCSYFPPSLAEKILFIGKAVRVLQSKK---------------------------TQLSDRIP--------------IQDLEAF--SEAIMKLQKMPEFNVLLISRIIEEMRESIASRLLHLVVIKANLVEHLREIKNYFLISKGEFYQTFLEEARQIMSLPPQSSSEFDLNVGPL----------------QQTIIKLGLEDDAYLRSGLYYIGDVHIDIKKNYSFRIRSQKTSRKS-----------------------------------GALWHCLKQRLDMGFKTTFAFKFKNMLING-GGQGMNASIISGSVMGSPAKGSRNYMTNDQNSIMGPPGGR-NTQFGNHNYNQTMGSFAGDESQNLGQLA---NNLGQDSKIQGALCFIIQNEKEVIPWKRTTPMGTSDLNSFISVKFLTKIQSVGGQLNQNRLSILRQQFQTQHLIQVWASTETSIGKIKTMIDDNNQNVSTKNEILLEEKDVTNEMDFMDNDSHQIQLEYSNDELRVFVIDGTSQQNQNKIQVMNLNLKISDYVKLDNGTAYLGFTHETLNLPNLLYIENWTFIS----------------------EAKSNQQDPWNGLSLDYRSHWPLHLMFSPDVIEKYNTLFRFLLPIKRIQLDLQHVWAVKV--RLMKQFSHIPAFRKTM-LLRQHMSFLVDNLFSYLQVDVLESQWTKLEKGINITQDFEEVRLLHDKYLLSITEQCFLNNNQVL----KVIQDVIHMCMLMCKLLKQLDVYNHEAVEDEFDKIKSNFENQSNKMFKLLSNFKNYHQSSPYLAQLLLRLDYNNYMS 993
BLAST of mRNA_S-latissima_F_contig103.268.1 vs. uniprot
Match: W1NYA3_AMBTC (Gamma-tubulin complex component n=2 Tax=Amborella trichopoda TaxID=13333 RepID=W1NYA3_AMBTC) HSP 1 Score: 174 bits (441), Expect = 3.440e-41 Identity = 130/468 (27.78%), Postives = 232/468 (49.57%), Query Frame = 2
Query: 89 MLHEVLVSLLGHPGSIIQEEPAISTTTTSSSASDG-FKSGSTFRVPDTITFLTATERAAINRVVGIGSIYRDLRKFS-RPKALLWVEGGFSAPGIDGNSGHGRKEGDGLYLRALKVGVVEVLDEYAGRVAEVERDVMADPTLTLARVYAGVREYTSILPAVAEACVAATADRERGRLKGAQVLEILHERSHFGAPDVRRRLCRLVWHCSQVLINQCVSWLLHGLIVDPCGEFFVQKNAQPAASTTASSARPALSVGLDEPGNERHTGFEEGVEAASRRVGDWGGEEEWNSTYTVRLALVPTTFVPHRLAQKMLFVGKVVRVLHQASPQSTSAQ-------QSAPFAEWPSESGVKGDG-LSTDLSANVPGAGVVGAEGGGGMGVSEAEVLELTQRWSELCDREAFNLLALERAVHEAHALVDRRLYRLLVHVSGLEKHLSSLKGLFLMGHGALFHSFFDKAREAMHTP 1462
MLHEVL++LLG+ G I +E + ++ + D TF + ITF+T ++R + R++ +G YR+L +F+ + + L W+ P ++ G+ + +Y RAL G++E+L Y V ++E+ +++DP LA V G ++ +LP + E + + ERG ++G Q+L +LH+R H G P+++ + RL+WH QV+ +Q +W++HG++ DP GEFF+++ ++S + P + A + + D G +W+ + V L ++P ++ R+A+ +LF GK +RVL SP S Q PF + G +STD ++ E + SEA+ ++ + EL F+ + E V+ + L++L+V + L HL +LK FL+ G F F +++R+ M P
Sbjct: 1 MLHEVLLALLGYTGDFIVDEMENANPSSGCLSRDSDVAEECTFSLAPDITFITTSQRDVLERLIPLGFYYRELDRFATKSRNLSWIRLMHDDPQPHVSNSKGKSKQPSVYRRALANGILEILSVYRSAVLQIEQTLLSDPVPILATVAEGFNKFHVLLPPLHELIL----EVERGDIRGGQLLNLLHKRCHCGVPELQACIQRLLWHGHQVMYHQLSAWMVHGILQDPYGEFFIRRQQDKEFEHSSSHSDPLYK------------------KLAHKSLED-GSITDWHMGFHVFLEMLPE-YIHMRVAESILFAGKAIRVLRNPSPAFQSQNNALYQLIQRGPFRIRGAMERFAGQKEISTDTQ-------LIEEEL---LPQSEADKIDCMLQ--ELKAAAEFHKRSFENVVNSIRIIAANHLWQLVVVRADLNGHLKALKDYFLLAKGDFFQCFLEESRQLMTLP 432
BLAST of mRNA_S-latissima_F_contig103.268.1 vs. uniprot
Match: A0A835V918_VANPL (Gamma-tubulin complex component n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835V918_VANPL) HSP 1 Score: 164 bits (415), Expect = 5.990e-38 Identity = 131/469 (27.93%), Postives = 227/469 (48.40%), Query Frame = 2
Query: 89 MLHEVLVSLLGHPGSIIQEEPAISTTTTSSSAS-DGFKSGSTFRVPDTITFLTATERAAINRVVGIGSIYRDLRKFS---RPKALLWVEGGFSAPGID----GNSGHGRKEGDGLYLRALKVGVVEVLDEYAGRVAEVERDVMADPTLTLARVYAGVREYTSILPAVAEACVAATADRERGRLKGAQVLEILHERSHFGAPDVRRRLCRLVWHCSQVLINQCVSWLLHGLIVDPCGEFFVQKNAQPAASTTASSARPALSVGLDEPGNERHTGFEEGVEAASRRVGDWGGEEEWNSTYTVRLALVPTTFVPHRLAQKMLFVGKVVRVLHQASPQSTSAQQSAPFAEWPSESGVKGDGLSTDL---SANVPGAGVVGAEGGGGMGVSEAEVLELTQRWSELCDREAFNLLALERAVHEAHALVDRRLYRLLVHVSGLEKHLSSLKGLFLMGHGALFHSFFDKAREAMHTP 1462
MLHE+L++L+G G + +E + S+ + TFR+ ++F+ +ERA I R++ +G YR+L F+ R + + F+ P GN+G+ +Y RA+ G+VE+L Y V +VE+++++DP LA V G+ ++ +LP + E A+ E L+G Q+L +LH+R H G P+++ + RL+WH QVL NQ SW+++G++ DP GEFF+Q+ + S H+ E ++ S + +WN + + L ++P ++ R+A+ +LF GK VRVL +P + Q F + S + G L G ++ + +SEA +E + EL F+ + E A++ + L++L+V + L HL +LK FL+ G F F +++R+ M P
Sbjct: 1 MLHELLLALVGCTGDFVIDERDLQEILPESAGPIPEYPDQPTFRLAPDLSFIHPSERAVIERLLPLGFYYRELDHFAAKHRNLSSFPLSKYFTLPQTPKLQKGNTGNAS-----IYCRAVANGIVEILSVYRTAVLQVEQNLLSDPMPILATVTKGLNKFDVLLPPLYELI----AEIESEDLRGGQLLNLLHKRCHCGVPELQACIQRLLWHGHQVLYNQLASWMIYGILQDPHGEFFIQRQGDKDVESELS-----------------HSDMSENLKQKSY---EHAALNDWNIGFHIFLEMLPN-YIHMRIAESILFAGKAVRVLR--NPSYSFRVQETIFQQHISRGSQRSQGPMGSLVLPKDPFQGKHLIAEDL---FPLSEANKIE--EMLQELKKLSEFHKRSFESAINSIRIIAANHLWQLVVIRADLNGHLKALKDYFLLAKGDFFQCFLEESRQLMRLP 432
BLAST of mRNA_S-latissima_F_contig103.268.1 vs. uniprot
Match: A0A078A0N9_STYLE (Spindle pole body component n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078A0N9_STYLE) HSP 1 Score: 165 bits (418), Expect = 9.160e-38 Identity = 239/1172 (20.39%), Postives = 419/1172 (35.75%), Query Frame = 2
Query: 89 MLHEVLVSLLGHPGSIIQEEPAISTTTTSSSASDGFKSGSTFRVPDTITFLTATERAAINRVVGIGSIYRDLRKFSRPKALLWVEGGFSAPGIDGN---SGHGRKEGD----------------GLYLRALKVGVVEVLDEYAGRVAEVERDVMADPTLTLARVYAGVREYTSILPAVAEACVAATADRERGRLKGAQVLEILHERSHFGAPDVRRRLCRLVWHCSQVLINQCVSWLLHGLIVDPCGEFFV-----------QKNAQPAASTTASSARPALSVGLDEPGNERHTGFEEGVEAASRRVGDWGGEEEWNSTYTVRLALVPTTFVPHRLAQKMLFVGKVVRVLHQASPQSTSAQQSAPFAEWPSESGVKGDGLSTDLSANVPGAGVVGAEGGGGMGVSEAEVLELTQRWSELCDREAFNLLALERAVHEAHALVDRRLYRLLVHVSGLEKHLSSLKGLFLMGHGALFHSFFDKAREAMHTPAGDRAVLDLNMWLAAAAEDNEGGHASLPSSESTLSRVVIALDPSGFTCKTFHDLTKQGFCVTGRARHSPNKSAVCLCPGGLDARSPPKRPPPSSAPAEAEAKPRSAGGSLWYASDRELPRGFTSSVAFRCDRPQLNAKGGAG-------------------------EEKVADPVGR----------------------------------------------SGSVSFVMHNHXXXXXXXXXXXXXXXXXXAAVPNSLSVQLEPDG----HGGGQVLLRWNPHLSPSLPPPEMSASIDVGGVSLDNPSEGRGLGLRT---LGRASLPRSCGLHLGQVNYLMVDYALGEARPTRKPRKASDKAAPSRKESGPSARLKVFVNDPGRSGSAS------LSVALDLWALIEMGGGRAFVGVSAEGPWRT---TLRQWDFRLGSAAAAGKASGPLGGVGSGPQVEKMVEAMDSWNGLCLDYRLEWPLHLILTRETMQIYNRLFRLLASVKRTSLELERVWPTLMQRRYRGEANNEKAWLGPLWMLRARMAFFVSNLAFYLQVDVVEAAHTVMKAKLETVRDFVSLQRAHQEMLSTLRAKFYLDNLDISQGLGRALRHVLRFCCLF--AVHGNAKNIIPAEVTSLHQAFQDEMKILMPVLERLAK---------ELAMRLDFNGHFSVE 3220
MLHE+L++L GH GSII E+ ++F V ++ FL+A E INR+ IG +++ ++ F + + + D N + + R E D G+Y++A GV ++L Y + +E + + D +LT+ + + Y I PA+ ++ D E LKG Q+L+ ++ + G P ++ ++++ C +VL +Q +W++HG +VD C EFF+ QK + S + +S+ N G ++ D ++EWNS YT+R++++P ++ P LA+K+LF+GK VRVL T +S +P +S+ E +Q +L N+L + R + E + RL L+V + L HL + + + H E P + ++ L + + L R I L F F L+ G G ++ +R G+LW+ + + GF ++ AF+ N KG G E+ + P GR S ++ F++ N + + ++ G H G LLR + + +L S+ +G + G+G+ +T L + + + ++Y+ E L+VFV D S LS + L I + G A++G + E +L W F E D WNGL LDYR WPLHL+ + + ++ YN LFR L +KR L+L+ VW T +++ + + + +LR M+F + NL YLQVDV+E+ + + + +DF ++ H + LS+L + +L+N + L + + H+ C F + + I E + F + + +L +L +RLD+N + S +
Sbjct: 1 MLHELLLALFGHTGSIIIEDQ------------------NSFTVNPSLDFLSAAEIEMINRIAQIGYLFKQVQIFQQRYGGISTKLAIRLAYDDLNQHMNQNQRGEHDQSNNSDDEDQKDDEIIGVYIKAFCSGVNDILTTYKQHLLAIEHEYLKDRSLTIPCLQQKLAIYLQIFPAI----ISLMEDIEDQGLKGGQLLDAIYHKCTTGNPVIKSMFNKILYCCHRVLFHQINAWIVHGQLVDLCEEFFIHKINTQAHGVNQKKEEAEESKLNQTVNSIMSIQ-----NLNLVGSILTMDPEGFGADDDTKDDEWNSVYTLRISMLPCSYFPPSLAEKILFIGKAVRVLQSKR---------------------------TQVSDRIP--------------ISDLEAF--SQAIMKLQKMPEINVLLISRIIEEIRESIASRLLHLVVIKANLIDHLKEARQIMAL------HPQSTSEFELNSGPL-QQTIIKLGL-----------------EEDPYLKRFKIKLRSFQFNFPNFSRLS--GLFYIGDVYIDNKRNHAFRIRSTKTSRK---------------------SGALWHCIKQRIDMGFKTTFAFKFRNMIANEKGNMGLNASVISGSIMGSPGKASTRNYLSQEQHFSIPQGRVITIILIYNQNFGGGQRFDQTINSIAGDEQMLGTNLNXXXXXXXSLSAALCFIIQNEKEVTSQKRSTPMGTSDLNSYISIKFLTNIQAFGGQLNHHGRTSLLRQQ-YQTQNLIQIWASSETSIGKIKAMIEDSGQGVQSKTEVLLAEKDISNDIDFIDADSHQIQIEYSNEE--------------------------LRVFVVDGQLSIHQDSQKILILSTQIKLNDYIRLDNGTAYLGFTHETLNMVNLVSLENWSFIS----------------------EARSNQQDPWNGLSLDYRSHWPLHLMFSPDVIEKYNTLFRFLLPIKRVQLDLQHVWSTKVRQM---KQYSHQPQFRQTMLLRQHMSFLMDNLFQYLQVDVLESQWSKLVKGINESQDFEEVRMLHDKYLSSLLEQCFLNNNNQVLKLLQDVIHMCHLLCKFFRQIDDQKPSEIEEEFNQIKYNFVIQSNKVFKLLSNFKNYHQSSPYLAQLLLRLDYNNYLSYQ 1003
BLAST of mRNA_S-latissima_F_contig103.268.1 vs. uniprot
Match: B9SAS5_RICCO (Gamma-tubulin complex component n=3 Tax=Ricinus communis TaxID=3988 RepID=B9SAS5_RICCO) HSP 1 Score: 160 bits (405), Expect = 1.090e-36 Identity = 150/548 (27.37%), Postives = 256/548 (46.72%), Query Frame = 2
Query: 89 MLHEVLVSLLGHPGSIIQEEPAISTTTTSSSASDGFKSGS-TFRVPDTITFLTATERAAINRVVGIGSIYRDLRKFS-RPKALLWVEGGFSAPGIDGN--SGHGRKEGDGLYLRALKVGVVEVLDEYAGRVAEVERDVMADPTLTLARVYAGVREYTSILPAVAEACVAATADRERGRLKGAQVLEILHERSHFGAPDVRRRLCRLVWHCSQVLINQCVSWLLHGLIVDPCGEFFVQKNAQPAASTTASSARPALSVGLDEPGNERHTGFEEGVEAASRRVGDWGGEEEWNSTYTVRLALVPTTFVPHRLAQKMLFVGKVVRVLHQASPQSTSAQQSAPFAEWPSESGVKGDGLSTDLSANVP-------GAGVVGAEGGGGMGVSEAEVLE-LTQRWSELCDREAFNLLALERAVHEAHALVDRRLYRLLVHVSGLEKHLSSLKGLFLMGHGALFHSFFDKAREAMHTPAGDR-AVLDLNMWLAAAAEDNEGGHASLPSSESTLSRVVIALDPSGFTCKTFH-DLTKQGFCVTGRARHSPNKSAVCL 1690
MLHE+L++LLG+ G +I +E + + D S +F++ I+F+ ++R I R++ +G YR+L +F+ + + L W+ +P N S + + +Y RA+ G+VE+L Y V +E+ ++++ LA V G+ ++ +LP + E + + ER ++G Q+L +LH+RSH G P+++ + RL+WH QV+ NQ SW+++G++ D GEFF+ + Q SSA+P +S E +R D +W+ + + L ++P ++ +A+ +LF GK +RVL SP + + S + P KG P + ++G E + SEA+ +E L Q E + F+ + E AV A+ L++L+V + L HL +LK FL+ G F F +++R+ M P A DL + AA G + SRV + + G T K+ DL K HS + S L
Sbjct: 1 MLHELLLALLGYTGDLIIDERGHQKSIGVHLSPDASISDERSFKLAPDISFIDPSDRDLIERIITLGFYYRELDRFATKSRNLSWIRSTNVSPLSRANELSSNNNTQKQSVYRRAIANGIVEILSVYRSAVLHIEQKLLSETVPILATVTQGLNKFFVLLPPLYELVL----EIERDDIRGGQLLNLLHKRSHCGVPELQTCIQRLLWHGHQVMYNQLASWMVYGILQDQHGEFFITR--QEDRDLVNSSAQPDMS------------------EKLARLSTDDISLTDWHLGFHIFLDMLPE-YIHMCVAESVLFAGKAIRVLRNPSP-AFQCKDSLHNQQVP-----KGGQNIQGFVGRFPVQKEPFVDSNLIGEEL---LPQSEADKIEALLQGLKESSE---FHKRSFESAVDSIRAIAASHLWQLVVVRADLNGHLKALKDYFLLAKGDFFQCFLEESRQLMRLPPRQSTAEADLMVPFQLAAIKTIGEE------DKYFSRVSLRMPSFGITVKSSQVDLPKS-------KAHSDSNSGAAL 498
BLAST of mRNA_S-latissima_F_contig103.268.1 vs. uniprot
Match: A0A2I0VYH5_9ASPA (Gamma-tubulin complex component n=2 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0VYH5_9ASPA) HSP 1 Score: 152 bits (383), Expect = 4.920e-34 Identity = 125/465 (26.88%), Postives = 218/465 (46.88%), Query Frame = 2
Query: 89 MLHEVLVSLLGHPGS-IIQEEPAISTTTTSSSASDGFKSGSTFRVPDTITFLTATERAAINRVVGIGSIYRDLRKFS-RPKALLWVEGGFSAPGIDGNSGHGRKEGDG-LYLRALKVGVVEVLDEYAGRVAEVERDVMADPTLTLARVYAGVREYTSILPAVAEACVAATADRERGRLKGAQVLEILHERSHFGAPDVRRRLCRLVWHCSQVLINQCVSWLLHGLIVDPCGEFFVQKNAQPAASTTASSARPALSVGLDEPGNERHTGFEEGVEAASRRVGDWGGEEEWNSTYTVRLALVPTTFVPHRLAQKMLFVGKVVRVLHQASPQ----STSAQQSAPFAEWPSESGVKGDGLSTDLSANVPGAGVVGAEGGGGMGVSEAEVLELTQRWSELCDREAFNLLALERAVHEAHALVDRRLYRLLVHVSGLEKHLSSLKGLFLMGHGALFHSFFDKAREAMHTP 1462
MLHE+L++L+G+ G +I E T SS F TF++ ++F+ +ER I R++ +G YR+L F+ + + L + P G +Y RA+ G++E+L Y V +VE+++++DP LA V G+ ++ +LP + E A+ ER ++G ++L +LH+R H G P+++ RL+WH QVL NQ SW+++G++ DP GEFF+Q+ D E + + E + + +WN + + L ++P ++ ++A+ +LF GK VRVL + + QQ ++ + G L L + G + + SEA+ +E + L F+ + E AV+ + L++L+V + L HL +LK FL+ G F F + +R+ M P
Sbjct: 1 MLHELLLALVGYTGDLVIDERDERETLFDSSDPISDFPVEPTFKLAPDLSFIQPSERDVIERLLPLGFYYRELDHFAAKHRHLSSFQLAKHYPHAQATEVQKESSGKASVYRRAIANGIIEILSVYRSAVLQVEQNLLSDPLPILATVTHGLNKFDVVLPPIYELI----AEIEREDIRGGKLLNLLHKRCHCGIPELQSCFQRLLWHGHQVLYNQLASWMVYGILQDPHGEFFIQRQ--------------------DHRDIENESSVSDTTEKLMYKSSENAALTDWNIGFHIFLEMLPE-YIHMQIAEAILFAGKAVRVLRNPTYSFRLHESIFQQHILRGAQRTQGSIGGFAL---LKDPLKGTNKIADDL---FPQSEADKIE--EMLLGLKQSSEFHKRSFESAVNSICTVAANHLWQLVVIRADLNGHLKALKDYFLLAKGDFFQCFLEGSRQLMRLP 432 The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig103.268.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Saccharina latissima female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-latissima_F_contig103.268.1 >prot_S-latissima_F_contig103.268.1 ID=prot_S-latissima_F_contig103.268.1|Name=mRNA_S-latissima_F_contig103.268.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=1047bp MLHEVLVSLLGHPGSIIQEEPAISTTTTSSSASDGFKSGSTFRVPDTITFback to top mRNA from alignment at S-latissima_F_contig103:419798..436309+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-latissima_F_contig103.268.1 ID=mRNA_S-latissima_F_contig103.268.1|Name=mRNA_S-latissima_F_contig103.268.1|organism=Saccharina latissima SLPER63f female|type=mRNA|length=16512bp|location=Sequence derived from alignment at S-latissima_F_contig103:419798..436309+ (Saccharina latissima SLPER63f female)back to top Coding sequence (CDS) from alignment at S-latissima_F_contig103:419798..436309+ >mRNA_S-latissima_F_contig103.268.1 ID=mRNA_S-latissima_F_contig103.268.1|Name=mRNA_S-latissima_F_contig103.268.1|organism=Saccharina latissima SLPER63f female|type=CDS|length=6282bp|location=Sequence derived from alignment at S-latissima_F_contig103:419798..436309+ (Saccharina latissima SLPER63f female)back to top |