mRNA_P-littoralis_Contig1653.1.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1653.1.1 vs. uniprot
Match: A0A6H5KT99_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT99_9PHAE) HSP 1 Score: 155 bits (393), Expect = 2.530e-40 Identity = 81/146 (55.48%), Postives = 102/146 (69.86%), Query Frame = 2
Query: 59 EGGLRGHFATWSPYRIADLHIKQLGFKEMPRPDVELTGVSGSSKLYQFMGISDQQE-SRGVGVGVQAAVENSAAIGGEKELLATPENWVVGQAFPSRLRA-SRKYELRVRQTSCYCSMCRVGAYEDCIPAIKYNTLVGMVKNRSGK 490
+GG GHF+TWSPYRI HIK LG +E+PRP V+LTG+SGSSKLYQFMG Q+E S GV V VQ +GGE E++ P W ++ + A +++Y+LRVRQ SCYCS C VGAY+DC+PA KY +VGMVK+ SGK
Sbjct: 751 DGG--GHFSTWSPYRIRRFHIKLLGHREIPRPFVDLTGISGSSKLYQFMGAEVQEEESSGVSVEVQKESGVPPLVGGENEVVVNPLRWQADESIVLTVPAVTKRYKLRVRQASCYCSKCSVGAYDDCVPAKKYEGMVGMVKDVSGK 894
BLAST of mRNA_P-littoralis_Contig1653.1.1 vs. uniprot
Match: A0A6H5JWW3_9PHAE (MULE domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWW3_9PHAE) HSP 1 Score: 155 bits (393), Expect = 2.840e-40 Identity = 81/146 (55.48%), Postives = 102/146 (69.86%), Query Frame = 2
Query: 59 EGGLRGHFATWSPYRIADLHIKQLGFKEMPRPDVELTGVSGSSKLYQFMGISDQQE-SRGVGVGVQAAVENSAAIGGEKELLATPENWVVGQAFPSRLRA-SRKYELRVRQTSCYCSMCRVGAYEDCIPAIKYNTLVGMVKNRSGK 490
+GG GHF+TWSPYRI HIK LG +E+PRP V+LTG+SGSSKLYQFMG Q+E S GV V VQ +GGE E++ P W ++ + A +++Y+LRVRQ SCYCS C VGAY+DC+PA KY +VGMVK+ SGK
Sbjct: 1375 DGG--GHFSTWSPYRIRRFHIKLLGHREIPRPFVDLTGISGSSKLYQFMGAEVQEEESSGVSVEVQKESGVPPLVGGENEVVVNPLRWQADESIVLTVPAVTKRYKLRVRQASCYCSKCSVGAYDDCVPAKKYEGMVGMVKDVSGK 1518
BLAST of mRNA_P-littoralis_Contig1653.1.1 vs. uniprot
Match: A0A6H5J993_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J993_9PHAE) HSP 1 Score: 146 bits (369), Expect = 1.410e-39 Identity = 77/146 (52.74%), Postives = 103/146 (70.55%), Query Frame = 2
Query: 59 EGGLRGHFATWSPYRIADLHIKQLGFKEMPRPDVELTGVSGSSKLYQFMGISDQQESRGVGVGVQAAVENSAA-IGGEKELLATPENWVVGQAFPSRLRA-SRKYELRVRQTSCYCSMCRVGAYEDCIPAIKYNTLVGMVKNRSGK 490
+GG GHF++WSPYR HIK LG++E+ RP V+LTG+SGSSK +QFMG ++ QE GVGV+ +EN +GGEKE++A P+ W ++ L A +++Y+LRVRQ SC+ S C VGAY DC+PA KY +VGMVK SGK
Sbjct: 159 DGG--GHFSSWSPYRTKRFHIKLLGYREITRPFVDLTGISGSSKQHQFMG-AEVQEEESSGVGVEVQLENDVPLVGGEKEVVANPQRWQADESTVLTLLAVTKRYKLRVRQASCHRSKCSVGAYNDCVPAKKYAGMVGMVKAVSGK 301
BLAST of mRNA_P-littoralis_Contig1653.1.1 vs. uniprot
Match: A0A6H5KXK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXK6_9PHAE) HSP 1 Score: 142 bits (357), Expect = 2.300e-37 Identity = 81/180 (45.00%), Postives = 111/180 (61.67%), Query Frame = 2
Query: 59 EGGLRGHFATWSPYRIADLHIKQLGFKEMPRPDVELTGVSGSSKLYQFMGISDQQE-SRGVGVGVQAAVENSAAIGGEKELLATPENWVVGQAFPSRLRA-SRKYELRVRQTSCYCSMCRVGAYEDCIPAIK-YNTLVGMVKNRSGKENPILESRSEDDPFVPPHTFVQF*YDACMLSKC 589
+GG GHF++WSPYRI HIK LG +E+PRP V+LTG+SGSSKLYQFMG Q+E S GVGV VQ + + +GGEKE++ P+ W ++ L A +++Y+LRVRQ SCYCS C VGAY+DC+P + +V + E+ +L P V ++ +C SKC
Sbjct: 148 DGG--GHFSSWSPYRIKRFHIKLLGHREIPRPFVDLTGISGSSKLYQFMGAEVQEEESSGVGVEVQKE-DGVSLVGGEKEVVVNPQRWQADESTVLTLPAVTKRYKLRVRQASCYCSKCSVGAYDDCVPLVGGEKEVVANPQRWQADESTVLTL-----PAVTKRYKLRVRQASCYCSKC 319
BLAST of mRNA_P-littoralis_Contig1653.1.1 vs. uniprot
Match: A0A6H5K491_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K491_9PHAE) HSP 1 Score: 140 bits (354), Expect = 2.000e-35 Identity = 73/132 (55.30%), Postives = 95/132 (71.97%), Query Frame = 2
Query: 59 EGGLRGHFATWSPYRIADLHIKQLGFKEMPRPDVELTGVSGSSKLYQFMGISDQQESRGVGVGVQAAVENSAA-IGGEKELLATPENWVVGQAFPSRL-RASRKYELRVRQTSCYCSMCRVGAYEDCIPAIK 448
+GG GHF++WSPYRI HIK LG +E+PRP V+LTG+SGSSKLYQFMG ++ QE GVGV+ EN +GGEKE++A P+ W ++ L +++Y+LRVRQ SCYCS C VGAY+DC+PA K
Sbjct: 485 DGG--GHFSSWSPYRIKRFHIKLLGHREIPRPFVDLTGISGSSKLYQFMG-AEVQEEESSGVGVEVQTENGVPLVGGEKEVVANPQRWQADESTVLTLPTVTKRYKLRVRQASCYCS-CSVGAYDDCVPAKK 612
BLAST of mRNA_P-littoralis_Contig1653.1.1 vs. uniprot
Match: A0A6H5KR28_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR28_9PHAE) HSP 1 Score: 131 bits (330), Expect = 2.990e-33 Identity = 74/139 (53.24%), Postives = 86/139 (61.87%), Query Frame = 2
Query: 74 GHFATWSPYRIADLHIKQLGFKEMPRPDVELTGVSGSSKLYQFMGISDQQESRGVGVGVQAAVENSAAIGGEKELLATPENWVVGQAFPSRLRASRKYELRVRQTSCYCSMCRVGAYEDCIPAIKYNTLVGMVKNRSGK 490
GHF+TW PYRI HIK LG +E+PRP V+LTG+SGSSKLYQFMG QQE GVGV+A E +L P +++YELRVRQ SC CS C VGAY+DC PA KY +VGMVK SGK
Sbjct: 151 GHFSTWFPYRIKSFHIKLLGHREIPRPIVDLTGISGSSKLYQFMGAEVQQEESS-GVGVEAD---------ESIVLTLPA-------------VTKRYELRVRQASCCCSKCSVGAYDDCFPARKYAGVVGMVKAVSGK 266
BLAST of mRNA_P-littoralis_Contig1653.1.1 vs. uniprot
Match: A0A6H5KXG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXG9_9PHAE) HSP 1 Score: 134 bits (338), Expect = 3.410e-33 Identity = 72/133 (54.14%), Postives = 90/133 (67.67%), Query Frame = 2
Query: 59 EGGLRGHFATWSPYRIADLHIKQLGFKEMPRPDVELTGVSGSSKLYQFMGISDQQE-SRGVGVGVQAAVENSAAIGGEKELLATPENWVVGQAFPSRLRA-SRKYELRVRQTSCYCSMCRVGAYEDCIPAIKY 451
+GG GHF+TWSPYRI HIK LG +E+PRP V+LTG+SGSSKLYQFMG Q+E S GV V VQ E ++A P+ W ++ L A +++Y+LRVRQ SCYCS C VGAY+DC+PA KY
Sbjct: 493 DGG--GHFSTWSPYRIRRFHIKLLGHREIPRPFVDLTGISGSSKLYQFMGAEVQEEESSGVSVEVQK----------ESGVVANPQRWQADESIVRTLPAVTKRYKLRVRQASCYCSKCSVGAYDDCVPAKKY 613
BLAST of mRNA_P-littoralis_Contig1653.1.1 vs. uniprot
Match: A0A6H5JJA7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJA7_9PHAE) HSP 1 Score: 122 bits (307), Expect = 8.000e-32 Identity = 64/140 (45.71%), Postives = 87/140 (62.14%), Query Frame = 2
Query: 74 GHFATWSPYRIADLHIKQLGFKEMPRPDVELTGVSGSSKLYQFMGISDQQESRGVGVGVQAAVENSAAIGGEKELLATPENWVVGQAFPSRLRASRKYELRVRQTSCYCSMCRVGAYEDCIPAIKYNTLVGMVKNRSGKE 493
G WSPY+IA+ ++ +G E+PRP V+LTG+ GSSKLYQFMG +Q++ +GV+ A + G + PE VVG A P + +RKY RVR+ SCYCS CRVG+Y DC+ A Y +VG V +SGK+
Sbjct: 34 GCLGKWSPYKIANFKMELIGANEIPRPRVDLTGIPGSSKLYQFMGAENQEQRLRSSLGVEPADSGVVVVAGNEHANPGPE--VVGPA-PRPEKVTRKYTCRVRKASCYCSKCRVGSYPDCMVAKNYPEIVGKVHEKSGKD 170
BLAST of mRNA_P-littoralis_Contig1653.1.1 vs. uniprot
Match: A0A6H5JJU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJU0_9PHAE) HSP 1 Score: 106 bits (265), Expect = 4.190e-25 Identity = 56/107 (52.34%), Postives = 74/107 (69.16%), Query Frame = 2
Query: 158 VELTGVSGSSKLYQFMGISDQQESRGVGVGVQAAVENSAAI-GGEKELLATPENWVVGQAFPSRLRA-SRKYELRVRQTSCYCSMCRVGAYEDCIPAIKYNTLVGMV 472
++LTG+SGSSKLYQFMG ++ QE GVGV+ EN + GGEKE++A P+ W ++ L A +++Y+LRVRQ SCYCS C VGAY+DC+PA KY V V
Sbjct: 112 LDLTGISGSSKLYQFMG-AEVQEEESSGVGVEVQTENGVPLEGGEKEVVANPQRWQADESTVLTLPAVTKRYKLRVRQASCYCSKCSVGAYDDCVPAKKYAGTVATV 217
BLAST of mRNA_P-littoralis_Contig1653.1.1 vs. uniprot
Match: A0A6H5KM72_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM72_9PHAE) HSP 1 Score: 102 bits (254), Expect = 4.620e-22 Identity = 55/112 (49.11%), Postives = 70/112 (62.50%), Query Frame = 2
Query: 155 DVELTGVSGSSKLYQFMGISDQQESRGVGVGVQAAVENSAAIGGEKELLATPENWVVGQAFPSRLRASRKYELRVRQTSCYCSMCRVGAYEDCIPAIKYNTLVGMVKNRSGK 490
D +LTG+SGSSKLYQFMG ++ QE GVGV+ EN + + +L P +++Y+LRVRQ SCYCS C VGAY+DC+PA KY +VGMVK SGK
Sbjct: 319 DSDLTGISGSSKLYQFMG-AEVQEEESSGVGVEVQKENGVLLADKSTVLTLPA-------------VTKRYKLRVRQASCYCSKCSVGAYDDCVPAKKYAGMVGMVKAVSGK 416 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1653.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1653.1.1 >prot_P-littoralis_Contig1653.1.1 ID=prot_P-littoralis_Contig1653.1.1|Name=mRNA_P-littoralis_Contig1653.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=140bp MPRPDVELTGVSGSSKLYQFMGISDQQESRGVGVGVQAAVENSAAIGGEKback to top mRNA from alignment at P-littoralis_Contig1653:700..1310- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1653.1.1 ID=mRNA_P-littoralis_Contig1653.1.1|Name=mRNA_P-littoralis_Contig1653.1.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=611bp|location=Sequence derived from alignment at P-littoralis_Contig1653:700..1310- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1653:700..1310- >mRNA_P-littoralis_Contig1653.1.1 ID=mRNA_P-littoralis_Contig1653.1.1|Name=mRNA_P-littoralis_Contig1653.1.1|organism=Pylaiella littoralis U1_48|type=CDS|length=420bp|location=Sequence derived from alignment at P-littoralis_Contig1653:700..1310- (Pylaiella littoralis U1_48)back to top |