mRNA_P-littoralis_Contig165.16.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig165.16.1
Unique NamemRNA_P-littoralis_Contig165.16.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig165.16.1 vs. uniprot
Match: D7G5C3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5C3_ECTSI)

HSP 1 Score: 456 bits (1172), Expect = 9.080e-150
Identity = 274/371 (73.85%), Postives = 297/371 (80.05%), Query Frame = 1
Query:   52 MTNLDEAQVRRAASALLKYVKSSAVGKPSLIEDDGEVVLAQISLHKIPDKVTAKPTPIAIPHPLRQREDCDMCLIVKDNAKAWVKEMQQKEPVEGLTKIIKLDKLRTQYKEFKDRRKLLSQHDLFLADDRILPMLTKALGKTFLKVKKQPVPISLERRSSLGKQIARARDSAFLVGSFGDCWAVKLANTAMTEDQVVENVMAGIGEVVENIPRKWKNVKAINIKCSNSVALPVYSNVGSLPPAPPVEQPVAVATDDADGDD-----GSNGQQKKRKPRPLIRQQLNKLKEEAKAQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEREGAGGKVKG-KAKSPKXXXXXAPGGSAVKTGKRRRTADA 1146
            M + DEAQVRRAA ALLK+V SSA GK SLIED+GEVVLAQISLHKIP  V AKP PIAIPHPLR+REDCDMCLIVKDNAK W+KEM +KEPVEGLTKIIKLDKLRTQYK+FKDRR+LLSQ DLFLADDRILPMLTKALGKTFLKVKKQPVPI LERR+S  KQIARARDSAFLVGS GDCWAVKLANT+MTEDQVVEN+M G+  VVE IPRKWKNVKAINIKCS+SVALPVYSN+G LPPAP  ++      ++A G+       S+ Q KKRKPRPLIRQQLNKLKEEAKA+K       XXXXXXXXXXXXXXXX          S REGAG KVK  KA SPK     A  GSA   G RR+T+ A
Sbjct:    1 MVSFDEAQVRRAARALLKHVNSSAAGKQSLIEDEGEVVLAQISLHKIPGDVKAKPVPIAIPHPLRKREDCDMCLIVKDNAKVWIKEMAEKEPVEGLTKIIKLDKLRTQYKDFKDRRELLSQFDLFLADDRILPMLTKALGKTFLKVKKQPVPIKLERRASFAKQIARARDSAFLVGSHGDCWAVKLANTSMTEDQVVENLMTGVAAVVEKIPRKWKNVKAINIKCSHSVALPVYSNIGDLPPAPSAKKATVAGKEEAAGEGEGKEPNSHSQAKKRKPRPLIRQQLNKLKEEAKAEKAASTAEAXXXXXXXXXXXXXXXXENEEPNVGGDSAREGAGRKVKKIKAISPK-----AASGSA---GNRRKTSVA 363          
BLAST of mRNA_P-littoralis_Contig165.16.1 vs. uniprot
Match: A0A7S2CVK6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CVK6_9STRA)

HSP 1 Score: 208 bits (530), Expect = 2.100e-56
Identity = 109/236 (46.19%), Postives = 153/236 (64.83%), Query Frame = 1
Query:   58 NLDEAQVRRAASALLKYVKSSAVGKPSLIEDDGEVVLAQISLHKIPDKVTAKPTPIAIPHPLRQREDCDMCLIVKDNAKAWVKEMQQKE-PVEGLTKIIKLDKLRTQYKEFKDRRKLLSQHDLFLADDRILPMLTKALGKTFLKVKKQPVPISLERRSSLGKQIARARDSAFLVGSFGDCWAVKLANTAMTEDQVVENVMAGIGEVVENIPRKWKNVKAINIKCSNSVALPVYSNV 762
            NL+   +  A  ALL + K  A  +  L   D E +L QI+L +IP   + KP  +++PHP+    DC MCL +K   K  VK +  ++ PVEGL KII LDKLRT Y  F  RR+LL+ +DLFLAD+RILPML KALGKTF   KKQP+P+ + R  SL  ++ RARDS  L+   G C AV + NT MT  ++V N++A     +E+IPRKWKN++AI +K ++S++LP+++ +
Sbjct:   57 NLNTHTITCAVKALLAFHKKKAESERKLPGADDERILIQITLQRIPGNSSPKPIQLSVPHPIHGDSDCQMCLFIKKEDKPLVKSLLMEDNPVEGLAKIITLDKLRTSYARFSQRRELLASYDLFLADERILPMLCKALGKTFFSRKKQPIPLCVTRHESLPHRVRRARDSTSLIIPSGTCVAVIVGNTNMTPKELVANIVAAASSAIEHIPRKWKNIQAIQVKTADSMSLPIFNKL 292          
BLAST of mRNA_P-littoralis_Contig165.16.1 vs. uniprot
Match: A0A7S2SVD8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVD8_9STRA)

HSP 1 Score: 196 bits (499), Expect = 1.040e-52
Identity = 114/228 (50.00%), Postives = 150/228 (65.79%), Query Frame = 1
Query:   82 RAASALLKYVKSSAVGKPSLIEDDGEVVLAQISLHKIPDKVTAKPTPIAIPHPLRQREDCDMCLIVKDNAKAWVKEM-QQKEPVEGLTKIIKLDKLRTQYKEFKDRRKLLSQHDLFLADDRILPMLTKALGKTFLKVKKQPVPISLERRSSLGKQIARARDSAFLVGSFGDCWAVKLANTAMTEDQVVENVMAGIGEVVENIPRKWKNVKAINIKCSNSVALPVYSNV 762
            +A  ALL Y + +      L+  + E V   I L K+P K + KP  + + HPL    DCDMCL +K   K WVKE+  + +PV GL K+I LDKLRT Y  F+ RR+L+S +DLFLADDRILPML K LGKTF   KKQPVP+ + RR +L + I RARDS +LV   G+  +V + NT+MT  Q+VEN++A   E V++IPRKW NV+AI IK  +SVALPV + +
Sbjct:    1 KAFDALLSYHEKAHAAGGDLLGSE-ERVHVTIVLKKVPSKASPKPIRLPLAHPLWSL-DCDMCLFMKTEDKPWVKELLMESKPVPGLKKVITLDKLRTSYARFERRRELISTYDLFLADDRILPMLCKTLGKTFFSRKKQPVPVRI-RRGALPQTIQRARDSTYLVLGGGNNVSVCIGNTSMTRKQLVENLLAATNEAVDHIPRKWANVQAIYIKSDSSVALPVLNKL 225          
BLAST of mRNA_P-littoralis_Contig165.16.1 vs. uniprot
Match: A0A024G4U6_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G4U6_9STRA)

HSP 1 Score: 181 bits (459), Expect = 1.480e-47
Identity = 99/233 (42.49%), Postives = 150/233 (64.38%), Query Frame = 1
Query:   61 LDEAQVRRAASALLKYVKSSAVG--KPSLIEDDGEVVLAQISLHKIPDKVTAKPTPIAIPHPLRQREDCDMCLIVKDNAKAWVKEMQQKEPVEGLTKIIKLDKLRTQYKEFKDRRKLLSQHDLFLADDRILPMLTKALGKTFLKVKKQPVPISLERRSSLGKQIARARDSAFLVGSFGDCWAVKLANTAMTEDQVVENVMAGIGEVVENIPRKWKNVKAINIKCSNSVALPVY 753
            +DEAQVR+A  AL  Y++       K  LIE++ + +   I   KIP K + KP PI +PH +R++ +  MCL+VKD  K  VK++ +++PVEGLTK++ L KLR  +  F+DRR L+  +DLFLADDRILP L   +GK F++VKKQPVP+ + R ++  + +       F+  S G C  +++A+  M+ DQ+VEN+M G+      I +KW  ++AI++K + SVALP+Y
Sbjct:    9 MDEAQVRKAVIALQIYIEKQKKDRTKQQLIEEN-QSLSCIIQRKKIPSKASLKPIPIELPHAIRKQPE--MCLLVKDTDKERVKKILKEDPVEGLTKVMTLKKLRKNFTRFEDRRTLVGAYDLFLADDRILPYLKSPVGKVFIRVKKQPVPVRISR-ANFTQNLRAVEKQTFMFVSCGACMNIRIAHFGMSVDQIVENIMVGMQRCASLIGKKWNGIQAIHLKTNESVALPIY 237          
BLAST of mRNA_P-littoralis_Contig165.16.1 vs. uniprot
Match: F0WX21_9STRA (Uncharacterized protein AlNc14C340G10778 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WX21_9STRA)

HSP 1 Score: 178 bits (452), Expect = 2.010e-46
Identity = 98/233 (42.06%), Postives = 148/233 (63.52%), Query Frame = 1
Query:   61 LDEAQVRRAASALLKYVKSSAV--GKPSLIEDDGEVVLAQISLHKIPDKVTAKPTPIAIPHPLRQREDCDMCLIVKDNAKAWVKEMQQKEPVEGLTKIIKLDKLRTQYKEFKDRRKLLSQHDLFLADDRILPMLTKALGKTFLKVKKQPVPISLERRSSLGKQIARARDSAFLVGSFGDCWAVKLANTAMTEDQVVENVMAGIGEVVENIPRKWKNVKAINIKCSNSVALPVY 753
            +DEAQVR+A  AL  Y +   +   K  LIE++  +    I   K+P K + KP PI +PH +R++ +  MCL+VKD  K  VK++ +++PVEGLTK++ L KLR  +  F+DRR L+  +DLFLADDRILP L   +GK F++VKKQPVP+ + R +   + +       F+  S G C  V++A+  M+ D++VEN+M G+      I +KW  ++AI++K + SVALP+Y
Sbjct:    9 MDEAQVRKAVLALQIYTEKQKLEQNKQPLIEENVSLSCI-IQRKKVPSKASLKPIPIELPHGIRKQSE--MCLLVKDTDKDRVKKILKEDPVEGLTKVMTLKKLRKNFARFEDRRTLVGAYDLFLADDRILPYLKSPVGKVFIRVKKQPVPVRISR-AKFTQNLRAVEKQTFMFVSCGACMNVRIAHLGMSVDEIVENIMIGMQRCASLIGKKWNGIQAIHLKTNESVALPIY 237          
BLAST of mRNA_P-littoralis_Contig165.16.1 vs. uniprot
Match: A0A6G0XX31_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XX31_9STRA)

HSP 1 Score: 183 bits (464), Expect = 2.540e-46
Identity = 96/236 (40.68%), Postives = 156/236 (66.10%), Query Frame = 1
Query:   61 LDEAQVRRAASALLKYV--KSSAVGKPSLIEDDGEVVLAQISLHKIPDKVTAKPTPIAIPHPLRQREDCDMCLIVKDNAKAWVKEMQQKEPVEGLTKIIKLDKLRTQYKEFKDRRKLLSQHDLFLADDRILPMLTKALGKTFLKVKKQPVPISLERRSSLGKQIARARDSAFLVGSFGDCWAVKLANTAMTEDQVVENVMAGIGEVVENIPRKWKNVKAINIKCSNSVALPVYSNV 762
            LD  QVR+A  AL +++  K S   K +L+ED+ +V+    + + +P K + KP PIA+P+ +R   D ++CL VKD+ K  +K   + +P+ GLTK++ + KL+  + +FKD+R+L + +DLFLADDRILP L   LGKTF   KKQP  +++  + ++   I R      +  S G C+ VK+A+  M  ++++EN++ G   +VE++P+KWKN+K+INIK S+SVALP+Y+++
Sbjct:    5 LDAEQVRKAVVALKQFIQKKKSQNSKQALVEDN-QVIQIIFTRNTVPAKESLKPVPIALPNNIRG--DGEVCLFVKDSDKDRIKAHLKNDPIPGLTKVMPVKKLKKNFSQFKDKRELKAAYDLFLADDRILPYLKSLLGKTFFDAKKQPTTVNVTGKKNISDHIRRVLAGTEMFVSPGPCFNVKIAHDGMDTEKIIENIIEGTKNIVEHVPKKWKNIKSINIKTSDSVALPIYNSL 237          
BLAST of mRNA_P-littoralis_Contig165.16.1 vs. uniprot
Match: A0A8H7ULE8_9FUNG (Uncharacterized protein n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7ULE8_9FUNG)

HSP 1 Score: 173 bits (438), Expect = 5.270e-45
Identity = 94/235 (40.00%), Postives = 155/235 (65.96%), Query Frame = 1
Query:   58 NLDEAQVRRAASALLKYVKSSAVGKPSLIEDDGEVVLAQISLHKIPDKVTAKPTPIAIPHPLRQREDCDMCLIVKDNAKAWVKEMQQKEPVEGLTKIIKLDKLRTQYKEFKDRRKLLSQHDLFLADDRILPMLTKALGKTFLKVKKQPVPISLERRSSLGKQIARARDSAFLVGSFGDCWAVKLANTAMTEDQVVENVMAGIGEVVENIPRKWKNVKAINIKCSNSVALPVYSNV 762
            NLD+ Q + A +AL+K+VKS       LIED+  + L  +   KIPD   A P  + + + + Q  D ++CL  KD  K + KE+   + V+ + K+I + KLR +YK F+ +RKL + + +FLADDR++P+L K LGK F   KKQP+P+ + ++S+L  +I +A  S ++  + G C A+K+  TA++E  + EN+MA + +V +NIP+KWKN+++INIK S+S++LP+Y+++
Sbjct:    2 NLDDKQTKSAVTALVKHVKSKNAN--DLIEDESVIWLI-VGTKKIPDTRKAMPKRLNLKYSVLQ-SDAEVCLFTKDPQKEF-KELLASKGVKRVNKVIGISKLRDKYKPFEAKRKLCAAYGMFLADDRVIPLLPKLLGKEFFLKKKQPIPVDM-KKSNLKAEIEKALSSTYMHLNGGSCSAIKVGTTALSEQHIFENIMAVVPQVADNIPKKWKNIQSINIKTSDSISLPIYNSL 230          
BLAST of mRNA_P-littoralis_Contig165.16.1 vs. uniprot
Match: W7TFQ3_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TFQ3_9STRA)

HSP 1 Score: 180 bits (456), Expect = 7.860e-45
Identity = 105/256 (41.02%), Postives = 154/256 (60.16%), Query Frame = 1
Query:   55 TNLDEAQVRRAASALLKY-------VKSSAVGKPSLIEDDGEVVLAQISLHKIPDKVTAKPTPIAIPHPLR-----QREDCDMCLIVKDNAKAWVKEMQQKEPVEGLTKIIKLDKLRTQYKEFKDRRKLLSQHDLFLADDRILPMLTKALGKTFLKVKKQPVPISL--------ERRSSLGKQIARARDSAFLVGSFGDCWAVKLANTAMTEDQVVENVMAGIGEVVENIPRKWKNVKAINIKCSNSVALPVYSNV 762
            + +D  Q  RA  ALL++       V S    +  L  + G+ +L QI+L KIP++V+ KP P+++PHPL        ED  +CLIVK++ K  V+       ++G+ +++ L +LRT YKEF++RR+L    DLFL DDRILP+L KALGKTF   KK PV + L        +  +++GK+I  A+    L  + G+C +VK+A T+    + V NV+AGI   VE  P KWKNV AI++K S+SVALP+Y  +
Sbjct:   52 SRVDATQATRAVEALLQHNARHQALVASKKSKQDLLASEAGDYILIQIALAKIPERVSPKPVPLSLPHPLHGSGGDDDEDHAVCLIVKESDKGKVQRALNAMKMDGVREVVGLQELRTDYKEFQERRQLRDAFDLFLVDDRILPLLGKALGKTFFSKKKHPVALKLGGLLSSNPQAMATVGKRIIAAQQRTHLYRNHGNCLSVKVAKTSFRPAEAVANVLAGIEAAVEATPGKWKNVMAISVKTSSSVALPLYQRL 307          
BLAST of mRNA_P-littoralis_Contig165.16.1 vs. uniprot
Match: A0A225WZF5_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WZF5_9STRA)

HSP 1 Score: 175 bits (444), Expect = 1.510e-44
Identity = 104/245 (42.45%), Postives = 148/245 (60.41%), Query Frame = 1
Query:   61 LDEAQVRRAASALLKYV--KSSAVGKPSLIEDDGEVVLAQISLHKIPDKVTAKPTPIAIPHPLRQREDCDMCLIVKDNAKAWVKEMQQKEPVEGLTKIIKLDKLRTQYKEFKDRRKLLSQHDLFLADDRILPMLTKALGKTFLKVKKQPVPISLERRSSLGKQIARARDSAFLVGSFGDCWAVKLANTAMTEDQVVENVMAGIGEVVENIPRKWKNVKAINIKCSNSVALPVYSNVGSLPPAPPV 789
            LDEAQVRRA  AL  +   K     K  L+ED  E +   ++   +P K + KP PI +PH L   E  ++CL VKD+ K  +KE+  K PV+G+TK++ + KLR  +  F+D+R L + +D+FLADDR+LP L  ALG  F   KKQP+ + + R+ +       AR +AF V S G C  VK+A   MT +Q+VEN+M  +      +P+ W  V++INIK S+SV+LPVY+ + SL   PPV
Sbjct:   14 LDEAQVRRAVLALQLFAAKKQEERAKTPLVEDV-EFLSCILTRKLVPAKASLKPIPITLPHALYD-ESAEICLFVKDDDKKRIKELLVKSPVQGVTKVMTVKKLRKNFSRFEDKRALAAAYDMFLADDRVLPYLKGALGTKFFIKKKQPIAVRVSRKDAANAVRLAARRTAFHV-SAGVCNNVKVARLDMTPEQIVENIMVAMNNCASLVPKGWNGVQSINIKTSDSVSLPVYNALASLAKLPPV 255          
BLAST of mRNA_P-littoralis_Contig165.16.1 vs. uniprot
Match: A0A0P1AN32_PLAHL (Low quality protein: ribosomal l1 domain-containing protein 1-like n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AN32_PLAHL)

HSP 1 Score: 173 bits (439), Expect = 4.080e-44
Identity = 97/245 (39.59%), Postives = 149/245 (60.82%), Query Frame = 1
Query:   61 LDEAQVRRAASALLKYV--KSSAVGKPSLIEDDGEVVLAQISLHKIPDKVTAKPTPIAIPHPLRQREDCDMCLIVKDNAKAWVKEMQQKEPVEGLTKIIKLDKLRTQYKEFKDRRKLLSQHDLFLADDRILPMLTKALGKTFLKVKKQPVPISLERRSSLGKQIARARDSAFLVGSFGDCWAVKLANTAMTEDQVVENVMAGIGEVVENIPRKWKNVKAINIKCSNSVALPVYSNVGSLPPAPPV 789
            LDEAQVRRA  AL ++   ++    K +L+ED  +++   ++   +P K + KP PI +PH +R  E  D+CL VKD  K  +KE   K+PV+G+TK++ + KLR  + +F+D+R L   +D+FLADDR++P L   LG  F   KKQP+ + + R++        A+ +AF V S G C  VK+A   MT +Q+V+N+M  +      +P+ W  V++IN+K  +SVALPVY+ +  L   PPV
Sbjct:   14 LDEAQVRRAVLALQQFAAKRNEKRTKTALVEDS-DLISCILTRKVVPAKASLKPIPITLPHAIRD-ESADICLFVKDEDKKRIKEALDKDPVQGVTKVMSVKKLRKNFSQFEDKRALAGAYDMFLADDRVIPYLKGPLGSKFFTKKKQPIAVRVSRKNVTSSLRLAAKRTAFHV-SAGVCQNVKVARLDMTIEQIVDNIMVAMNSCANLVPKGWNGVQSINLKLVDSVALPVYNALAPLAKLPPV 255          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig165.16.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5C3_ECTSI9.080e-15073.85Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2CVK6_9STRA2.100e-5646.19Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2SVD8_9STRA1.040e-5250.00Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A024G4U6_9STRA1.480e-4742.49Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
F0WX21_9STRA2.010e-4642.06Uncharacterized protein AlNc14C340G10778 n=1 Tax=A... [more]
A0A6G0XX31_9STRA2.540e-4640.68Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A8H7ULE8_9FUNG5.270e-4540.00Uncharacterized protein n=1 Tax=Umbelopsis vinacea... [more]
W7TFQ3_9STRA7.860e-4541.02Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A225WZF5_9STRA1.510e-4442.45Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
A0A0P1AN32_PLAHL4.080e-4439.59Low quality protein: ribosomal l1 domain-containin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig165contigP-littoralis_Contig165:70532..75303 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G5C3
Preferred nameRSL1D1
PFAMsRibosomal_L1
Model size2785
Max annot lvl2759|Eukaryota
KEGG koko:K11824,ko:K14775
KEGG Pathwayko04144,ko04721,ko04961,ko05016,map04144,map04721,map04961,map05016
Hectar predicted targeting categoryother localisation
GOsGO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003730,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0010941,GO:0015934,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0030684,GO:0030686,GO:0031974,GO:0031981,GO:0032879,GO:0032880,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042273,GO:0042981,GO:0043043,GO:0043067,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0048583,GO:0050789,GO:0050793,GO:0050794,GO:0065007,GO:0070013,GO:0071704,GO:0071840,GO:0080134,GO:0080135,GO:0090304,GO:0090342,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904,GO:2000772
Exons2
Evalue2.74e-158
EggNOG OGsKOG1685@1|root,KOG1685@2759|Eukaryota
Ec32 ortholog descriptionRibosomal protein L1-like
Ec32 orthologEc-14_006980.1
Descriptionregulation of cellular senescence
Cds size1098
COG categoryS
BRITEko00000,ko00001,ko03009,ko04131,ko04147
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789795.0772974-UTR-P-littoralis_Contig165:70531..721671680789795.0772974-UTR-P-littoralis_Contig165:70531..72167Pylaiella littoralis U1_48UTRP-littoralis_Contig165 70532..72167 -
1680789795.1095982-UTR-P-littoralis_Contig165:75252..753031680789795.1095982-UTR-P-littoralis_Contig165:75252..75303Pylaiella littoralis U1_48UTRP-littoralis_Contig165 75253..75303 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789795.0887043-CDS-P-littoralis_Contig165:72167..729711680789795.0887043-CDS-P-littoralis_Contig165:72167..72971Pylaiella littoralis U1_48CDSP-littoralis_Contig165 72168..72971 -
1680789795.0969505-CDS-P-littoralis_Contig165:74958..752521680789795.0969505-CDS-P-littoralis_Contig165:74958..75252Pylaiella littoralis U1_48CDSP-littoralis_Contig165 74959..75252 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig165.16.1prot_P-littoralis_Contig165.16.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig165 72168..75252 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig165.16.1

>prot_P-littoralis_Contig165.16.1 ID=prot_P-littoralis_Contig165.16.1|Name=mRNA_P-littoralis_Contig165.16.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=366bp
MTNLDEAQVRRAASALLKYVKSSAVGKPSLIEDDGEVVLAQISLHKIPDK
VTAKPTPIAIPHPLRQREDCDMCLIVKDNAKAWVKEMQQKEPVEGLTKII
KLDKLRTQYKEFKDRRKLLSQHDLFLADDRILPMLTKALGKTFLKVKKQP
VPISLERRSSLGKQIARARDSAFLVGSFGDCWAVKLANTAMTEDQVVENV
MAGIGEVVENIPRKWKNVKAINIKCSNSVALPVYSNVGSLPPAPPVEQPV
AVATDDADGDDGSNGQQKKRKPRPLIRQQLNKLKEEAKAQKAAAAEEVLA
AAAGTKRKKRAASENEEPKVVEEESEREGAGGKVKGKAKSPKAKSPKAPG
GSAVKTGKRRRTADA*
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mRNA from alignment at P-littoralis_Contig165:70532..75303-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig165.16.1 ID=mRNA_P-littoralis_Contig165.16.1|Name=mRNA_P-littoralis_Contig165.16.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4772bp|location=Sequence derived from alignment at P-littoralis_Contig165:70532..75303- (Pylaiella littoralis U1_48)
GCGCTCCGCCCTCCTCGACCTCACACACAGCAGGCAGAGGTCAAAGCGAA CATGACCAACCTCGACGAAGCTCAAGTGCGACGCGCGGCCAGCGCCTTGC TAAAGTATGTCAAGAGCTCTGCAGTCGGGAAGCCGAGTTTAATCGAGGAC GATGGAGAGGTGGTTCTAGCTCAAATATCTCTCCACAAGATCCCGGACAA AGTTACCGCCAAGCCGACCCCGATCGCGATACCGCACCCTCTGCGGCAAC GAGAGGACTGTGACATGTGCCTCATCGTGAAGGACAACGCGAAGGCATGG GTTAAGGAGATGCAACAGAAGGAGCCGGTGGAAGGCTTGACCAAGGTATG CTAGTCTTAGCATAGGTGCATAGGCGCGGGACTGTTTTTTTTTTTTGTTG CCAAACCCCCGAACTCTGCGACCACCCGAACCACATGTTGCAGAGAGTAC AACCGAGAGCATTACAGTTAGGATGACAACACAGCAGTGTATACAGCAGG AGTACGTGCCAGTCTCGTACCATTGGCATGCACATTGCGACGTGTTGGTT GGGTGCGAAATCCTCCTGCTGCCATTTGTAAAAAGTACCACTCAGTGTCT TCATTTAACATGTATCGCCTCATTATTTCGTTATTTCTCTTTCCAGTCGA CGGAGTGCTGTCCCTAGTGCATGTATTCTTCAAATCACGACAGCATTACA GCAGTACATGTAGGGTCTTTATTTCGATGCGGCCCAACCCCTCGATCCGT GGAATAAAGCCCGAAACGCCAAGAGACCAAGTTTCTTGTGGTTTCCTCCC CCGTCGTACGAGAAAAATACACGTCACCAAAATTTTTGTGAAAACTCATT TTCGACGATCGGGGAATTTCTCAGGCTTCCCACAAACACACCTAAACCCT AAACCCACCCCACCAGCAGCCACAGCAGTACAAACGGTAGTACGAAGAAT GGCGCTCCCTAGAGCAACGCACTGGCAAGGGAATGCACCCCTGATGTGAG CATTTGAGCAGGTGTGGCCAGAGATTGGTGAAGAGGATGCAAACAGTACG AGTCAGAATCTGCCCGAGCCCTAGTTCCGCCGCTGTCCGCCTTTTTTTAC CAACACACACATCCTTCTCGCATCCCGTCTCTGGTCGGCACATAAGCCAT CACTACTCTGTACCGTAGAGGAATCGTCATCGAGGGCTAAGACCATGTAG GCCTCCATTCCGAAAGAATCAGGGCTTTGGAGGCCTCCAAGCTCTGTTGC TGTCTGATGGCGTGTGAAGTTCAGCCTCTGTGATTCCTACGCGAAAAACA CCGTGTATGTCCGGGGTTTTGAACCAACCTCATCAACACACTCCTTGCCG CAACGCTTCTTTGGCGAGCGCACAAGCTATGACCACTGCGAAGAGACAGC GGAACCGATGGGCGGTATAATGTAGGCCTTTATTTCGAAAGAATGACCTT TATTTCGAAAGAATGGGGAGGCCTTCAAGTTCTGTTACTGTCTGGAGTCA GTTTGATTGTTTTTCCCACTTTCGAGCACCATTTCAAATGACAAAAACGA GATATTTTCATTCCTCGTTTCGGGCTATTCATTCATGGATCGGAAGATTG GGCCGCATCCATGATAAAGCCTGCTGTATGGTACAGCAGTAGTTGGTTTT GCGGTTAGCCCTGTCCTTGATTACTCCAGACCCTCTTGTAGTCAACCCCG TTCTCGTTTTTGTACATCCCGCGGAGCACACAGCAGCCATGTGATTCCTA GGCTGTGCCGTGGCTGCGCTAGCCTCTGTCGTGTCCACTGGCAGCAAATA CGCCAATCCACCCGAAAAGTGGTAGCTTTACGAGCACGAAGCAAGACAAC CCCCCACCCAATTCGATTCCGCACCACCCGTCCCCCCCCCCAGTTCGTAG CTTGGAGTACCAGGTGTTGAAGGTTATCGGAGTACAGGAGTAGTTCAGGT TCGAAAAATGAAAGCTTTCTTCTTCTACAGTACCTCACACATGTGTGCAC GTCGATTTAGTATTGCACGTGCCTGTGGCACCACTTGCAGCTCGCGCAAG AACCCTAAAATATCCTCAACATCATTATTGGTACATTCTTCACAGCGGTA TGATAGTTAAAGCTTAAAGCTACTCATTGTTGCAACAATTGCAGCACTAT ATTGTCTTCGGCGCTCGAAATCTACGAGGTATTTTCTTGTCGTTCTTTCT CAACTTGATCAACCTATTGATATCTTCCAGCATTTTGTCTGTTGCAAGCA CTGACAGATTTATTATGTGCCCCATGGCTTGCCTTCCCCCCTCACGCATT TGCTGTGCTCTCAATATCCCTTCTCCTTGCAGATCATCAAGCTGGACAAG CTTCGCACCCAGTACAAAGAGTTCAAAGACCGCCGAAAGCTCTTGTCTCA GCACGACCTCTTTCTGGCCGACGACCGCATCCTGCCGATGCTCACGAAGG CGCTCGGGAAGACGTTCCTCAAAGTCAAGAAGCAGCCCGTGCCGATATCG CTCGAACGCCGGTCATCTCTCGGTAAGCAGATCGCCCGCGCGAGAGACAG CGCTTTCTTGGTGGGGTCGTTTGGGGACTGTTGGGCCGTAAAGCTGGCTA ACACGGCAATGACGGAGGACCAGGTCGTGGAGAACGTCATGGCCGGGATC GGGGAGGTGGTAGAAAATATCCCGCGGAAGTGGAAGAACGTCAAGGCCAT CAATATCAAGTGCTCCAATTCGGTGGCGTTACCGGTATACAGCAACGTCG GCAGCCTCCCTCCCGCACCTCCGGTTGAGCAGCCGGTGGCGGTGGCAACG GATGACGCGGACGGTGACGACGGGTCTAATGGTCAACAAAAGAAGCGCAA GCCGAGGCCGCTAATCCGGCAGCAGCTCAACAAGCTCAAGGAAGAAGCGA AGGCGCAGAAGGCGGCGGCGGCGGAGGAAGTATTGGCGGCGGCCGCAGGG ACGAAACGAAAGAAGAGGGCAGCCTCGGAGAACGAGGAGCCGAAGGTGGT GGAAGAAGAGAGTGAGCGGGAAGGGGCAGGTGGGAAGGTTAAGGGAAAGG CGAAGTCGCCCAAGGCGAAGTCGCCCAAGGCGCCAGGCGGGAGTGCGGTC AAGACAGGGAAGAGGCGACGGACGGCTGACGCGTAGTTAACACCGGCGTA CCGGGTCTACAGTAGTACGTGGCGAGGGCCCACCAACAAGATTTGATGCC GACTGCAGTGGGTAATATCGTATCGTTTATTTTACTGCCTCTTTTCTCAC GAGCTGCGCCCGTGGTTCCTTCGACTGCAGGGAGATACCGTTTAGTATCG CACTGATATTTGGTGAAGGGAGTGCTGTATTCCGTAGGTGCAACTGTTGT GTTCCGTTTGTTAATCCCATATTTTTAGTGTGGTAAGTTGTGTTGTGACA GATGACTGAGTTATCAAGATGGTACCATGCATGTTGCGGTATGACTTTTG TGTCTGCACCATCCTGGGTGGATTTCTCCCTCTGCAGTGCGGGGCCATGC AGCGGTACTGCTGCCTTCCTTATGCACTGCTCTTTTTTTGTTTGTGAGGG CATTGCCCCATCTGCTTTGATAACCTTTCCTGGGTTTTCCTTGGTGCTGT CTGGCTCTTACCCTCCTCTCATAACTGCCGTTTGGCGTACACCATCCTCA ATCACAGCTGAGCTTTGATTTTCGCCGTGATAATGGTGGAGCGTGCGTTG CCATGAACTGTTTTTTGTGTATCCTGACAAGAATCAACTATTGTTGGTGC CTCTTAGCACTTGTTTTTATAAGCCAATGATGTGCAGGTGCCAAATCCAG CCGTTCAGTCAGCGAAACACAGATTCGGGGCACGGTCCGCGTACTTATTT GATGGGCCGGTTCACTGCTATTACTTGTGAAGCGGATTACTGGTATCACC CGGGTGAAAAATGAAACAATCATGAACAGATTCCAATGTTTTCCTCCCAC CCATGCTGCGCGTCTCAAGATTTGTCGCGTTCCACACTCGCATGCAGCCT GATTTTTTATACGGTGGGGTTGTGTACTTTGTTTAGGCCCTGTGTTCACG ACAATCAGGAAAGCAAAATTGAAAAAATCAAAATAGCAAAATCAAAGTTT GATTTTACGAAAAACACTGCGACCCACATTAACGGACCAGCTTGGTAGAG GCCTGTAAACGCCGTCGAGATCCAAAACCTCTGATTGATGATGTCACCAT CGATCGGCAATGCTGTGAACATAACAACAGCAGCAGCAGTACAGATACTA CCATGTTTCGGAGCAGCACTGCACGCTGATACTGCGTCGCTGAGAGACAC CACGTTTGTTTCTGTGTCTGTCGGTTTGTGTGTTGGCCCATAATGGACTC GAGACTGCTGTGGTACGCGTCTGTCTGCTGTTGTTTGGCTGTCGTTGTCC TGCTCTAGGTGTTGTCTAGTGCCTGATCGTGCGGGTCTGTCTTTGTTTTG CTCTACGTGTGCCTCTCTCTCTCGCCGTGTTCTGTGGCTTGCGTCGGCGT GCCCTGTGCCTCTGTCTGCTTGTCTCTGGTGTGGTGCGCGAGCCACATCG TTCAGAAAGCCTTCGATCGGGTTTAGTCCCCCAATTTTGATTTTGATTTT CTGGCAATTTAGTCTTTTGGGACTTCTTTGGTCTGCCGGTGATGTCCAAG AAATCAAAGTTGTCGTTGGTAGGTCTTGAGAGCCTCGACCAATCAGATCC CAATTTTGATTTTGATTCTTTCCAATTTTGATTTCCTGAACAGTGTTAAT ACAGGGCCTTGCGCTGATCGTG
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Coding sequence (CDS) from alignment at P-littoralis_Contig165:70532..75303-

>mRNA_P-littoralis_Contig165.16.1 ID=mRNA_P-littoralis_Contig165.16.1|Name=mRNA_P-littoralis_Contig165.16.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1098bp|location=Sequence derived from alignment at P-littoralis_Contig165:70532..75303- (Pylaiella littoralis U1_48)
ATGACCAACCTCGACGAAGCTCAAGTGCGACGCGCGGCCAGCGCCTTGCT
AAAGTATGTCAAGAGCTCTGCAGTCGGGAAGCCGAGTTTAATCGAGGACG
ATGGAGAGGTGGTTCTAGCTCAAATATCTCTCCACAAGATCCCGGACAAA
GTTACCGCCAAGCCGACCCCGATCGCGATACCGCACCCTCTGCGGCAACG
AGAGGACTGTGACATGTGCCTCATCGTGAAGGACAACGCGAAGGCATGGG
TTAAGGAGATGCAACAGAAGGAGCCGGTGGAAGGCTTGACCAAGATCATC
AAGCTGGACAAGCTTCGCACCCAGTACAAAGAGTTCAAAGACCGCCGAAA
GCTCTTGTCTCAGCACGACCTCTTTCTGGCCGACGACCGCATCCTGCCGA
TGCTCACGAAGGCGCTCGGGAAGACGTTCCTCAAAGTCAAGAAGCAGCCC
GTGCCGATATCGCTCGAACGCCGGTCATCTCTCGGTAAGCAGATCGCCCG
CGCGAGAGACAGCGCTTTCTTGGTGGGGTCGTTTGGGGACTGTTGGGCCG
TAAAGCTGGCTAACACGGCAATGACGGAGGACCAGGTCGTGGAGAACGTC
ATGGCCGGGATCGGGGAGGTGGTAGAAAATATCCCGCGGAAGTGGAAGAA
CGTCAAGGCCATCAATATCAAGTGCTCCAATTCGGTGGCGTTACCGGTAT
ACAGCAACGTCGGCAGCCTCCCTCCCGCACCTCCGGTTGAGCAGCCGGTG
GCGGTGGCAACGGATGACGCGGACGGTGACGACGGGTCTAATGGTCAACA
AAAGAAGCGCAAGCCGAGGCCGCTAATCCGGCAGCAGCTCAACAAGCTCA
AGGAAGAAGCGAAGGCGCAGAAGGCGGCGGCGGCGGAGGAAGTATTGGCG
GCGGCCGCAGGGACGAAACGAAAGAAGAGGGCAGCCTCGGAGAACGAGGA
GCCGAAGGTGGTGGAAGAAGAGAGTGAGCGGGAAGGGGCAGGTGGGAAGG
TTAAGGGAAAGGCGAAGTCGCCCAAGGCGAAGTCGCCCAAGGCGCCAGGC
GGGAGTGCGGTCAAGACAGGGAAGAGGCGACGGACGGCTGACGCGTAG
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