mRNA_P-littoralis_Contig165.16.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig165.16.1 vs. uniprot
Match: D7G5C3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5C3_ECTSI) HSP 1 Score: 456 bits (1172), Expect = 9.080e-150 Identity = 274/371 (73.85%), Postives = 297/371 (80.05%), Query Frame = 1
Query: 52 MTNLDEAQVRRAASALLKYVKSSAVGKPSLIEDDGEVVLAQISLHKIPDKVTAKPTPIAIPHPLRQREDCDMCLIVKDNAKAWVKEMQQKEPVEGLTKIIKLDKLRTQYKEFKDRRKLLSQHDLFLADDRILPMLTKALGKTFLKVKKQPVPISLERRSSLGKQIARARDSAFLVGSFGDCWAVKLANTAMTEDQVVENVMAGIGEVVENIPRKWKNVKAINIKCSNSVALPVYSNVGSLPPAPPVEQPVAVATDDADGDD-----GSNGQQKKRKPRPLIRQQLNKLKEEAKAQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEREGAGGKVKG-KAKSPKXXXXXAPGGSAVKTGKRRRTADA 1146
M + DEAQVRRAA ALLK+V SSA GK SLIED+GEVVLAQISLHKIP V AKP PIAIPHPLR+REDCDMCLIVKDNAK W+KEM +KEPVEGLTKIIKLDKLRTQYK+FKDRR+LLSQ DLFLADDRILPMLTKALGKTFLKVKKQPVPI LERR+S KQIARARDSAFLVGS GDCWAVKLANT+MTEDQVVEN+M G+ VVE IPRKWKNVKAINIKCS+SVALPVYSN+G LPPAP ++ ++A G+ S+ Q KKRKPRPLIRQQLNKLKEEAKA+K XXXXXXXXXXXXXXXX S REGAG KVK KA SPK A GSA G RR+T+ A
Sbjct: 1 MVSFDEAQVRRAARALLKHVNSSAAGKQSLIEDEGEVVLAQISLHKIPGDVKAKPVPIAIPHPLRKREDCDMCLIVKDNAKVWIKEMAEKEPVEGLTKIIKLDKLRTQYKDFKDRRELLSQFDLFLADDRILPMLTKALGKTFLKVKKQPVPIKLERRASFAKQIARARDSAFLVGSHGDCWAVKLANTSMTEDQVVENLMTGVAAVVEKIPRKWKNVKAINIKCSHSVALPVYSNIGDLPPAPSAKKATVAGKEEAAGEGEGKEPNSHSQAKKRKPRPLIRQQLNKLKEEAKAEKAASTAEAXXXXXXXXXXXXXXXXENEEPNVGGDSAREGAGRKVKKIKAISPK-----AASGSA---GNRRKTSVA 363
BLAST of mRNA_P-littoralis_Contig165.16.1 vs. uniprot
Match: A0A7S2CVK6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CVK6_9STRA) HSP 1 Score: 208 bits (530), Expect = 2.100e-56 Identity = 109/236 (46.19%), Postives = 153/236 (64.83%), Query Frame = 1
Query: 58 NLDEAQVRRAASALLKYVKSSAVGKPSLIEDDGEVVLAQISLHKIPDKVTAKPTPIAIPHPLRQREDCDMCLIVKDNAKAWVKEMQQKE-PVEGLTKIIKLDKLRTQYKEFKDRRKLLSQHDLFLADDRILPMLTKALGKTFLKVKKQPVPISLERRSSLGKQIARARDSAFLVGSFGDCWAVKLANTAMTEDQVVENVMAGIGEVVENIPRKWKNVKAINIKCSNSVALPVYSNV 762
NL+ + A ALL + K A + L D E +L QI+L +IP + KP +++PHP+ DC MCL +K K VK + ++ PVEGL KII LDKLRT Y F RR+LL+ +DLFLAD+RILPML KALGKTF KKQP+P+ + R SL ++ RARDS L+ G C AV + NT MT ++V N++A +E+IPRKWKN++AI +K ++S++LP+++ +
Sbjct: 57 NLNTHTITCAVKALLAFHKKKAESERKLPGADDERILIQITLQRIPGNSSPKPIQLSVPHPIHGDSDCQMCLFIKKEDKPLVKSLLMEDNPVEGLAKIITLDKLRTSYARFSQRRELLASYDLFLADERILPMLCKALGKTFFSRKKQPIPLCVTRHESLPHRVRRARDSTSLIIPSGTCVAVIVGNTNMTPKELVANIVAAASSAIEHIPRKWKNIQAIQVKTADSMSLPIFNKL 292
BLAST of mRNA_P-littoralis_Contig165.16.1 vs. uniprot
Match: A0A7S2SVD8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVD8_9STRA) HSP 1 Score: 196 bits (499), Expect = 1.040e-52 Identity = 114/228 (50.00%), Postives = 150/228 (65.79%), Query Frame = 1
Query: 82 RAASALLKYVKSSAVGKPSLIEDDGEVVLAQISLHKIPDKVTAKPTPIAIPHPLRQREDCDMCLIVKDNAKAWVKEM-QQKEPVEGLTKIIKLDKLRTQYKEFKDRRKLLSQHDLFLADDRILPMLTKALGKTFLKVKKQPVPISLERRSSLGKQIARARDSAFLVGSFGDCWAVKLANTAMTEDQVVENVMAGIGEVVENIPRKWKNVKAINIKCSNSVALPVYSNV 762
+A ALL Y + + L+ + E V I L K+P K + KP + + HPL DCDMCL +K K WVKE+ + +PV GL K+I LDKLRT Y F+ RR+L+S +DLFLADDRILPML K LGKTF KKQPVP+ + RR +L + I RARDS +LV G+ +V + NT+MT Q+VEN++A E V++IPRKW NV+AI IK +SVALPV + +
Sbjct: 1 KAFDALLSYHEKAHAAGGDLLGSE-ERVHVTIVLKKVPSKASPKPIRLPLAHPLWSL-DCDMCLFMKTEDKPWVKELLMESKPVPGLKKVITLDKLRTSYARFERRRELISTYDLFLADDRILPMLCKTLGKTFFSRKKQPVPVRI-RRGALPQTIQRARDSTYLVLGGGNNVSVCIGNTSMTRKQLVENLLAATNEAVDHIPRKWANVQAIYIKSDSSVALPVLNKL 225
BLAST of mRNA_P-littoralis_Contig165.16.1 vs. uniprot
Match: A0A024G4U6_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G4U6_9STRA) HSP 1 Score: 181 bits (459), Expect = 1.480e-47 Identity = 99/233 (42.49%), Postives = 150/233 (64.38%), Query Frame = 1
Query: 61 LDEAQVRRAASALLKYVKSSAVG--KPSLIEDDGEVVLAQISLHKIPDKVTAKPTPIAIPHPLRQREDCDMCLIVKDNAKAWVKEMQQKEPVEGLTKIIKLDKLRTQYKEFKDRRKLLSQHDLFLADDRILPMLTKALGKTFLKVKKQPVPISLERRSSLGKQIARARDSAFLVGSFGDCWAVKLANTAMTEDQVVENVMAGIGEVVENIPRKWKNVKAINIKCSNSVALPVY 753
+DEAQVR+A AL Y++ K LIE++ + + I KIP K + KP PI +PH +R++ + MCL+VKD K VK++ +++PVEGLTK++ L KLR + F+DRR L+ +DLFLADDRILP L +GK F++VKKQPVP+ + R ++ + + F+ S G C +++A+ M+ DQ+VEN+M G+ I +KW ++AI++K + SVALP+Y
Sbjct: 9 MDEAQVRKAVIALQIYIEKQKKDRTKQQLIEEN-QSLSCIIQRKKIPSKASLKPIPIELPHAIRKQPE--MCLLVKDTDKERVKKILKEDPVEGLTKVMTLKKLRKNFTRFEDRRTLVGAYDLFLADDRILPYLKSPVGKVFIRVKKQPVPVRISR-ANFTQNLRAVEKQTFMFVSCGACMNIRIAHFGMSVDQIVENIMVGMQRCASLIGKKWNGIQAIHLKTNESVALPIY 237
BLAST of mRNA_P-littoralis_Contig165.16.1 vs. uniprot
Match: F0WX21_9STRA (Uncharacterized protein AlNc14C340G10778 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WX21_9STRA) HSP 1 Score: 178 bits (452), Expect = 2.010e-46 Identity = 98/233 (42.06%), Postives = 148/233 (63.52%), Query Frame = 1
Query: 61 LDEAQVRRAASALLKYVKSSAV--GKPSLIEDDGEVVLAQISLHKIPDKVTAKPTPIAIPHPLRQREDCDMCLIVKDNAKAWVKEMQQKEPVEGLTKIIKLDKLRTQYKEFKDRRKLLSQHDLFLADDRILPMLTKALGKTFLKVKKQPVPISLERRSSLGKQIARARDSAFLVGSFGDCWAVKLANTAMTEDQVVENVMAGIGEVVENIPRKWKNVKAINIKCSNSVALPVY 753
+DEAQVR+A AL Y + + K LIE++ + I K+P K + KP PI +PH +R++ + MCL+VKD K VK++ +++PVEGLTK++ L KLR + F+DRR L+ +DLFLADDRILP L +GK F++VKKQPVP+ + R + + + F+ S G C V++A+ M+ D++VEN+M G+ I +KW ++AI++K + SVALP+Y
Sbjct: 9 MDEAQVRKAVLALQIYTEKQKLEQNKQPLIEENVSLSCI-IQRKKVPSKASLKPIPIELPHGIRKQSE--MCLLVKDTDKDRVKKILKEDPVEGLTKVMTLKKLRKNFARFEDRRTLVGAYDLFLADDRILPYLKSPVGKVFIRVKKQPVPVRISR-AKFTQNLRAVEKQTFMFVSCGACMNVRIAHLGMSVDEIVENIMIGMQRCASLIGKKWNGIQAIHLKTNESVALPIY 237
BLAST of mRNA_P-littoralis_Contig165.16.1 vs. uniprot
Match: A0A6G0XX31_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XX31_9STRA) HSP 1 Score: 183 bits (464), Expect = 2.540e-46 Identity = 96/236 (40.68%), Postives = 156/236 (66.10%), Query Frame = 1
Query: 61 LDEAQVRRAASALLKYV--KSSAVGKPSLIEDDGEVVLAQISLHKIPDKVTAKPTPIAIPHPLRQREDCDMCLIVKDNAKAWVKEMQQKEPVEGLTKIIKLDKLRTQYKEFKDRRKLLSQHDLFLADDRILPMLTKALGKTFLKVKKQPVPISLERRSSLGKQIARARDSAFLVGSFGDCWAVKLANTAMTEDQVVENVMAGIGEVVENIPRKWKNVKAINIKCSNSVALPVYSNV 762
LD QVR+A AL +++ K S K +L+ED+ +V+ + + +P K + KP PIA+P+ +R D ++CL VKD+ K +K + +P+ GLTK++ + KL+ + +FKD+R+L + +DLFLADDRILP L LGKTF KKQP +++ + ++ I R + S G C+ VK+A+ M ++++EN++ G +VE++P+KWKN+K+INIK S+SVALP+Y+++
Sbjct: 5 LDAEQVRKAVVALKQFIQKKKSQNSKQALVEDN-QVIQIIFTRNTVPAKESLKPVPIALPNNIRG--DGEVCLFVKDSDKDRIKAHLKNDPIPGLTKVMPVKKLKKNFSQFKDKRELKAAYDLFLADDRILPYLKSLLGKTFFDAKKQPTTVNVTGKKNISDHIRRVLAGTEMFVSPGPCFNVKIAHDGMDTEKIIENIIEGTKNIVEHVPKKWKNIKSINIKTSDSVALPIYNSL 237
BLAST of mRNA_P-littoralis_Contig165.16.1 vs. uniprot
Match: A0A8H7ULE8_9FUNG (Uncharacterized protein n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7ULE8_9FUNG) HSP 1 Score: 173 bits (438), Expect = 5.270e-45 Identity = 94/235 (40.00%), Postives = 155/235 (65.96%), Query Frame = 1
Query: 58 NLDEAQVRRAASALLKYVKSSAVGKPSLIEDDGEVVLAQISLHKIPDKVTAKPTPIAIPHPLRQREDCDMCLIVKDNAKAWVKEMQQKEPVEGLTKIIKLDKLRTQYKEFKDRRKLLSQHDLFLADDRILPMLTKALGKTFLKVKKQPVPISLERRSSLGKQIARARDSAFLVGSFGDCWAVKLANTAMTEDQVVENVMAGIGEVVENIPRKWKNVKAINIKCSNSVALPVYSNV 762
NLD+ Q + A +AL+K+VKS LIED+ + L + KIPD A P + + + + Q D ++CL KD K + KE+ + V+ + K+I + KLR +YK F+ +RKL + + +FLADDR++P+L K LGK F KKQP+P+ + ++S+L +I +A S ++ + G C A+K+ TA++E + EN+MA + +V +NIP+KWKN+++INIK S+S++LP+Y+++
Sbjct: 2 NLDDKQTKSAVTALVKHVKSKNAN--DLIEDESVIWLI-VGTKKIPDTRKAMPKRLNLKYSVLQ-SDAEVCLFTKDPQKEF-KELLASKGVKRVNKVIGISKLRDKYKPFEAKRKLCAAYGMFLADDRVIPLLPKLLGKEFFLKKKQPIPVDM-KKSNLKAEIEKALSSTYMHLNGGSCSAIKVGTTALSEQHIFENIMAVVPQVADNIPKKWKNIQSINIKTSDSISLPIYNSL 230
BLAST of mRNA_P-littoralis_Contig165.16.1 vs. uniprot
Match: W7TFQ3_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TFQ3_9STRA) HSP 1 Score: 180 bits (456), Expect = 7.860e-45 Identity = 105/256 (41.02%), Postives = 154/256 (60.16%), Query Frame = 1
Query: 55 TNLDEAQVRRAASALLKY-------VKSSAVGKPSLIEDDGEVVLAQISLHKIPDKVTAKPTPIAIPHPLR-----QREDCDMCLIVKDNAKAWVKEMQQKEPVEGLTKIIKLDKLRTQYKEFKDRRKLLSQHDLFLADDRILPMLTKALGKTFLKVKKQPVPISL--------ERRSSLGKQIARARDSAFLVGSFGDCWAVKLANTAMTEDQVVENVMAGIGEVVENIPRKWKNVKAINIKCSNSVALPVYSNV 762
+ +D Q RA ALL++ V S + L + G+ +L QI+L KIP++V+ KP P+++PHPL ED +CLIVK++ K V+ ++G+ +++ L +LRT YKEF++RR+L DLFL DDRILP+L KALGKTF KK PV + L + +++GK+I A+ L + G+C +VK+A T+ + V NV+AGI VE P KWKNV AI++K S+SVALP+Y +
Sbjct: 52 SRVDATQATRAVEALLQHNARHQALVASKKSKQDLLASEAGDYILIQIALAKIPERVSPKPVPLSLPHPLHGSGGDDDEDHAVCLIVKESDKGKVQRALNAMKMDGVREVVGLQELRTDYKEFQERRQLRDAFDLFLVDDRILPLLGKALGKTFFSKKKHPVALKLGGLLSSNPQAMATVGKRIIAAQQRTHLYRNHGNCLSVKVAKTSFRPAEAVANVLAGIEAAVEATPGKWKNVMAISVKTSSSVALPLYQRL 307
BLAST of mRNA_P-littoralis_Contig165.16.1 vs. uniprot
Match: A0A225WZF5_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WZF5_9STRA) HSP 1 Score: 175 bits (444), Expect = 1.510e-44 Identity = 104/245 (42.45%), Postives = 148/245 (60.41%), Query Frame = 1
Query: 61 LDEAQVRRAASALLKYV--KSSAVGKPSLIEDDGEVVLAQISLHKIPDKVTAKPTPIAIPHPLRQREDCDMCLIVKDNAKAWVKEMQQKEPVEGLTKIIKLDKLRTQYKEFKDRRKLLSQHDLFLADDRILPMLTKALGKTFLKVKKQPVPISLERRSSLGKQIARARDSAFLVGSFGDCWAVKLANTAMTEDQVVENVMAGIGEVVENIPRKWKNVKAINIKCSNSVALPVYSNVGSLPPAPPV 789
LDEAQVRRA AL + K K L+ED E + ++ +P K + KP PI +PH L E ++CL VKD+ K +KE+ K PV+G+TK++ + KLR + F+D+R L + +D+FLADDR+LP L ALG F KKQP+ + + R+ + AR +AF V S G C VK+A MT +Q+VEN+M + +P+ W V++INIK S+SV+LPVY+ + SL PPV
Sbjct: 14 LDEAQVRRAVLALQLFAAKKQEERAKTPLVEDV-EFLSCILTRKLVPAKASLKPIPITLPHALYD-ESAEICLFVKDDDKKRIKELLVKSPVQGVTKVMTVKKLRKNFSRFEDKRALAAAYDMFLADDRVLPYLKGALGTKFFIKKKQPIAVRVSRKDAANAVRLAARRTAFHV-SAGVCNNVKVARLDMTPEQIVENIMVAMNNCASLVPKGWNGVQSINIKTSDSVSLPVYNALASLAKLPPV 255
BLAST of mRNA_P-littoralis_Contig165.16.1 vs. uniprot
Match: A0A0P1AN32_PLAHL (Low quality protein: ribosomal l1 domain-containing protein 1-like n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AN32_PLAHL) HSP 1 Score: 173 bits (439), Expect = 4.080e-44 Identity = 97/245 (39.59%), Postives = 149/245 (60.82%), Query Frame = 1
Query: 61 LDEAQVRRAASALLKYV--KSSAVGKPSLIEDDGEVVLAQISLHKIPDKVTAKPTPIAIPHPLRQREDCDMCLIVKDNAKAWVKEMQQKEPVEGLTKIIKLDKLRTQYKEFKDRRKLLSQHDLFLADDRILPMLTKALGKTFLKVKKQPVPISLERRSSLGKQIARARDSAFLVGSFGDCWAVKLANTAMTEDQVVENVMAGIGEVVENIPRKWKNVKAINIKCSNSVALPVYSNVGSLPPAPPV 789
LDEAQVRRA AL ++ ++ K +L+ED +++ ++ +P K + KP PI +PH +R E D+CL VKD K +KE K+PV+G+TK++ + KLR + +F+D+R L +D+FLADDR++P L LG F KKQP+ + + R++ A+ +AF V S G C VK+A MT +Q+V+N+M + +P+ W V++IN+K +SVALPVY+ + L PPV
Sbjct: 14 LDEAQVRRAVLALQQFAAKRNEKRTKTALVEDS-DLISCILTRKVVPAKASLKPIPITLPHAIRD-ESADICLFVKDEDKKRIKEALDKDPVQGVTKVMSVKKLRKNFSQFEDKRALAGAYDMFLADDRVIPYLKGPLGSKFFTKKKQPIAVRVSRKNVTSSLRLAAKRTAFHV-SAGVCQNVKVARLDMTIEQIVDNIMVAMNSCANLVPKGWNGVQSINLKLVDSVALPVYNALAPLAKLPPV 255 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig165.16.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig165.16.1 >prot_P-littoralis_Contig165.16.1 ID=prot_P-littoralis_Contig165.16.1|Name=mRNA_P-littoralis_Contig165.16.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=366bp MTNLDEAQVRRAASALLKYVKSSAVGKPSLIEDDGEVVLAQISLHKIPDKback to top mRNA from alignment at P-littoralis_Contig165:70532..75303- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig165.16.1 ID=mRNA_P-littoralis_Contig165.16.1|Name=mRNA_P-littoralis_Contig165.16.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4772bp|location=Sequence derived from alignment at P-littoralis_Contig165:70532..75303- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig165:70532..75303- >mRNA_P-littoralis_Contig165.16.1 ID=mRNA_P-littoralis_Contig165.16.1|Name=mRNA_P-littoralis_Contig165.16.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1098bp|location=Sequence derived from alignment at P-littoralis_Contig165:70532..75303- (Pylaiella littoralis U1_48)back to top |