mRNA_P-littoralis_Contig164.104.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig164.104.1
Unique NamemRNA_P-littoralis_Contig164.104.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig164.104.1 vs. uniprot
Match: UPI000A2A66BF (protein ALP1-like isoform X1 n=2 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A66BF)

HSP 1 Score: 197 bits (501), Expect = 1.820e-57
Identity = 114/255 (44.71%), Postives = 152/255 (59.61%), Query Frame = 1
Query:   16 YPGRWQDLQREFGREDTQLSRIFNEVVDWAYDNHLHSSLLCALRRSFFR----FRFLRTSGGMVCEGGNFIGFIDGTLRRNTRPGGDPAVQEQLYDGHHCAHGLAWQSVVFAHGIMEN-WGPETGRRHDSLLLSRSGLNGRLAALQEGNTTQYRVYGDAAYPILSHIDRGFRGEGLTDAQKAYNKELSKVRVAVEWQFGKVVQIFPFVDFAKKLKIRLQAVAKYYALAILLTNAHTCISGSITGFYFDMTAPSLE 765
            YP RW DLQ  FGR +++LS IFNEV+D  Y++H H  L+ AL   +       + +   G  + +     GFIDGT R   RP      Q  +Y GH   H L +QSV   +G++ + +GP  GRRHD+ +L  SGL  +L  LQ  N   Y +YGD AY +  +I   FRG  LT  Q+ +N+ +SK+RVAVEW FGK+ Q F F+DF K +K+ LQ V KYY +A LLTN HTC+  S TG YF++  PSLE
Sbjct:  146 YPNRWCDLQSLFGRSESELSLIFNEVIDDIYESHHH--LIDALDLVWLDPQTFSQAIHAKGAPLDQ---CWGFIDGTPRPIARP---IRSQRIMYSGHKRVHCLKFQSVQAPNGLIAHLFGPIEGRRHDAFMLGESGLADKLRPLQRPNGEPYVIYGDPAYGLTRNILAPFRGAQLTHDQQEFNRRMSKLRVAVEWGFGKICQQFAFLDFKKNMKVLLQPVGKYYVVAALLTNCHTCLYNSQTGRYFELYPPSLE 392          
BLAST of mRNA_P-littoralis_Contig164.104.1 vs. uniprot
Match: A0A6S7GNP4_PARCT (DDE Tnp4 domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7GNP4_PARCT)

HSP 1 Score: 189 bits (479), Expect = 1.400e-54
Identity = 110/257 (42.80%), Postives = 152/257 (59.14%), Query Frame = 1
Query:   16 YPGRWQDLQREFGREDTQLSRIFNEVVDWAYD--NHLHSSL-LCALRRSFFRFRFLRTSGGMVCEGGNFI---GFIDGTLRRNTRPGGDPAVQEQLYDGHHCAHGLAWQSVVFAHGIMEN-WGPETGRRHDSLLLSRSGLNGRLAALQEGNTTQYRVYGDAAYPILSHIDRGFRGEGLTDAQKAYNKELSKVRVAVEWQFGKVVQIFPFVDFAKKLKIRLQAVAKYYALAILLTNAHTCISGSITGFYFDMTAPSLE 765
            YP RW DL + FGR + +LS +FN V++  Y   NHL +SL L  L  + F       +  + C+G       GFIDGT RR  RP      Q  +Y GH   H + +QSV+  +G++ + +GP  GRRHD+ +L  SGL   L  + + N   Y VYGD AY I  HI   F+G  LT+ Q+ +N+++S+VRV VEW FGK+ Q F ++DF K LK+ LQ VAKYYA+  LL N HTC+ GS+   +F++  P LE
Sbjct:  110 YPNRWCDLVKIFGRSEAELSILFNMVINDIYTRFNHLLTSLDLAWLDPAIF-------ADAVHCKGAPLNQCWGFIDGTTRRIARP---VRNQNVMYSGHKRIHCIKFQSVLAPNGLIAHLFGPIEGRRHDAFMLGVSGLLPLLERIIKPNGEPYVVYGDPAYGISRHIISPFKGAHLTEPQQQFNRDMSEVRVCVEWGFGKIAQYFAYLDFQKNLKVLLQPVAKYYAVGALLINCHTCLYGSVASSFFNLDPPLLE 356          
BLAST of mRNA_P-littoralis_Contig164.104.1 vs. uniprot
Match: UPI00077A7035 (uncharacterized protein LOC107333236 n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A7035)

HSP 1 Score: 186 bits (471), Expect = 4.270e-54
Identity = 105/254 (41.34%), Postives = 150/254 (59.06%), Query Frame = 1
Query:   16 YPGRWQDLQREFGREDTQLSRIFNEVVDWAYDNH---LHSSLLCALRRSFFRFRFLRTSGGMVCEGGNFIGFIDGTLRRNTRPGGDPAVQEQLYDGHHCAHGLAWQSVVFAHGIMEN-WGPETGRRHDSLLLSRSGLNGRLAALQEGNTTQYRVYGDAAYPILSHIDRGFRGEGLTDAQKAYNKELSKVRVAVEWQFGKVVQIFPFVDFAKKLKIRLQAVAKYYALAILLTNAHTCISGSITGFYFDMTAPSLE 765
            YP RW DL+  FGR +++LS IF+EV+D  +D     L S  L  L    F  + +   G  + +     GFIDGT R   RP      Q+ +Y GH   H + +QSV   +G++ + +GP  G+RHD+ +L  SGL  +L   Q  N   Y +YGD AY +  +I   +RG  LTD Q+ +N ++SK+R  VEW FGK+ Q+F F+DF K LK+ LQ + KYY +A++L N HTC+ GS TG YF++  P+LE
Sbjct:   50 YPSRWCDLEAIFGRSESELSLIFHEVLDDIHDRFSDLLDSLDLIWLDPGLFS-QVIHWKGAPLTQ---CWGFIDGTPRPIARP---TRNQQIMYSGHKRTHCIKFQSVQAPNGLIAHMFGPIEGKRHDAFMLGVSGLADKLRRFQRPNGEPYVIYGDPAYGLSRNILAPYRGVRLTDDQQEFNSQMSKMRCCVEWGFGKISQLFAFLDFKKNLKVLLQPIGKYYLVAVILINCHTCLYGSQTGAYFNLDPPTLE 296          
BLAST of mRNA_P-littoralis_Contig164.104.1 vs. uniprot
Match: UPI00077A71E6 (uncharacterized protein LOC107340903 n=3 Tax=Acropora TaxID=6127 RepID=UPI00077A71E6)

HSP 1 Score: 186 bits (473), Expect = 2.260e-53
Identity = 110/255 (43.14%), Postives = 151/255 (59.22%), Query Frame = 1
Query:   16 YPGRWQDLQREFGREDTQLSRIFNEVVDWAYD--NHLHSSL-LCALRRSFFRFRFLRTSGGMVCEGGNFIGFIDGTLRRNTRPGGDPAVQEQLYDGHHCAHGLAWQSVVFAHG-IMENWGPETGRRHDSLLLSRSGLNGRLAA-LQEGNTTQYRVYGDAAYPILSHIDRGFRGEGLTDAQKAYNKELSKVRVAVEWQFGKVVQIFPFVDFAKKLKIRLQAVAKYYALAILLTNAHTCISGSITGFYFDMTAPSLE 765
            YP RW +L + FGR + +LS IFNE++   Y+  +HL  SL L  L    F  R +   G  + +     GF+DGT R  TRP      Q  ++ GH   H L +QSVV  +G I   +GP  GRRHD+ +L+ SGL  +L   L + N   Y +YGD AYP+  HI   FRG  LT  ++ +NK++S VR++VEW +GK+V+ F F+DF K LK+ LQ V K Y +  +L N HTC+ GS TG +FD+  PSLE
Sbjct:  139 YPNRWCELTKLFGRAEPELSMIFNEILSDVYNRFSHLLESLDLIWLDADAFS-RAIYGKGAPLRD---CWGFVDGTARPTTRP---VRNQRIMFSGHKRVHCLKFQSVVSPNGMICHLFGPVEGRRHDAFMLAESGLLPKLERRLNKPNGEPYVIYGDPAYPVRRHILAPFRGARLTPDEERFNKDMSTVRISVEWGYGKIVRYFAFLDFNKNLKVLLQPVGKMYVVGAILANCHTCLYGSQTGDFFDLDPPSLE 386          
BLAST of mRNA_P-littoralis_Contig164.104.1 vs. uniprot
Match: UPI00077AC7F2 (uncharacterized protein LOC107350804 n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077AC7F2)

HSP 1 Score: 185 bits (469), Expect = 5.160e-53
Identity = 113/259 (43.63%), Postives = 152/259 (58.69%), Query Frame = 1
Query:    1 LLQRRYPGRWQDLQREFGREDTQLSRIFNEVVDWAYD--NHLHSSL-LCALRRSFFRFRFLRTSGGMVCEGGNFIGFIDGTLRRNTRPGGDPAVQEQLYDGHHCAHGLAWQSVVFAHGIMEN-WGPETGRRHDSLLLSRSGLNGRLAALQEGNTTQYRVYGDAAYPILSHIDRGFRGEGLTDAQKAYNKELSKVRVAVEWQFGKVVQIFPFVDFAKKLKIRLQAVAKYYALAILLTNAHTCISGSITGFYFDMTAPSLE 765
            LL+  YP RW DL   FGR++ QLS IFN+V+D  Y+  NHL +SL L  L    F  + +   G  + +     GFIDGT R   RP      Q  ++ GH   H L +QSV   +GI+ + +GP  GRRHD+ +L  SGL  +L  LQ      Y +YGD AY +  +I   FRG  LT+ ++ +N ++SKVR  VEW FGK+ Q F F+DF K L++ LQ V KYY +A +L N HTC+ GS T  YF++  PSLE
Sbjct:  113 LLRLVYPSRWCDLAPVFGRDEPQLSLIFNKVMDDIYERFNHLLTSLDLVWLDPEMFS-QAVEAKGAPLHQ---CWGFIDGTPRPIARP---IRNQRIMFSGHKRTHCLKFQSVQAPNGIIAHMFGPIEGRRHDAFMLGISGLADKLERLQTPTGEPYVIYGDPAYGLTRNILAPFRGVQLTNDEQLFNTQMSKVRTCVEWGFGKICQNFAFLDFKKNLRVLLQPVGKYYLVASILVNCHTCLYGSQTSTYFNLEPPSLE 364          
BLAST of mRNA_P-littoralis_Contig164.104.1 vs. uniprot
Match: A0A7D9ID63_PARCT (DDE Tnp4 domain-containing protein n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9ID63_PARCT)

HSP 1 Score: 185 bits (469), Expect = 8.050e-53
Identity = 99/253 (39.13%), Postives = 144/253 (56.92%), Query Frame = 1
Query:   16 YPGRWQDLQREFGREDTQLSRIFNEVVDWAYDNHLHSSLLCALRRSFFRFRFLRTSGGMVCEGG----NFIGFIDGTLRRNTRPGGDPAVQEQLYDGHHCAHGLAWQSVVFAHGIMENW-GPETGRRHDSLLLSRSGLNGRLAALQEGNTTQYRVYGDAAYPILSHIDRGFRGEGLTDAQKAYNKELSKVRVAVEWQFGKVVQIFPFVDFAKKLKIRLQAVAKYYALAILLTNAHTCISGSITGFYFDMTAPS 759
            YP R+ D+   FGR  ++L  IFNE +D+ Y+ H H   L +  + F     L+     +   G    N  GF+DGT+R+  RP      Q+ +Y+GH   H + +QSVV  +G++ N  GP  G+RHDS++L  SGL   L  +   N     +YGD AYP+  H+   FR   LT A   +N+E+S+VRV+VEW FG + + F FVDF +++K+ L  V K Y +A LL NAHTC+  +I   +FD+  PS
Sbjct:  124 YPCRYSDMVSRFGRNPSELCLIFNEALDFLYERHHHR--LQSWNQPFLSPEILQIYADAIHNKGAPLDNCFGFVDGTVRQIARP---KYHQKVMYNGHKRVHSIKFQSVVLPNGLIGNLAGPYEGKRHDSVILQESGLLTNLRQIAFYNNNPLCIYGDPAYPLGVHLQAPFRERELTPAMAEFNREMSRVRVSVEWMFGNITKYFSFVDFKRQMKLHLSPVGKIYTVAALLQNAHTCLYENIVSHFFDLKPPS 371          
BLAST of mRNA_P-littoralis_Contig164.104.1 vs. uniprot
Match: UPI00106B81BB (uncharacterized protein LOC114518718 n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106B81BB)

HSP 1 Score: 181 bits (459), Expect = 9.430e-53
Identity = 105/255 (41.18%), Postives = 148/255 (58.04%), Query Frame = 1
Query:   16 YPGRWQDLQREFGREDTQLSRIFNEVVDWAYDNHLHSSLLCALRRSFFRFRF----LRTSGGMVCEGGNFIGFIDGTLRRNTRPGGDPAVQEQLYDGHHCAHGLAWQSVVFAHGIMEN-WGPETGRRHDSLLLSRSGLNGRLAALQEGNTTQYRVYGDAAYPILSHIDRGFRGEGLTDAQKAYNKELSKVRVAVEWQFGKVVQIFPFVDFAKKLKIRLQAVAKYYALAILLTNAHTCISGSITGFYFDMTAPSLE 765
            YP RW DL   FGR +++LS IFN+++D   D    S LL +L   +F        +   G  + +     GFIDGT+R   RP      Q+ ++ GH   H + +QSV   +G++ N +GP  GRRHD+ +L  S L  +L  +++ N   Y +YGD AY +  +I   FRG  LT  ++ +NK +SK+RV+VEW FGK+ Q F F+DF K  KI LQ + KYY +  LLTN HTC+ GS+T  YF +  PSLE
Sbjct:   13 YPNRWCDLVSIFGRSESELSLIFNKILDDICDRF--SYLLDSLDLVWFDPELFSNPIHNKGAPLTQ---CWGFIDGTVRPIPRP---IRNQQIMFSGHKRTHCIKFQSVHAPNGLIANMFGPVEGRRHDAFILGVSNLADKLCRIRQPNGEPYIIYGDPAYGVTDNILAPFRGVFLTADEQEFNKRMSKLRVSVEWGFGKIAQYFAFLDFKKNQKILLQPIGKYYLVGTLLTNCHTCLYGSLTSSYFGVQPPSLE 259          
BLAST of mRNA_P-littoralis_Contig164.104.1 vs. uniprot
Match: A0A6P8HEE0_ACTTE (uncharacterized protein LOC116291725 n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8HEE0_ACTTE)

HSP 1 Score: 182 bits (463), Expect = 3.220e-52
Identity = 110/254 (43.31%), Postives = 147/254 (57.87%), Query Frame = 1
Query:   16 YPGRWQDLQREFGREDTQLSRIFNEVVDWAYDN--HLHSSL-LCALRRSFFRFRFLRTSGGMVCEGGNFIGFIDGTLRRNTRPGGDPAVQEQLYDGHHCAHGLAWQSVVFAHGIMEN-WGPETGRRHDSLLLSRSGLNGRLAALQEGNTTQYRVYGDAAYPILSHIDRGFRGEGLTDAQKAYNKELSKVRVAVEWQFGKVVQIFPFVDFAKKLKIRLQAVAKYYALAILLTNAHTCISGSITGFYFDMTAPSLE 765
            YP RW DL   FGR +++LS IFN+V+D  YD   HL  SL L  L    F  + +   G  + +     GFIDGT R   RP    A Q  +Y GH   H L +QSV   +G++ + +GP  GRRHD+ +L  SGL  +L   Q+ +   Y +YGD AY I  +I   FRG  L   Q+ +N  +SKVRV VEW FGK+ Q+F F+DF + LK+ LQ  AKYY +A +L N HTC+ GS T  +F +  P+LE
Sbjct:  109 YPNRWCDLVPIFGRPESELSLIFNKVLDDIYDRFKHLLESLDLIWLDPQLFS-QVIYDKGAPLEQ---CWGFIDGTPRPIARP---TANQRIMYSGHKRTHCLKFQSVQAPNGLIAHMYGPIEGRRHDAFMLGESGLLNKLQRFQKPSGEPYVIYGDPAYGITQNIISPFRGARLPPDQQQFNSLMSKVRVTVEWGFGKITQLFAFLDFKRNLKVLLQPTAKYYLVACVLVNCHTCLYGSQTSKFFGLDPPTLE 355          
BLAST of mRNA_P-littoralis_Contig164.104.1 vs. uniprot
Match: A0A6S7FVW6_PARCT (DDE Tnp4 domain-containing protein n=3 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7FVW6_PARCT)

HSP 1 Score: 182 bits (462), Expect = 4.100e-52
Identity = 99/258 (38.37%), Postives = 145/258 (56.20%), Query Frame = 1
Query:   16 YPGRWQDLQREFGREDTQLSRIFNEVVDWAYDNHLHSSLLCALRRSFFRFRFLRTSGGMVCEGG----NFIGFIDGTLRRNTRPGGDPAVQEQLYDGHHCAHGLAWQSVVFAHGIMENW-GPETGRRHDSLLLSRSGLNGRLAALQEGNTTQYRVYGDAAYPILSHIDRGFRGEGLTDAQKAYNKELSKVRVAVEWQFGKVVQIFPFVDFAKKLKIRLQAVAKYYALAILLTNAHTCISGSITGFYFDMTAPSLEACF 774
            YP R+ D+   FGR  ++L  IFNEV+D+ Y+ H H   L +  + F   + L+     +   G    N  GF+DGT+R+  RP      Q  + +GH   H + +QSVV  +G++ N  GP  G+RHDS++L  SGL   L  +   N     +YGD AYP+  H+   FR   LT A   +N+E+S+VRV+VEW FG + + F FVDF +++K+ L  V K Y +A LL NAHTC+  +I   +F +  PS+   F
Sbjct:  104 YPCRYSDMVSRFGRNPSELCLIFNEVLDFLYERHHHR--LQSWNQPFLSPQILQIYADAIHNKGAPLDNCFGFVDGTVRQIPRP---KYHQRVMCNGHKRVHSIKFQSVVLPNGLIGNLAGPYEGKRHDSMMLQESGLLTNLQQIAFYNNNPLSIYGDPAYPLGVHLQAPFRERELTPAMAEFNREMSRVRVSVEWMFGNITKYFSFVDFKRQMKLHLSPVGKIYTVAALLQNAHTCLYENIVSHFFYLKPPSIHEYF 356          
BLAST of mRNA_P-littoralis_Contig164.104.1 vs. uniprot
Match: UPI00106C0330 (uncharacterized protein LOC114542457 n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106C0330)

HSP 1 Score: 181 bits (460), Expect = 8.360e-52
Identity = 109/257 (42.41%), Postives = 147/257 (57.20%), Query Frame = 1
Query:   16 YPGRWQDLQREFGREDTQLSRIFNEVVDWAYDN--HLHSSL-LCALRRSFFRFRFLRTSGGMVCEGGNFI---GFIDGTLRRNTRPGGDPAVQEQLYDGHHCAHGLAWQSVVFAHGIMENW-GPETGRRHDSLLLSRSGLNGRLAALQEGNTTQYRVYGDAAYPILSHIDRGFRGEGLTDAQKAYNKELSKVRVAVEWQFGKVVQIFPFVDFAKKLKIRLQAVAKYYALAILLTNAHTCISGSITGFYFDMTAPSLE 765
            YP RW DL   FGR ++QLS IFN+++D  Y+   HL  SL L  L    F       +  + C+G        FIDGT+R   RP      Q+ +Y GH   H + +Q+V   +G++ NW GP  GRRHD+ +LS SGL  +L  ++  +   Y +YGD AY I   I   +RG  LT  Q  +NK +SKVRV+VEW FGK+ Q F F+DF K  KI LQ + KYY +  +L N HTC+ GS+T  +F +  PSLE
Sbjct:  105 YPNRWCDLVGIFGRSESQLSLIFNKILDDIYNRFGHLLDSLDLVWLDPECF-------AQAIHCQGAPLTQCWAFIDGTVRPIARP---VVNQDIMYSGHKRVHCIKFQAVHAPNGLIVNWFGPIEGRRHDAFMLSVSGLTEKLQNIETPDGELYVLYGDPAYGINDCILAPYRGAQLTQNQSEFNKRMSKVRVSVEWGFGKLCQYFAFLDFKKNQKILLQPLGKYYLVGSVLINCHTCLYGSVTSSFFKVQPPSLE 351          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig164.104.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI000A2A66BF1.820e-5744.71protein ALP1-like isoform X1 n=2 Tax=Exaiptasia di... [more]
A0A6S7GNP4_PARCT1.400e-5442.80DDE Tnp4 domain-containing protein n=1 Tax=Paramur... [more]
UPI00077A70354.270e-5441.34uncharacterized protein LOC107333236 n=1 Tax=Acrop... [more]
UPI00077A71E62.260e-5343.14uncharacterized protein LOC107340903 n=3 Tax=Acrop... [more]
UPI00077AC7F25.160e-5343.63uncharacterized protein LOC107350804 n=1 Tax=Acrop... [more]
A0A7D9ID63_PARCT8.050e-5339.13DDE Tnp4 domain-containing protein n=2 Tax=Paramur... [more]
UPI00106B81BB9.430e-5341.18uncharacterized protein LOC114518718 n=1 Tax=Dendr... [more]
A0A6P8HEE0_ACTTE3.220e-5243.31uncharacterized protein LOC116291725 n=1 Tax=Actin... [more]
A0A6S7FVW6_PARCT4.100e-5238.37DDE Tnp4 domain-containing protein n=3 Tax=Paramur... [more]
UPI00106C03308.360e-5242.41uncharacterized protein LOC114542457 n=1 Tax=Dendr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig164contigP-littoralis_Contig164:466310..467595 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog7668.SPU_016560-tr
PFAMsDDE_Tnp_4
Model size783
Max annot lvl33154|Opisthokonta
Hectar predicted targeting categoryother localisation
Exons2
Evalue9.86e-49
EggNOG OGs2AWDH@1|root,2RZYI@2759|Eukaryota,3A38W@33154|Opisthokonta,3BS4I@33208|Metazoa,3D9UV@33213|Bilateria
DescriptionDDE superfamily endonuclease
Cds size783
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789794.075875-CDS-P-littoralis_Contig164:466309..4664351680789794.075875-CDS-P-littoralis_Contig164:466309..466435Pylaiella littoralis U1_48CDSP-littoralis_Contig164 466310..466435 +
1680789794.0853004-CDS-P-littoralis_Contig164:466938..4675951680789794.0853004-CDS-P-littoralis_Contig164:466938..467595Pylaiella littoralis U1_48CDSP-littoralis_Contig164 466939..467595 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig164.104.1prot_P-littoralis_Contig164.104.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig164 466310..467595 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig164.104.1

>prot_P-littoralis_Contig164.104.1 ID=prot_P-littoralis_Contig164.104.1|Name=mRNA_P-littoralis_Contig164.104.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=261bp
LLQRRYPGRWQDLQREFGREDTQLSRIFNEVVDWAYDNHLHSSLLCALRR
SFFRFRFLRTSGGMVCEGGNFIGFIDGTLRRNTRPGGDPAVQEQLYDGHH
CAHGLAWQSVVFAHGIMENWGPETGRRHDSLLLSRSGLNGRLAALQEGNT
TQYRVYGDAAYPILSHIDRGFRGEGLTDAQKAYNKELSKVRVAVEWQFGK
VVQIFPFVDFAKKLKIRLQAVAKYYALAILLTNAHTCISGSITGFYFDMT
APSLEACFTF*
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mRNA from alignment at P-littoralis_Contig164:466310..467595+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig164.104.1 ID=mRNA_P-littoralis_Contig164.104.1|Name=mRNA_P-littoralis_Contig164.104.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1286bp|location=Sequence derived from alignment at P-littoralis_Contig164:466310..467595+ (Pylaiella littoralis U1_48)
TTGCTCCAACGCAGGTATCCTGGACGCTGGCAGGACCTGCAAAGGGAGTT CGGCCGGGAGGACACCCAGTTGAGTCGAATTTTCAACGAGGTGGTCGACT GGGCGTACGACAACCACCTGCACAGCGTGACTGACTGCCTGGAGTTCTTC GCTCCACGCTTCCCTCAGATGTGCAAGAAGATAGAAGCGAAAGGTGACCA TTTTAACGGCGTCGTACTCGGTGTTCTCGTGAAGCAGAAAGCCAGGGTTG TGCCGCTGCCGCCGGTTGATAATTGCCCGCCTGAGCCGAGGCCCCCTTTT TTATGTTTGGCGTACAGACACTAGTACGATGTAAACACAAAGCGACGTGA AGATGATACACAACAGAGCAGCAGCAGCCACCTTAGCTACAACGGTTTTA ACCTTGCCACAGCTGGTGGTTTTGCGCGCAATGCTGGTTGTGCAATGAGG AGAGTTCGTTGCGCTCTCTGCCTGTCTCTCTCTTTCTCTCTCTTTCTGTG TGTGTTGTGGGCGCACGGTAGCAGCAGCACACACAGAAGTGCAGCGTTTT GGACACAGAGCCCCAAATAACCAAACGGACCTTAGTCATGAACGTAAATT CATCAAGGAAAGCAGGTCACACATATCAGAGCCTCTTGTGTGCGTTGCGT CGCTCCTTTTTTCGGTTTCGTTTTCTTCGTACATCAGGTGGAATGGTCTG CGAAGGCGGTAACTTCATCGGGTTCATCGACGGGACACTCAGGAGGAACA CTCGCCCAGGGGGGGATCCGGCAGTGCAGGAGCAATTGTACGACGGTCAC CACTGCGCCCACGGCCTTGCTTGGCAATCAGTTGTCTTTGCTCACGGAAT CATGGAAAATTGGGGACCGGAGACAGGGCGGCGACACGACTCCCTTCTTC TGTCGAGGAGCGGACTGAACGGGAGACTCGCCGCTCTGCAGGAAGGCAAC ACTACGCAGTACAGGGTGTACGGCGATGCTGCATACCCCATCTTGTCTCA CATCGACCGGGGTTTCCGCGGAGAGGGTCTCACAGATGCGCAAAAGGCCT ACAACAAGGAGCTTTCTAAGGTCAGGGTGGCGGTGGAGTGGCAGTTCGGC AAGGTCGTGCAGATTTTCCCGTTTGTCGACTTCGCGAAAAAACTGAAGAT CAGGCTGCAGGCGGTCGCGAAGTACTACGCCTTGGCTATACTGCTCACCA ACGCGCACACCTGCATCTCCGGGAGCATCACCGGCTTCTACTTCGACATG ACCGCACCGTCACTAGAGGCGTGCTTTACGTTCTAG
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Coding sequence (CDS) from alignment at P-littoralis_Contig164:466310..467595+

>mRNA_P-littoralis_Contig164.104.1 ID=mRNA_P-littoralis_Contig164.104.1|Name=mRNA_P-littoralis_Contig164.104.1|organism=Pylaiella littoralis U1_48|type=CDS|length=783bp|location=Sequence derived from alignment at P-littoralis_Contig164:466310..467595+ (Pylaiella littoralis U1_48)
TTGCTCCAACGCAGGTATCCTGGACGCTGGCAGGACCTGCAAAGGGAGTT
CGGCCGGGAGGACACCCAGTTGAGTCGAATTTTCAACGAGGTGGTCGACT
GGGCGTACGACAACCACCTGCACAGCAGCCTCTTGTGTGCGTTGCGTCGC
TCCTTTTTTCGGTTTCGTTTTCTTCGTACATCAGGTGGAATGGTCTGCGA
AGGCGGTAACTTCATCGGGTTCATCGACGGGACACTCAGGAGGAACACTC
GCCCAGGGGGGGATCCGGCAGTGCAGGAGCAATTGTACGACGGTCACCAC
TGCGCCCACGGCCTTGCTTGGCAATCAGTTGTCTTTGCTCACGGAATCAT
GGAAAATTGGGGACCGGAGACAGGGCGGCGACACGACTCCCTTCTTCTGT
CGAGGAGCGGACTGAACGGGAGACTCGCCGCTCTGCAGGAAGGCAACACT
ACGCAGTACAGGGTGTACGGCGATGCTGCATACCCCATCTTGTCTCACAT
CGACCGGGGTTTCCGCGGAGAGGGTCTCACAGATGCGCAAAAGGCCTACA
ACAAGGAGCTTTCTAAGGTCAGGGTGGCGGTGGAGTGGCAGTTCGGCAAG
GTCGTGCAGATTTTCCCGTTTGTCGACTTCGCGAAAAAACTGAAGATCAG
GCTGCAGGCGGTCGCGAAGTACTACGCCTTGGCTATACTGCTCACCAACG
CGCACACCTGCATCTCCGGGAGCATCACCGGCTTCTACTTCGACATGACC
GCACCGTCACTAGAGGCGTGCTTTACGTTCTAG
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