mRNA_P-littoralis_Contig164.71.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig164.71.1 vs. uniprot
Match: A0A6H5KD49_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD49_9PHAE) HSP 1 Score: 135 bits (340), Expect = 6.370e-39 Identity = 67/105 (63.81%), Postives = 77/105 (73.33%), Query Frame = 1
Query: 1 MGALRNGAVPVEYQVGLTLRWLAGASMYEGMDGHVIARSTAYQTAFRVIKAINDCTELDCKWPATPEDVADKAAHFEKRCSVGVIRKCVGAMDGLFVRTIRPTTR 315
MG LRNGA+PVE QV +TLRWLAG S+YE MDGHVIARSTAY VI A+N C EL+CKWP ED A A F R S+ V+RKCVGAMD LFVR I+P+ +
Sbjct: 1 MGLLRNGAIPVEDQVAMTLRWLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPEG-EDAARAAELFRNRSSMDVVRKCVGAMDVLFVRMIKPSAK 104
BLAST of mRNA_P-littoralis_Contig164.71.1 vs. uniprot
Match: A0A6H5L6B6_9PHAE (DDE Tnp4 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6B6_9PHAE) HSP 1 Score: 136 bits (343), Expect = 2.100e-36 Identity = 67/105 (63.81%), Postives = 77/105 (73.33%), Query Frame = 1
Query: 1 MGALRNGAVPVEYQVGLTLRWLAGASMYEGMDGHVIARSTAYQTAFRVIKAINDCTELDCKWPATPEDVADKAAHFEKRCSVGVIRKCVGAMDGLFVRTIRPTTR 315
MG LRNGA+PVE QV +TLRWLAG S+YE MDGHVIARSTAY VI A+N C EL+CKWP ED A A F R S+ V+RKCVGA DGLFVR I+P+ +
Sbjct: 87 MGLLRNGAIPVEDQVAMTLRWLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPEG-EDAARAAELFRNRSSMDVVRKCVGATDGLFVRMIKPSAK 190
BLAST of mRNA_P-littoralis_Contig164.71.1 vs. uniprot
Match: A0A6H5JJA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJA1_9PHAE) HSP 1 Score: 132 bits (332), Expect = 6.050e-35 Identity = 63/104 (60.58%), Postives = 76/104 (73.08%), Query Frame = 1
Query: 4 GALRNGAVPVEYQVGLTLRWLAGASMYEGMDGHVIARSTAYQTAFRVIKAINDCTELDCKWPATPEDVADKAAHFEKRCSVGVIRKCVGAMDGLFVRTIRPTTR 315
G LRNGA+PVEYQV +TLRWLAG S+YE MDGHVIARSTAY VI A+N C EL+CKWP ED+ + + + V+RKCVGAMDGLFVR I+P+ +
Sbjct: 99 GLLRNGAIPVEYQVAMTLRWLAGGSIYEYMDGHVIARSTAYHVTSTVINALNACPELNCKWPEG-EDLPEPPSFSATAALMDVVRKCVGAMDGLFVRMIKPSAK 201
BLAST of mRNA_P-littoralis_Contig164.71.1 vs. uniprot
Match: A0A6H5K3F2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3F2_9PHAE) HSP 1 Score: 126 bits (316), Expect = 1.860e-32 Identity = 62/105 (59.05%), Postives = 76/105 (72.38%), Query Frame = 1
Query: 1 MGALRNGAVPVEYQVGLTLRWLAGASMYEGMDGHVIARSTAYQTAFRVIKAINDCTELDCKWPATPEDVADKAAHFEKRCSVGVIRKCVGAMDGLFVRTIRPTTR 315
MGALRNG +PVE+Q+ + LR+LAG S++E MDG+VIARSTAY RVI AIN ELDC WP ED D+ + +R + GVIR CVGAMDGLFVR +P+ R
Sbjct: 94 MGALRNGVIPVEFQLAMALRFLAGGSVFEVMDGNVIARSTAYAIVHRVIDAINQTRELDCVWPEG-EDALDQCGMYRRRSTNGVIRMCVGAMDGLFVRMTQPSLR 197
BLAST of mRNA_P-littoralis_Contig164.71.1 vs. uniprot
Match: A0A6H5JVS8_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS8_9PHAE) HSP 1 Score: 124 bits (311), Expect = 2.490e-32 Identity = 61/105 (58.10%), Postives = 71/105 (67.62%), Query Frame = 1
Query: 1 MGALRNGAVPVEYQVGLTLRWLAGASMYEGMDGHVIARSTAYQTAFRVIKAINDCTELDCKWPATPEDVADKAAHFEKRCSVGVIRKCVGAMDGLFVRTIRPTTR 315
MG LR GA+PVEYQ+ +TLRWLAG S+YE MDGHVIARSTAY VI A+N C EL+CKWP DV +RKCVGAMDGLFVR I+P+ +
Sbjct: 98 MGLLRIGAIPVEYQIAMTLRWLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPEARMDV---------------VRKCVGAMDGLFVRMIKPSAK 187
BLAST of mRNA_P-littoralis_Contig164.71.1 vs. uniprot
Match: A0A6H5K6M2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6M2_9PHAE) HSP 1 Score: 122 bits (305), Expect = 8.050e-31 Identity = 60/102 (58.82%), Postives = 77/102 (75.49%), Query Frame = 1
Query: 1 MGALRNGAVPVEYQVGLTLRWLAGASMYEGMDGHVIARSTAYQTAFRVIKAINDCTELDCKWPATPEDVADKAAHFEKRCSVGVIRKCVGAMDGLFVRTIRP 306
MGALRNGA+PVE+Q+ +TLR+LAG S++E MD +VIA+STAY RVI AIN +L+CKWP +D +A + +R + GVIR+CVGAMDGLFVR I P
Sbjct: 98 MGALRNGAIPVEFQLAMTLRFLAGGSVFEVMDSNVIAKSTAYAIVHRVIDAINQTRQLNCKWPYG-DDAEAQAELYRRRSTNGVIRRCVGAMDGLFVRLIPP 198
BLAST of mRNA_P-littoralis_Contig164.71.1 vs. uniprot
Match: A0A6H5J9B3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9B3_9PHAE) HSP 1 Score: 109 bits (273), Expect = 9.930e-29 Identity = 54/83 (65.06%), Postives = 59/83 (71.08%), Query Frame = 1
Query: 1 MGALRNGAVPVEYQVGLTLRWLAGASMYEGMDGHVIARSTAYQTAFRVIKAINDCTELDCKWPATPEDVADKAAHFEKRCSVG 249
MG LRNGA+PVEYQV +TLRWLAG S+YE MDGHVIARSTAY VI A+N C EL+CKWP ED A A F R S G
Sbjct: 1 MGLLRNGAIPVEYQVAMTLRWLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPEG-EDAAGAAELFRNRSSYG 82
BLAST of mRNA_P-littoralis_Contig164.71.1 vs. uniprot
Match: A0A6H5JYU2_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYU2_9PHAE) HSP 1 Score: 90.5 bits (223), Expect = 5.700e-19 Identity = 43/75 (57.33%), Postives = 52/75 (69.33%), Query Frame = 1
Query: 91 MDGHVIARSTAYQTAFRVIKAINDCTELDCKWPATPEDVADKAAHFEKRCSVGVIRKCVGAMDGLFVRTIRPTTR 315
MD HVIARSTAY VI A+N C+E++CKWP ED A A F R S+ V+RKCVGAMDG FVR I+P+ +
Sbjct: 1 MDDHVIARSTAYHETSTVINALNACSEVNCKWPEG-EDAARAAELFRNRSSIDVVRKCVGAMDGFFVRMIKPSAK 74
BLAST of mRNA_P-littoralis_Contig164.71.1 vs. uniprot
Match: A0A6H5K540_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K540_9PHAE) HSP 1 Score: 77.0 bits (188), Expect = 1.770e-14 Identity = 37/59 (62.71%), Postives = 44/59 (74.58%), Query Frame = 1
Query: 1 MGALRNGAVPVEYQVGLTLRWLAGASMYEGMDGHVIARSTAYQTA----FRVIKAINDC 165
MG LRNGA+PVEYQV +TLRWLAG S YE MDGHVIARSTAY +R++ + +C
Sbjct: 98 MGLLRNGAIPVEYQVAMTLRWLAGGSTYECMDGHVIARSTAYHAVCDAQYRIMAWMMNC 156
BLAST of mRNA_P-littoralis_Contig164.71.1 vs. uniprot
Match: A0A0L0FJ40_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FJ40_9EUKA) HSP 1 Score: 63.5 bits (153), Expect = 1.000e-9 Identity = 38/99 (38.38%), Postives = 59/99 (59.60%), Query Frame = 1
Query: 1 MGALRNGAVPVEYQVGLTLRWLAGASMYEGMDGHVIARSTAYQTAFRVIKAINDCTELDC---KWPATPEDVADKAAHFEKRCSVGVIRKCVGAMDGLF 288
MG+LRNG++ V ++ T R LAG+ + + HV +ST Y RV++AIN+ + LD ++ T ++ + A F +R + GVI VGA+DGLF
Sbjct: 151 MGSLRNGSIDVGVRLA-TSRMLAGSQVADLKCTHVKHKSTVYAIFKRVVRAINEVSNLDALRIRFSTTTQECKEIAEGFRQRPTFGVIAYWVGALDGLF 248 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig164.71.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig164.71.1 >prot_P-littoralis_Contig164.71.1 ID=prot_P-littoralis_Contig164.71.1|Name=mRNA_P-littoralis_Contig164.71.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=105bp MGALRNGAVPVEYQVGLTLRWLAGASMYEGMDGHVIARSTAYQTAFRVIKback to top mRNA from alignment at P-littoralis_Contig164:343609..343923+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig164.71.1 ID=mRNA_P-littoralis_Contig164.71.1|Name=mRNA_P-littoralis_Contig164.71.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=315bp|location=Sequence derived from alignment at P-littoralis_Contig164:343609..343923+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig164:343609..343923+ >mRNA_P-littoralis_Contig164.71.1 ID=mRNA_P-littoralis_Contig164.71.1|Name=mRNA_P-littoralis_Contig164.71.1|organism=Pylaiella littoralis U1_48|type=CDS|length=315bp|location=Sequence derived from alignment at P-littoralis_Contig164:343609..343923+ (Pylaiella littoralis U1_48)back to top |