mRNA_P-littoralis_Contig164.52.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig164.52.1 vs. uniprot
Match: D7FMA9_ECTSI (Dehydrogenase/reductase SDR family member 13 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMA9_ECTSI) HSP 1 Score: 506 bits (1302), Expect = 5.990e-170 Identity = 281/403 (69.73%), Postives = 309/403 (76.67%), Query Frame = 2
Query: 74 MAAEEKPKGWMGGD-VSPLLLAAGIGAVGTWLWW-NRRPLPTSN--TMSGRVCVVTGANAGIGKATATALAQKGAHVVLACRSPIKCADACKEIRRKVPGAAVEALPLDLSSVESIRGFVELFRKTRLPLHVLVNNAGIIPGEPGLVRGMEKSMVVNHLGPFLLTHLLLPDLRKGTTXXXXXXXXXXXXAGDRHGGRGKSSWNNNRTDSASRIVNVGSRLEKRGSLWAAVGSGVGTAAAAVPLGTRWFEPPPGKNHDAFQLYGSSKLCNQLFTFELDRRLKATQKPTLSAGATAPGGREREVIANIVTPGVVNTGLGDSMTSPWVAWVAAPLKAAFMRTVGKGAETVVWAATSPEIEAIGGGKFFGDMKEVPCSDASRDEDLARQLWKASEVASGLDESERIL 1270
M E++PK W GGD + PLLLA GAVG WLWW NR+PLPTS+ TMSGRVC+VTGANAGIGKATATALAQ+GA VVLACRSP KCA AC++IRR+VPGAA++AL LDLSSVESIRGFVE F KT LPLHVLVNNAG +PG +RGME+SMVVNHLGPFLLTHLLLPDLRK + HG R +S N T +SRIVNVGSRLEKRG+LWAA S G AVP GTRWF+PPP K HDAF LYGSSKLCN LFTFELDRRL+A + GGR R V ANIVTPG+VNT LGD SPWVAW APLKAA MRT KGAETVVWAATSPEIE IGGGKFFGD EVPCSDASRDEDLARQLW+A+E A GL+ESER++
Sbjct: 1 MPEEKQPKPWGGGDHLYPLLLA---GAVGAWLWWRNRQPLPTSSNTTMSGRVCIVTGANAGIGKATATALAQRGARVVLACRSPTKCAAACEDIRRRVPGAALDALSLDLSSVESIRGFVETFHKTGLPLHVLVNNAG----KPGTIRGMEQSMVVNHLGPFLLTHLLLPDLRKASAAAAAPASAIG------HGDREQSPENVPGTGPSSRIVNVGSRLEKRGNLWAAAVSD-GGGDTAVPPGTRWFQPPPRKKHDAFGLYGSSKLCNMLFTFELDRRLEAARS----------GGR-RLVTANIVTPGIVNTKLGDGTVSPWVAWAGAPLKAALMRTADKGAETVVWAATSPEIEEIGGGKFFGDKNEVPCSDASRDEDLARQLWEATEQAVGLEESERVV 378
BLAST of mRNA_P-littoralis_Contig164.52.1 vs. uniprot
Match: A0A3M6UUN6_POCDA (Uncharacterized protein n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6UUN6_POCDA) HSP 1 Score: 166 bits (419), Expect = 7.510e-42 Identity = 126/353 (35.69%), Postives = 172/353 (48.73%), Query Frame = 2
Query: 203 MSGRVCVVTGANAGIGKATATALAQKGAHVVLACRSPIKCADACKEIRRKVPGAAVEALPLDLSSVESIRGFVELFRKTRLPLHVLVNNAGI-IPGEPGLVRGMEKSMVVNHLGPFLLTHLLLPDLRKGTTXXXXXXXXXXXXAGDRHGGRGKSSWNNNRTDSASRIVNVGSRLEKRGSLWAAVGSGVGTAAAAVPLGTRWFEPPPGKNHDAFQLYGSSKLCNQLFTFELDRRLKATQKPTLSAGATAPGGREREVIANIVTPGVVNTGLGDSMTSPWVAWVAAPLKAAFM-RTVGKGAETVVWAATSPEIEAIGGGKFFGDMKEVPCSDASRDEDLARQLWKASEVASGLDE 1255
+ GRV +VTG N GIG T L + V++ACR + A K+IR ++P A VE + LDL+S+ SIR FV F+K LPLH+LVNNAGI IP G E VNHLG F LT+LLL DL K + D SR+V + S G + L ++++ P + Y SKL N LFT+EL +RL+ + P V AN V PGVVNT L + PW+ + + A F+ +T +GAE ++ A SPE+E+ GG K+F + + SD S ED+ R+LWKAS +G+ E
Sbjct: 33 LDGRVAIVTGGNKGIGLETVRGLCKAQMTVIIACRDTAEAEKAIKKIREELPQAEVEYMELDLASLASIRKFVMNFKKKGLPLHILVNNAGIMIPPYSKTEDGFELQFGVNHLGHFALTNLLLDDLIKSGSP-----------------------------DRCSRVVTLSSEAHIPGKI------------NFEDLQSKYYYSP-------YSGYSQSKLANILFTYELQKRLEERESP---------------VTANAVHPGVVNTDLFQHI--PWIMRMPQNVLAYFLFKTPQQGAENSIYVALSPELESKGG-KYFVNCQSTQSSDESYSEDVQRRLWKASCELTGIPE 319
BLAST of mRNA_P-littoralis_Contig164.52.1 vs. uniprot
Match: A0A383WIR5_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383WIR5_TETOB) HSP 1 Score: 163 bits (412), Expect = 2.640e-41 Identity = 130/354 (36.72%), Postives = 171/354 (48.31%), Query Frame = 2
Query: 203 MSGRVCVVTGANAGIGKATATALAQKGAHVVLACRSPIKCADACKEI-RRKVPGAAVEALPLDLSSVESIRGFVEL----FRKTRLPLHVLVNNAGIIPGEPGLVRGMEKSMVVNHLGPFLLTHLLLPDLRKGTTXXXXXXXXXXXXAGDRHGGRGKSSWNNNRTDSASRIVNVGSRLEKRGSLWAAVGSGVGTAAAAVPLGTRWFEPPPGKNHDAFQLYGSSKLCNQLFTFELDRRLKATQKPTLSAGATAPGGREREVIANIVTPGVVNTGLGDSMTSPWVAWVAAPLKAAFMRTVGKGAETVVWAATSPEIEAIGGGKFF-GDMKEVPCSDASRDEDLARQLWKASEVASG 1246
M + C+VTGANAGIGK L KGAHVV+ACR+ C+ A +E+ +R++PG + LDL+ ++S+R F + + ++ PL VLVNNAG++ PG G ++ + VNH GPFLLT+LLLP + G SRIVNV SR G L AV G VP + WF Y SKLCN LFT EL RRL+ R +IA V+PG VNT + S+ PW+ +A L + RT +GAE V+AATS E+ A F D K P + + D+ LA LW AS A G
Sbjct: 1 MEKQYCIVTGANAGIGKEITAGLMAKGAHVVMACRNMDACSVAQQELHQRQLPGTC-QCSRLDLADLQSVRSFAKQQQQELQSSKQPLRVLVNNAGVMGVGPG-PGGADQHLAVNHFGPFLLTNLLLPCMEPG-----------------------------------SRIVNVASRAHYWGRL--AVKDG-----CVVPGWSNWFPQ-----------YAQSKLCNVLFTAELQRRLQG-----------------RGIIATSVSPGFVNTTIFRSLP-PWLGSLATALAPSIARTPAEGAEVAVYAATSSELSAERPVPLFLHDCKATPPAKLAEDKQLAADLWAASAAAVG 281
BLAST of mRNA_P-littoralis_Contig164.52.1 vs. uniprot
Match: A0A6I1Z6X8_9BACT (SDR family NAD(P)-dependent oxidoreductase n=1 Tax=Calditrichaeota bacterium TaxID=2212469 RepID=A0A6I1Z6X8_9BACT) HSP 1 Score: 159 bits (402), Expect = 5.330e-40 Identity = 124/351 (35.33%), Postives = 172/351 (49.00%), Query Frame = 2
Query: 203 MSGRVCVVTGANAGIGKATATALAQKGAHVVLACRSPIKCADACKEIRRKVPGAAVEALPLDLSSVESIRGFVELFRKTRLPLHVLVNNAGIIPGEPGLVR-GMEKSMVVNHLGPFLLTHLLLPDLRKGTTXXXXXXXXXXXXAGDRHGGRGKSSWNNNRTDSASRIVNVGSRLEKRGSLWAAVGSGVGTAAAAVPLGTRWFEPPPGKNHDAF-QLYGSSKLCNQLFTFELDRRLKATQKPTLSAGATAPGGREREVIANIVTPGVVNTGLGDSMTSPWVAWVAAPLKAAFMRTVGKGAETVVWAATSPEIEAIGGGKFFGDMKEVPCSDASRDEDLARQLWKASEVASGL 1249
M +VC+VTGAN GIGKATA LA +GA V++ CR+ A +EI K AA+E + DL+S+E++R E ++ LHVLVNNAG+ L G E + VNHL P LLT+LLL D+ KG+ +RIVN+ S + + G + F G+ H + + Y SKL N LFT+EL RRL T V AN V PG+V + LG T ++ +A L FMR+ +GAETV++ A+SPE+ + G K+F + + V S AS D LA++LW+ SE +GL
Sbjct: 1 MKEKVCLVTGANRGIGKATALGLALRGATVIIHCRNRQLGETAREEIVAKTGNAAIEVMVADLASLEAVRRLAEAVQRRHATLHVLVNNAGLAKRRHTLTEDGFETTFAVNHLAPLLLTNLLL-DILKGSAP--------------------------------ARIVNLASMVHRWGRIS--------------------FHDLMGQRHYSMGRAYNQSKLANVLFTYELARRLDGTG-----------------VAANCVHPGMVVSDLGREYTG-FMGLIANKLWRPFMRSPERGAETVIYLASSPEVAGVTG-KYFANRRAVRSSRASHDPALAQRLWEVSERLTGL 279
BLAST of mRNA_P-littoralis_Contig164.52.1 vs. uniprot
Match: UPI000E3D0C6C (SDR family oxidoreductase n=1 Tax=Paraliobacillus quinghaiensis TaxID=470815 RepID=UPI000E3D0C6C) HSP 1 Score: 154 bits (390), Expect = 2.270e-38 Identity = 118/347 (34.01%), Postives = 166/347 (47.84%), Query Frame = 2
Query: 215 VCVVTGANAGIGKATATALAQKGAHVVLACRSPIKCADACKEIRRKVPGAAVEALPLDLSSVESIRGFVELFRKTRLPLHVLVNNAGII-PGEPGLVRGMEKSMVVNHLGPFLLTHLLLPDLRKGTTXXXXXXXXXXXXAGDRHGGRGKSSWNNNRTDSASRIVNVGSRLEKRGSLWAAVGSGVGTAAAAVPLGTRWFEPPPGKNHDAFQLYGSSKLCNQLFTFELDRRLKATQKPTLSAGATAPGGREREVIANIVTPGVVNTGLGDSMTSPWVAWVAAPLKAAFMRTVGKGAETVVWAATSPEIEAIGGGKFFGDMKEVPCSDASRDEDLARQLWKASEVASGLD 1252
V ++TGAN+G+GKATA LA+ GAH+V+ CR+ + A KE+R K V + DL S ESIR F F++ L VL+NNAG+I PG G E VNHLG FLLT+LLL DL +T +RI+ V S K G + + + KN+ ++ Y SKL N LFT+EL RRL+ T + N + PG V T +G + S + ++ LK F +T KGAET+V+ ATS ++ + G K+F +E+ S+ S DE LA+ LW SE +G++
Sbjct: 6 VVIITGANSGMGKATAIELAKTGAHIVMVCRNQTRGEAALKEVREKTGNEQVTLMLCDLGSQESIRSFCATFKEKYQRLDVLINNAGVILPGRHETTDGFELQFGVNHLGHFLLTNLLL-DLMTSSTP--------------------------------ARIIVVSSGAHKIGKI-------------------HFDDINLTKNYTLWRAYAQSKLANILFTYELARRLEGTG-----------------ITVNCLHPGAVATSMGINRESGFGTFITRLLKP-FFQTPEKGAETIVFLATSSDVSEVSG-KYFYQKEEIRSSNRSHDEKLAKNLWIKSEEWTGIN 281
BLAST of mRNA_P-littoralis_Contig164.52.1 vs. uniprot
Match: A0A3B4EF25_PYGNA (Dehydrogenase/reductase SDR family member 13-like n=2 Tax=Serrasalmidae TaxID=42495 RepID=A0A3B4EF25_PYGNA) HSP 1 Score: 152 bits (384), Expect = 3.640e-37 Identity = 125/378 (33.07%), Postives = 183/378 (48.41%), Query Frame = 2
Query: 125 LLLAAGIGAVGTW--LWWNRRPLPTSNTMSGRVCVVTGANAGIGKATATALAQKGAHVVLACRSPIKCADACKEIRRKVPGAAVEALPLDLSSVESIRGFVELFRKTRLPLHVLVNNAGIIPGEPGLVR-GMEKSMVVNHLGPFLLTHLLLPDLRKGTTXXXXXXXXXXXXAGDRHGGRGKSSWNNNRTDSASRIVNVGSRLEKRGSLWAAVGSGVGTAAAAVPLGTRWFEPPPGKNHDAFQLYGSSKLCNQLFTFELDRRLKATQKPTLSAGATAPGGREREVIANIVTPGVVNTGLGDSMTSPWVAWVAAPLKAAFMRTVG-KGAETVVWAATSPEIEAIGGGKFFGDMKEVPCSDASRDEDLARQLWKASEVASG 1246
LLL IGA + ++ +R+ + T+ G+ +VTG+N GIGKATA ALA +GA V+LACRS + DA ++IRR+ V +PLDL+S++S+ F E F K+ L +L+NNAG+ PG G+ + VNH+GPFLLT+LLL L++ SR++NV S VG +GT + T + D F++Y SKLCN LFT EL +RLK T S + PG V + +G +M S W +A L F +T G++T ++ A IE + G ++F D K ++D+++AR+LW SE G
Sbjct: 4 LLLTVPIGAYFIFYRIFVHRKTFTNAVTLYGKTVIVTGSNTGIGKATALALALRGARVILACRSKQRGEDAVRDIRRESGNDEVVFMPLDLASMKSVCSFTETFLKSESRLDLLINNAGL--AAPGCTEDGLGLVLGVNHIGPFLLTNLLLDRLKECAP---------------------------------SRVINVSS-----------VGHDLGTIDFNC-INTHKRLGMGSSDVDIFKMYCHSKLCNVLFTHELAKRLKGTNVTCYS-----------------LHPGSVRSEIGRTMNS-WYMLIAKYLMQMFFQTDAMSGSQTTLYCALQEGIEPLSG-RYFSDCKVREVKPEAKDDEIARKLWDVSERLCG 315
BLAST of mRNA_P-littoralis_Contig164.52.1 vs. uniprot
Match: A0A534WZR6_9DELT (SDR family oxidoreductase n=2 Tax=Bacteria TaxID=2 RepID=A0A534WZR6_9DELT) HSP 1 Score: 149 bits (377), Expect = 1.300e-36 Identity = 123/352 (34.94%), Postives = 166/352 (47.16%), Query Frame = 2
Query: 203 MSGRVCVVTGANAGIGKATATALAQKGAHVVLACRSPIKCADACKEIRRKVPGAAVEALPLDLSSVESIRGFVELFRKTRLPLHVLVNNAGIIP-GEPGLVRGMEKSMVVNHLGPFLLTHLLLPDLRKGTTXXXXXXXXXXXXAGDRHGGRGKSSWNNNRTDSASRIVNVGSRLEKRGSLWAAVGSGVGTAAAAVPLGTRWFEPPPGKNHDAFQLYGSSKLCNQLFTFELDRRLKATQKPTLSAGATAPGGREREVIANIVTPGVVNTGLGDSMTSPWVAWVAAPLKAAFMRTVGKGAETVVWAATSPEIEAIGGGKFFGDMKEVPCSDASRDEDLARQLWKASEVASGLDE 1255
M+GRVCVVTGA++GIG+ATA ALA GA + L CR+ + + +R + AAV DLSS IR + +HVLVNNAG++ V G+E VNHL FLLTHLLL LR +RIVNV S + G++ LG + + A ++YGSSKL N LFT+EL RRL+ T+ V AN + PG V T LG + + +A L F RT +GA T ++ A+SP +E + G ++F D KE S AS D DLA +LW AS +G+++
Sbjct: 1 MTGRVCVVTGASSGIGRATARALACLGATLALVCRNRGRGEETVAALRTESGNAAVALFLADLSSQAEIRRLAAELSECYPAVHVLVNNAGVVNLRRSTTVDGIETVFAVNHLAYFLLTHLLLERLRGSAP---------------------------------ARIVNVASDAHRFGTI------------DLDDLGH-------ARRYRAMRVYGSSKLANILFTYELARRLEGTR-----------------VTANCLHPGAVATRLGQN--NGRLATALTKLLRPFFRTPEQGAATAIYLASSPAVEGVSG-RYFVDCKEARSSRASYDTDLALRLWHASARLTGIEQ 280
BLAST of mRNA_P-littoralis_Contig164.52.1 vs. uniprot
Match: UPI001CF3CC46 (dehydrogenase/reductase SDR family member on chromosome X-like n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF3CC46) HSP 1 Score: 150 bits (380), Expect = 1.310e-36 Identity = 111/353 (31.44%), Postives = 168/353 (47.59%), Query Frame = 2
Query: 203 MSGRVCVVTGANAGIGKATATALAQKGAHVVLACRSPIKCADACKEIRRKVPGAAVEALPLDLSSVESIRGFVELFRKTRLPLHVLVNNAGIIPGEPGLVR-GMEKSMVVNHLGPFLLTHLLLPDLRKGTTXXXXXXXXXXXXAGDRHGGRGKSSWNNNRTDSASRIVNVGSRLEKRGSLWAAVGSGVGTAAAAVPLGTRWFEPPPGKNHDAFQLYGSSKLCNQLFTFELDRRLKATQKPTLSAGATAPGGREREVIANIVTPGVVNTGLGDSMTSPWVAWVAAP-LKAAFMRTVGKGAETVVWAATSPEIEAIGGGKFFGDMKEVPCSDASRDEDLARQLWKASEVASGLDE 1255
+ GRV ++TG N GIG T L + V++ACR A KE++ + P A V+ + LDL S++SI+ F + F++ LPLH+L+NNAGI+ G G E + +NHLG F LT+LLL +L K + + SRI+ + S L ++G + ++ + K + A + Y SKL N LF++EL+RRLK P V +N V PG+VNT L + PW + L +T +GA++ ++ A SPEIE +GG +F + S+ S EDL ++LWK S +G+ E
Sbjct: 33 LDGRVAIITGGNRGIGLETVKGLCKAHVTVIIACRDENSAEKAIKEVKEEFPAAKVDFMKLDLGSLKSIQTFAKNFKEKGLPLHILINNAGIMCPPYGTTEDGFELTFGINHLGHFALTNLLLDELIKSGSQ-----------------------------ERCSRIITLSSVLHRQGKI-------------------KFDDLSSKKYYSALEAYNQSKLANVLFSYELNRRLKEKNCP---------------VTSNAVHPGIVNTELFHGL--PWCLKIPQDGLVYLLFKTPKQGADSSLYVALSPEIEGLGG-LYFVNSSPSQSSEESHREDLQKKLWKISCELTGIPE 319
BLAST of mRNA_P-littoralis_Contig164.52.1 vs. uniprot
Match: UPI0009E625CD (dehydrogenase/reductase SDR family member on chromosome X-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E625CD) HSP 1 Score: 150 bits (378), Expect = 2.370e-36 Identity = 127/351 (36.18%), Postives = 169/351 (48.15%), Query Frame = 2
Query: 209 GRVCVVTGANAGIGKATATALAQKGAHVVLACRSPIKCAD-ACKEIRRKVPGAAVEALPLDLSSVESIRGFVELFRKTRLPLHVLVNNAGIIPGEPGLVR-GMEKSMVVNHLGPFLLTHLLLPDLRKGTTXXXXXXXXXXXXAGDRHGGRGKSSWNNNRTDSASRIVNVGSRLEKRGSLWAAVGSGVGTAAAAVPLGTRWFEPPPGKNHDAFQL-YGSSKLCNQLFTFELDRRLKATQKPTLSAGATAPGGREREVIANIVTPGVVNTGLGDSMTSPWVAWVAAPLKAAFM-RTVGKGAETVVWAATSPEIEAIGGGKFFGDMKEVPCSDASRDEDLARQLWKASEVASGL 1249
G+V +VTG N GIG T L + V++ACR +K AD A KE++ ++P A VE + LDL S+ S+R FV FRK LPLH+LVN+AGI+ G G E VNHLGPF LT+LLL DL K T SRIV + S A VP GT FE K++ + L Y SKL N LFT+EL R LK P V AN++ PGVVNT L + W+ + + A F+ +T +GA+ ++ A S E+E GG ++F + SD S ED+ R+LWK S +G+
Sbjct: 35 GQVAIVTGGNKGIGYETVKGLCKAHMTVIMACRD-VKAADKAIKELKEELPQANVEYMELDLGSLASVRKFVTNFRKKGLPLHILVNSAGIMFPPYGTTEDGFELQFGVNHLGPFALTNLLLEDLIKSGL-----------------------------TGRFSRIVTLSSE-------------------AHVP-GTINFEDLQSKSYYSPYLGYSQSKLANILFTYELQRCLKEQNSP---------------VTANVLHPGVVNTDLFQHIH--WIVRIPQSVLAYFLFKTPKQGADNSIYVALSHELEGTGG-RYFVNCHSAQSSDESYREDVQRRLWKISCQLTGV 317
BLAST of mRNA_P-littoralis_Contig164.52.1 vs. uniprot
Match: A0A7S0RAS4_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RAS4_9CHLO) HSP 1 Score: 149 bits (377), Expect = 2.460e-36 Identity = 119/350 (34.00%), Postives = 175/350 (50.00%), Query Frame = 2
Query: 203 MSGRVCVVTGANAGIGKATATALAQKGAHVVLACRSPIKCADACKEIRRKVPGAAVEALPLDLSSVESIRGFVELFRKTRLPLHVLVNNAGIIPGEPGLVR-GMEKSMVVNHLGPFLLTHLLLPDLRKGTTXXXXXXXXXXXXAGDRHGGRGKSSWNNNRTDSASRIVNVGSRLEKRGSLWAAVGSGVGTAAAAVPLGTRWFEPPPGKNHDAFQLYGSSKLCNQLFTFELDRRLKATQKPTLSAGATAPGGREREVIANIVTPGVVNTGLGDSMTSPWVAWVAAPLK---AAFMRTVGKGAETVVWAATSPEIEAIGGGKFFGDMKEVPCSDASRDED--LARQLWKASE 1234
M+ ++C+V+GAN+GIG+ AT LAQ A V++ACRS + K+I+ VE PLDL+S+ S+R F + ++ + + VLV+NAGI+ G+ L G E + VN L PFLL LLLP L K T GG S SR+V VGS L+K+G L S + T A R F+ + F YG++KL L EL R+ +A PG V N+V+PGVVNT L M PW ++ P++ + M + +GA+T + ATSPE + + GK+F ++ ++ D +D LA +LW+ +
Sbjct: 3 MANKLCIVSGANSGIGRVIATELAQMQARVIMACRSEERTLPVVKDIKELTGNQNVEYWPLDLASLASVRSFAKRVGESPVGVDVLVSNAGIMNGKRELTADGFETNWQVNALAPFLLARLLLPSLSKAATTS---------------GG-----------SSPSRLVYVGSMLDKKGDL-----SDLDTVADPK----RRFDASNREKFSPFDTYGTAKLAATLLHTELARQAQAEH----------PG-----VCINVVSPGVVNTHLFQHMLPPWAKFMTGPIRFFLSFVMISPFEGAKTPLAVATSPEEQYLVTGKYFRNLHQMDRQDTIPIDDVALATKLWETCD 302 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig164.52.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig164.52.1 >prot_P-littoralis_Contig164.52.1 ID=prot_P-littoralis_Contig164.52.1|Name=mRNA_P-littoralis_Contig164.52.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=400bp MAAEEKPKGWMGGDVSPLLLAAGIGAVGTWLWWNRRPLPTSNTMSGRVCVback to top mRNA from alignment at P-littoralis_Contig164:263627..270781+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig164.52.1 ID=mRNA_P-littoralis_Contig164.52.1|Name=mRNA_P-littoralis_Contig164.52.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=7155bp|location=Sequence derived from alignment at P-littoralis_Contig164:263627..270781+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig164:263627..270781+ >mRNA_P-littoralis_Contig164.52.1 ID=mRNA_P-littoralis_Contig164.52.1|Name=mRNA_P-littoralis_Contig164.52.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1200bp|location=Sequence derived from alignment at P-littoralis_Contig164:263627..270781+ (Pylaiella littoralis U1_48)back to top |