mRNA_P-littoralis_Contig164.34.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig164.34.1
Unique NamemRNA_P-littoralis_Contig164.34.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig164.34.1 vs. uniprot
Match: D7FMA5_ECTSI (Kinesin motor domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMA5_ECTSI)

HSP 1 Score: 1610 bits (4168), Expect = 0.000e+0
Identity = 936/1179 (79.39%), Postives = 1000/1179 (84.82%), Query Frame = 1
Query:  286 ASDTDGAQDEDKLKLLIEFIPYVGLGDAARDNMVRSILCAADAEELVGTDDYGNTLLILACQYRRKALVPLILARSGGAIDLDAVNSEGACALHFACYKDSICVETAFLLLERGAKPEVVENTHGCTPLHYAAGAGDVDLCKRLIEKGARVNTWDFYQFTAVDYAKQSGATVCVAYLEEVSTPGATTAATVKSSPGRGGLVTISGVEVPS-GLLRDDSFDTVD-DDFRPRGRAAKATVGGGGENAAALGRQPSSGSDNFSVGGEDSGGGEGYWGRQGDPESGLAYYLNEKTGESMWEKDLLVQAQALHDDLNEEEPSPQLAQWLRQQTQRARLVAFLGRHDPLKIMQADDMLKRRLGDEEALFAELVKQYSAEEEPDFAALVEGAARGFRDHKIASPAPAATASDASIAATSRPSSPTTAPGATAKEEALETLTATLNRGVSVAAAVGSTKPGXXXXXXXXXXRPPTAPAQRPGLRTGARTSTAMLRMTRSAKDLLGTSS---LIPTAPAQLSPEDLKNLQEQAQKRLDDAKAAHEERLEAERKLHRDKAAEGEGAIARMEHDLKEASAEEERLRAKIEEQKQLAASLEGQLQEKLASQSGKVKALSEEAAALRSELKAAVEETQALSDVVDREQSGAASAAESSRRDMETKAKEESDLVHECQASVAAAKSDAERARREFAARRQVEQQNILDRLRGQLSLLQKELAAAKSKAAVDIXXXXXXXXXXXXXXXXTTALVVDVSAQREKMRRELEKAELTAKWNTLLQGLVLSESERRKKLHNKMEDLKGKIRVYVRVRPFSTKEKARGCTEAVTGQGTTTIAVQDPRVKEEKTFDFDQVWSGTEEQGNNQVNIFKDTGYLVTSTVDGYNVCIFAYGQTGSGKTYTMFGAGGIGGGIDATAGVCDGTAGVTPRAVLELFRVLKEREGQYEYSVKVSMFELYRDGLRDLLAKKGSHTKLVIKLAEHSGTGLVVVEGGVERDANDIKTMIDVIQVGAEGRTVSSTQMNSDSSRSHLLCSIVVTSTNRRTGSSLRGKLTLVDLAGSERVGKSGASGDQLKEAQSINKSLSALGDVIGALTTGVKHIPYRNHALTMMMSDSLGGNSKTLMFVCASPADYNASETINALQFAARCKSVTNSAGPGXXXXXXXXQVQALRRELQKLKGGDGGGNEAAKKPTQLARP 3807
            ASDT+    EDKLKLL+EFIPYVGLGDA RDNMVRSIL AADAEELVG DDYGNTLLILACQYR KALVPLILAR GGAID+DAVNSEGACALHFACYKDS+C +TA LLLERGA+PEVVE T+GCTPLHYAAGAGDV+LCKRLIEKGA+ NTWD YQ+TAVDYAKQSGAT CV YLEEVS PGA++ AT+K S GRGG+VT SGVE  S G +R+DSFDT D DDFRP+G A  A   G       +GRQPS+  + F  GGED G  EG+WGRQ DP+SG+AYYLNEKTGESMWEKDLL QAQAL  +  +E PSP L QWLRQQT +ARL+AFLGRHDPLK+MQ DDMLKRRLGDEE LF EL  QYSA+E+P   ALVEGAARGFRDHK+A+ AP                                                      XXXXXXXXXXRPPTAPAQ+PG+RTGARTST  L+ TRSAK+L+GT+S   L+PTAPAQLSPEDLK+LQEQAQKRLDD KAAHEE +EAERKLHRDK AEGEG IARMEHDL+EA++EEERLR+ I EQ++LA +LE QLQEKLASQSG+VK L                    LSDVVD+EQSGAA+AAESSRRDME KAKEESDLVHECQASVAAAKSDAERARREFAARRQ EQQNILDRL  QLSLLQKELAAAK+KAA DI  XXXXXXXXXXXXXX   L   VS QREKMR ELE+A LTA+ N LLQGLV+SESERRKKLHNKMEDLKGKIRVYVRVRPFS+KEKARGCTEAV+ QG +TIAVQDPRVKEEKTFDFDQVWSGTEEQGNNQVNIFKDTGYLVTSTVDGYNVCIFAYGQTGSGKTYTMFGAGGIGGG++A  GVCDGTAGVTPRAVLELFRVLKEREGQYEYSVK+SMFELYRDGLRDLLAKKGSHTKLVIKLAEHSGTGLVVVEGGVER+ANDIKTMIDVIQ+GAEGRTVSSTQMNSDSSRSHLLCSIVVTSTNRRTGSSLRGKLTLVDLAGSERVGKSGASGDQLKEAQSINKSLSALGDVIGALTTGVKHIPYRNHALTMMMSDSLGGNSKTLMFVCASPADYNASET+NALQFAARCKSVTNS GPGXXXXXXXXQVQALRRELQKLKGGDGGGNEAAKKPTQLARP
Sbjct:  105 ASDTEAGGQEDKLKLLVEFIPYVGLGDATRDNMVRSILSAADAEELVGRDDYGNTLLILACQYRCKALVPLILARGGGAIDVDAVNSEGACALHFACYKDSVCAQTAVLLLERGAEPEVVEKTYGCTPLHYAAGAGDVNLCKRLIEKGAKANTWDLYQYTAVDYAKQSGATDCVDYLEEVSAPGASSTATIKFSTGRGGIVTSSGVEASSTGFVREDSFDTEDGDDFRPQGNATSAIATGW---LGMVGRQPSAFHEGFETGGEDDG--EGFWGRQCDPDSGMAYYLNEKTGESMWEKDLLAQAQALRKEAGDENPSPHLQQWLRQQTHKARLIAFLGRHDPLKLMQVDDMLKRRLGDEETLFNELANQYSAQEDPTVTALVEGAARGFRDHKVAAAAPTXXXXXXXXXXXXX------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPPTAPAQKPGMRTGARTSTT-LQSTRSAKELVGTASSGKLVPTAPAQLSPEDLKHLQEQAQKRLDDVKAAHEETMEAERKLHRDKTAEGEGTIARMEHDLEEAASEEERLRSNIGEQRKLAETLERQLQEKLASQSGEVKVLXXXXXXXXXXXXXXXXXXXXLSDVVDKEQSGAAAAAESSRRDMEMKAKEESDLVHECQASVAAAKSDAERARREFAARRQAEQQNILDRLGEQLSLLQKELAAAKAKAATDISRXXXXXXXXXXXXXXXXXLEATVSEQREKMRAELERAILTAERNGLLQGLVMSESERRKKLHNKMEDLKGKIRVYVRVRPFSSKEKARGCTEAVSAQGKSTIAVQDPRVKEEKTFDFDQVWSGTEEQGNNQVNIFKDTGYLVTSTVDGYNVCIFAYGQTGSGKTYTMFGAGGIGGGVNANEGVCDGTAGVTPRAVLELFRVLKEREGQYEYSVKLSMFELYRDGLRDLLAKKGSHTKLVIKLAEHSGTGLVVVEGGVEREANDIKTMIDVIQLGAEGRTVSSTQMNSDSSRSHLLCSIVVTSTNRRTGSSLRGKLTLVDLAGSERVGKSGASGDQLKEAQSINKSLSALGDVIGALTTGVKHIPYRNHALTMMMSDSLGGNSKTLMFVCASPADYNASETLNALQFAARCKSVTNSTGPGXXXXXXXXQVQALRRELQKLKGGDGGGNEAAKKPTQLARP 1265          
BLAST of mRNA_P-littoralis_Contig164.34.1 vs. uniprot
Match: A0A835Z134_9STRA (Kinesin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z134_9STRA)

HSP 1 Score: 546 bits (1406), Expect = 3.230e-180
Identity = 291/407 (71.50%), Postives = 332/407 (81.57%), Query Frame = 1
Query: 2587 ESERRKKLHNKMEDLKGKIRVYVRVRPFSTKEKARGCTEAVTGQGTTTIAVQDPRVKEEKTFDFDQVWSGTEEQGNNQVNIFKDTGYLVTSTVDGYNVCIFAYGQTGSGKTYTMFGAGGIGGGIDATAGVCDGTAGVTPRAVLELFRVLKEREGQYEYSVKVSMFELYRDGLRDLLAKKGSHTKLVIKLAEHSGTGLVVVEGGVERDANDIKTMIDVIQVGAEGRTVSSTQMNSDSSRSHLLCSIVVTSTNRRTGSSLRGKLTLVDLAGSERVGKSGASGDQLKEAQSINKSLSALGDVIGALTTGVKHIPYRNHALTMMMSDSLGGNSKTLMFVCASPADYNASETINALQFAARCKSVTNSAGPGXXXXXXXXQVQALRRELQKLKGGDGGGNEAAKKPTQLARP 3807
            E+ERRK+LHNK+EDLKGKIRVYVRVRP S+KE  R C EAV  +G  ++ VQD +    +T+DFDQVW+G+E  GN Q  IFKDTGYLVTS VDGYNVCIFAYGQTGSGKT+TMFGAGG+GGG++   G C   AGV PRAV ELFRVLKER+ QY Y+V V+MFELYRDGLRDL A+ G   KLVIKLAEHSGTGLVVVEGG+E  AN +K ++D I  GA+ R VSSTQMN+DSSRSHL+CS+V++STN RTGS +RGKLTLVDLAGSERVGKSGA+G+QLKEAQSINKSLSALGDVI ALT+G  HIPYRNH LTMMMSDSLGGN+KTLMFVCASPADYN SETIN+LQFAARCK VTNS+  G        Q+QAL+REL +LK  + G   A KKP QL RP
Sbjct:    4 ETERRKQLHNKVEDLKGKIRVYVRVRPLSSKEVERACAEAVASEGKQSVVVQDKKNGANRTWDFDQVWAGSELGGNTQEAIFKDTGYLVTSAVDGYNVCIFAYGQTGSGKTFTMFGAGGVGGGMNTATGECGPGAGVAPRAVGELFRVLKERQPQYTYNVTVTMFELYRDGLRDLQARHGDGAKLVIKLAEHSGTGLVVVEGGIETVANSVKDLVDTIAAGADRRAVSSTQMNADSSRSHLICSMVISSTNTRTGSVVRGKLTLVDLAGSERVGKSGAAGEQLKEAQSINKSLSALGDVIAALTSGSAHIPYRNHPLTMMMSDSLGGNAKTLMFVCASPADYNTSETINSLQFAARCKDVTNSSVAGGAA-----QLQALQRELNRLKAPENG--TAPKKPAQLGRP 403          
BLAST of mRNA_P-littoralis_Contig164.34.1 vs. uniprot
Match: A0A7S3HTU3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HTU3_9STRA)

HSP 1 Score: 501 bits (1290), Expect = 1.070e-154
Identity = 409/1166 (35.08%), Postives = 564/1166 (48.37%), Query Frame = 1
Query:  397 LCAADAEELVGTDDYGNTLLILACQYRRKALVPLILARSGGAIDLDAVNSEGACALHFACYKDSICVETAFLLLERGAKPEVVENTHGCTPLHYAAGAGDVDLCKRLIEKGARVNTWDFYQFTAVDYAKQSGATVCVAYLEEVSTPGATTAATVKSSPGRGGLVTISGVEVPSGLLRDDSFDTVDDDFRPRGRAAKATVGGGGENAAALGRQPSSGSDNFSVGGEDSGGGEGYWGRQGDPESGLAYYLNEKTGESMWEKDLL-------VQAQALHDDLN------------------EEEPSPQLAQWLRQQTQRARLVAFLGRHDPLKIMQADDMLKRRLGDEEALFAELVKQYSAEEEPDFAALVEGAARGFRDHKIASPAPAATASDASIAATSRPSSPTTAPGATAKEEALETLTATLNRGVSVAAAVGSTKPGXXXXXXXXXXRPPTAPAQRPGLRTGARTSTAMLRMTRSAKDLLGTSSLIPTAPAQLSPEDLKNLQEQAQKRLDDAKAAHEERLEAERKLHRDKAAEGEGAIARMEHDLKEASAEEERLRAKIEEQKQLAASLEGQLQEKLASQSGKVKALSEEAAALRSELKAAVEETQALSDVVDREQSGAASAAESSRRDMETKAKEESDLVHECQASVAAAKSDAERARREFAARRQVEQQNILDRLRG----QLSLLQKELAAAKSKAAVDIXXXXXXXXXXXXXXXXTTALVVDVSAQREKMRRELEKAELTAKWNTLLQGLVLSESERRKKLHNKMEDLKGKIRVYVRVRPFSTKEKARGCTEAVTGQGTTTIAVQD---PRVKEEKTFDFDQVWSGTEEQGNNQVNIFKDTGYLVTSTVDGYNVCIFAYGQTGSGKTYTMFGAGGIGGGIDATAGVCDGTAGVTPRAVLELFRVLKEREGQYEYSVKVSMFELYRDGLRDLLA-----KKGSHTK-------LVIKLAEHSGTGLVVVEGGVERDANDIKTMIDVIQVGAEGRTVSSTQMNSDSSRSHLLCSIVVTSTNRRTGSSLRGKLTLVDLAGSERVGKSGASGDQLKEAQSINKSLSALGDVIGALTTGVKHIPYRNHALTMMMSDSLGGNSKTLMFVCASPADYNASETINALQFAARCKSVTNS--AGPGXXXXXXXXQVQALRRELQKLKGG 3756
            L A   E++   D+YGNTLL+LACQYR + LV ++L +     D +AVNS GAC LHFACY++S  +  A +LL+ GA P+V E+T GCTPLHY AG GD++ CK L+  GA++   D+Y +T VDYA ++G T   A+L+                                               +    A KAT+G   +N  +   +P   S+   +           W    DP+SG  YY++ KTGE +WE +L        VQ  A  D+ +                  ++ P    A  +RQ TQ ARLV F   HDP ++++ D +     G E  L  EL ++Y  +  P+  A                                              +  L+ L  T  +  +    V    P                  +R             L+           +S I +   +     +  L+ Q +  LD +K + EE +++ +      +  G  A+ +++ +L+ A AE + L+A++ E           L + L+ +  K+ +L     +  S L A  EE      ++ REQ  A                                K+D    +++FA ++  E ++  D++R      +  L +ELA  K++ A +I                T     +  A                 +N  L   +  E   RKKLHN MED+KGKIRVYVRVRPFS  E A+ C E+V   G  T+ V+    P  K  K +DFDQV+ G  + GN Q ++FKDT +L+ S VDGYNVCIFAYGQTG+GK++TM GA  I   +    G  D  AG+TPRAV ELFR+L ER  Q ++ V+V MF+LYRDGL DLL      KKG           L I LAEHS TGLV VEG     A     ++ +   G+  RT +STQMN++SSRSHL+CS+VV  TN+R+G    GKLTLVDLAGSERV KSGA+G+ LKEAQSINKSLSALGDVI ALTT  +H+PYRNH LTM+MSDS+GGN+KTLMFV  SPADYN  E+ ++L FA RCK +TN+  AGPG        QV AL++EL KLK G
Sbjct:    2 LSALSVEDIDSQDEYGNTLLLLACQYRCEDLVRIMLNKGA---DANAVNSSGACCLHFACYRESASIGVAKILLKSGADPDVAESTFGCTPLHYCAGTGDIEFCKLLLSYGAQIGALDYYNYTCVDYASEAGMTEVAAFLQ-----------------------------------------------KKLSAATKATMGQSSKNLMSPSSKPYGNSNTIDIAN---------WESHIDPDSGGKYYIHMKTGECLWESELKQRIQQYQVQVGASRDENDRAGKNDDGIRVRAASETPDKAPKISEADLIRQATQ-ARLVVFFTTHDPSRLVEVDKLTAEYSGREAQLLKELCEKYKVDGGPELVAF---------------------------------------------QAKLQELRPTGPKNTTQVNDVNQIDPLLLQDLTRE---------ERKKFEAQLEEEMHALKXXXXXXXXXXKASFIQSISEKEGM--IAKLKSQIES-LDRSKLSTEEDMKSMQDKLSTMSMSGGQAMEQLQSELEAAQAECKALKAQLAE-----------LHQTLSYEREKLHSLE----STMSNLTAGNEE------LIMREQKAAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKTDLNHLKQDFA-KKSDELKDQHDQMRKAKDRDIDRLSRELAEMKAQYAQEISAAHMQITDFQKTVEETLRRAEEAEAXXXXXXXXXXXXXXXXXYNAQLHKDLQREQLARKKLHNDMEDMKGKIRVYVRVRPFSKSELAKNCEESVVKDGKMTVLVKGLGTPDAK--KYYDFDQVFGG--QDGNTQADVFKDTKHLIMSVVDGYNVCIFAYGQTGAGKSFTMIGAADIANCMSEN-GDFDDLAGITPRAVSELFRLLNERTAQIDFVVEVQMFQLYRDGLDDLLKEPIKRKKGXXXXXXXXXXXLKITLAEHSPTGLVYVEGAQTLAATTPGDVMKIFAKGSARRTTASTQMNAESSRSHLICSLVVKLTNKRSGKESIGKLTLVDLAGSERVDKSGAAGEVLKEAQSINKSLSALGDVISALTTNQQHVPYRNHPLTMLMSDSIGGNAKTLMFVNTSPADYNTPESNSSLAFANRCKDITNAVAAGPGVQAA----QVSALKKELAKLKKG 1019          
BLAST of mRNA_P-littoralis_Contig164.34.1 vs. uniprot
Match: A0A812VNR0_SYMMI (Kinesin-like protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812VNR0_SYMMI)

HSP 1 Score: 424 bits (1091), Expect = 4.500e-132
Identity = 242/436 (55.50%), Postives = 307/436 (70.41%), Query Frame = 1
Query: 2515 MRRELEKAELTAKWNTLLQGLVLSESERRKKLHNKMEDLKGKIRVYVRVRPFSTKEKARGCTEAVTGQGTTTIAVQDPR-VKEEKTFDFDQVWSGTEEQGNNQVNIFKDTGYLVTSTVDGYNVCIFAYGQTGSGKTYTMFGAGGIGGGIDATAGVCDGTAGVTPRAVLELFRVLKEREGQYEYSVKVSMFELYRDGLRDLLA-KKGSHTK---LVIKLAEHSGTGLVVVEGGVERDANDIKTMIDVIQVGAEGRTVSSTQMNSDSSRSHLLCSIVVTSTNRRTGSSLRGKLTLVDLAGSERVGKSGASGDQLKEAQSINKSLSALGDVIGALTTGVKHIPYRNHALTMMMSDSLGGNSKTLMFVCASPADYNASETINALQFAARCKSVTNSAGPGXXXXXXXXQVQALRRELQKLKGGDGGGNEAAKKPTQLARP 3807
            M +E+E+A    ++N  L   +  E + RK+LHN++ED+KGKIRVYVR+RPFS  E ++GCTEAV   G  T+ V+  +    +K+FDFDQV+ G+  +GN+QV++FKDT +L+ S +DGYNVCIFAYGQTGSGKT+TM GA  IG  +    G  D  AG+TPRAV E+FR+L ER  Q  + V V MF+LYRDGL DLL  +KG   K   L I LAEHS TGLV  EG     A     ++ + ++GA  RT +STQMN++SSRSHL+CS+V+T TNRRTG++  GKLT+VDLAGSERV KSGA G+ LKEAQSINKSLSALGDVI +LT+   H+PYRNH LTM+MSDS+GGN+KTLMFV  SPADYN  E+ ++L FA RCK VTNS            Q+ AL++EL KLK G+     AA    +LARP
Sbjct:  100 MMQEIEEARAVQQFNAQLHRDLNREQQARKRLHNEIEDMKGKIRVYVRIRPFSQSEASKGCTEAVLKDGKMTVMVKGAKGADSKKSFDFDQVFGGSNAEGNSQVDVFKDTKHLMLSVIDGYNVCIFAYGQTGSGKTFTMIGAADIGSCL-RDDGEFDELAGITPRAVSEIFRLLNERSAQCTFEVSVQMFQLYRDGLEDLLHNRKGGDAKGGNLKITLAEHSPTGLV--EGANSMTATSAAEVMKIFEIGANRRTTASTQMNAESSRSHLICSLVITLTNRRTGTTTTGKLTVVDLAGSERVDKSGAQGEMLKEAQSINKSLSALGDVIASLTSNSSHVPYRNHPLTMLMSDSIGGNAKTLMFVNCSPADYNVQESNSSLSFANRCKDVTNSGSA--PPAQQVAQLNALKKELAKLKKGN-----AAAGGAKLARP 525          
BLAST of mRNA_P-littoralis_Contig164.34.1 vs. uniprot
Match: A0A7S2K2T0_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K2T0_9STRA)

HSP 1 Score: 443 bits (1139), Expect = 3.720e-130
Identity = 431/1257 (34.29%), Postives = 602/1257 (47.89%), Query Frame = 1
Query:  298 DGAQDEDKLKLLIEFIPYVGLGDAARDNMVRSILCAADAEELVGTDDYGNTLLILACQYRRKALVPLILARSGGAIDLDAVNSEGACALHFACYKDSICVETAFLLLERGAKPEVVENTHGCTPLHYAAGAGDVDLCKRLIEKGARVNTWDFYQFTAVDYAKQSGATVCVAYLEEVSTPGATTAATVKSSPGRGGLVTISGVEVPSGLL---RDDSFD--------TVDDDFRPRGRAAK----------------------ATVGGGGENAAALGRQPSSGSDNFSVGGE------------DSGGGEGYWGRQGDPES-GLAYYLNEKTGESMWEKDLLVQAQALHDDLNEEEPSPQLAQWLRQQTQRARL--VAFLGRHDPLKIMQADDMLK--------RRLGDEEALFAELVKQYSAEEEPDFAALVEGAARGFRDHKIASPAPAATASDASIAATSRPSSPTTAPGATAKEEALETLTATLNRGVSVAAAVG----------STKPGXXXXXXXXXXRPPTAPAQRPGLRTGARTSTAMLRMTRSAKDLLGTSSLIPTAPAQLSPEDLKNLQEQAQKRLDDAKAAHEERLEAERKLHRDKAAEGEGAIARME------HDLKEASAEEERLRAKIEEQKQLAASLEGQLQEKLASQSGKVKALSE-------EAAALRSELKAAVEETQALSDVVDREQSGAASAAESSRRDMETKAKEESDLVHECQASVAAAKSDAERARREFAARRQVEQQNILDRLRGQLS---LLQKELAAAK-SKAAVDIXXXXXXXXXXXXXXXXTTALVVDVSAQREKMRRELEKAELTAKWNTLLQGLVLSESERRKKLHNKMEDLKGKIRVYVRVRPFSTKEKARGCTEAVTGQGTTTIAVQDPRVK---EEKTFDFDQVWSGTEEQGNNQVNIFKDTGYLVTSTVDGYNVCIFAYGQTGSGKTYTMFGAGGIGGGIDATAGVCDGTAGVTPRAVLELFRVLKEREGQYEYSVKVSMFELYRDGLRDLLAKKG-SHTKLVIKLAEHSGTGLVVVEGGVERDANDIKTMIDVIQVGAEGRTVSSTQMNSDSSRSHLLCSIVVTSTNRRTGSSLRGKLTLVDLAGSERVGKSGASGDQLKEAQSINKSLSALGDVIGALTTGV-KHIPYRNHALTMMMSDSLGGNSKTLMFVCASPADYNASETINALQFAARCKSVTNSAGPGXXXXXXXXQVQALRRELQKLKGGDG-----GGNEAAKKP 3789
            D  ++E+ L LL E +P+ G GD + D +VR  +     + L   D  GNT+LILACQY    L+PL++ +     +++A N++GAC LHF CY D++ VET  LL++ GA  EVVE  +G TPLH+AA +G+  LC  L   GA  +T D      + YAKQ+    C+ +L  V                    V   GVE   G+    RD  F+        T +  +  R R                         A V G G++ +A     SS   +FS                DS        R  D ES  LA   N+   +S       V      D    ++        L+Q     R   ++  G  +PL   Q   +          +++  ++ L   + K+   E     +AL         D          T+ +  ++   RP +P         +  +   T    + V   A +G          STK               T       L TG++     L +     D  G+S          S +D   L ++ ++  DD +    E  E ERK + D     +G + ++         LKE   E E    K  + K  A SL  Q ++ +   +   K+L +       E   L+S LK   ++T +  D +  E        ES  R  E K    S LV E    +   K +      E  A+   E +++  +L+ +LS    LQ EL   +  K   ++                T A       +  +MR  +E+A+     N  L   +  E+ERRK LHNK+ED+KG+IRVYVR+RP ST E  RG  E +  +      +     K   + K+++FDQ+++GT + GN Q  +FKDT  L+TS VDG+NVCIFAYGQTGSGKTYTMFGAGG+        G  D  AG+ PRA  ELFRVLKE+E      V V+MFELY D LRDLL  +    TKL IKLAEH+ +G+V V+G +  +A+ +  ++++ + G+  RT SST+MN+DSSRSHL+ SIV +  N+RTG  ++GKLTLVDLAGSERVGKSGA+G+QLKEAQSINKSLSALGDVI ALT+G  KH+PYRN+ LTM+MSDS+GGN+KTLMFVC+SPADYN SET N+L FA RCK V N+            +V+ALR EL K+K  D       GN  A+KP
Sbjct:  174 DENEEEEMLDLLQEILPFFGQGDLSSDVIVRETIEKLPLDALEMPDRLGNTVLILACQYAAYDLIPLLIEKG---CNVNAQNNDGACCLHFPCYSDTVSVETVELLIDNGAYAEVVERQYGATPLHWAAASGNTFLCSLLANAGASPHTIDLSGCDPIAYAKQANNQDCIDFLSSVQ-------------------VGDKGVEEQQGMKEADRDSLFEWKRQKDENTEEIYYHNRSRKESLWENEFLEMDAGSAIEKARVDDAGVTGEGKSPSAADGGESSDDSSFSSSSTIDIPELSINIPVDSAK------RSADTESHALANSANDFDEDSEESVRNPVHVHNRSDKSKFKDKGSIPVSPLKQNANSGRKSDISGNGLGNPLYPRQRSLVAPTSSFPPSPQKISSQKHLQNSVTKETFEER---LSALQSKMEEQLMDQL--------TSLEKKMSTNRRPITP-------GMKRQISFNTQQHKQDVEAVAEMGAKIIHLQNEISTKDLEILALKREVMSLETK------LATGSKMPDRSLALETKDDDEKGSSD---------SKDDSGALSDEVEQLTDDLEVKVGELKELERK-YADLQVSLDGTVQQLSALEIKYKRLKEQLGESEASILKERKAKDEAMSLLEQTKQGMEVGAQVTKSLEDARNRDANEITRLQSNLKDIEQKTSSEIDRLCNENV----TKESVLRAKEVKI---SSLVDE----IEKLKQNHVEETGELVAKNVQEVESLQMKLKEELSGRSSLQDELKEERLMKMEKEVERNEALQKMQLYDQRATEA-----EKRLNEMRSMIEEAKGLFLNNEKLHRALHVETERRKTLHNKLEDMKGRIRVYVRIRPLSTGEIERGSNEVMKKEDQRMCVLLPDGEKGATDTKSWEFDQIFAGTAQDGNTQEAVFKDTRLLITSAVDGFNVCIFAYGQTGSGKTYTMFGAGGLVQNAQPD-GSMDPDAGLAPRAAAELFRVLKEKESSSNVQVTVTMFELYNDALRDLLVPEDREQTKLRIKLAEHTDSGMVEVDGAITEEASSVADLLELFKRGSLSRTTSSTKMNADSSRSHLITSIVTSVINKRTGRIVQGKLTLVDLAGSERVGKSGATGNQLKEAQSINKSLSALGDVICALTSGKNKHVPYRNNPLTMLMSDSIGGNAKTLMFVCSSPADYNRSETTNSLDFAKRCKDVRNNVESSHGNAA---KVKALRAELAKMKKQDSIGKRKSGNGLARKP 1348          
BLAST of mRNA_P-littoralis_Contig164.34.1 vs. uniprot
Match: A0A7S2B390_9STRA (Kinesin-like protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B390_9STRA)

HSP 1 Score: 402 bits (1032), Expect = 6.810e-123
Identity = 229/436 (52.52%), Postives = 299/436 (68.58%), Query Frame = 1
Query: 2509 EKMRRELEKAELTAKWNTLLQGLVLSESERRKKLHNKMEDLKGKIRVYVRVRPFSTKEKARGCTEAVTGQGTTTIAVQDPRV---KEEKTFDFDQVWSGTEEQGNNQVNIFKDTGYLVTSTVDGYNVCIFAYGQTGSGKTYTMFGAGG-IGGGIDATAGVCDGTAGVTPRAVLELFRVLKEREGQYEYSVKVSMFELYRDGLRDLLAKKG----SHTKLVIKLAEHSGTGLVVVEGGVERDANDIKTMIDVIQVGAEGRTVSSTQMNSDSSRSHLLCSIVVTSTNRRTGSSLRGKLTLVDLAGSERVGKSGASGDQLKEAQSINKSLSALGDVIGALTTGVKHIPYRNHALTMMMSDSLGGNSKTLMFVCASPADYNASETINALQFAARCKSVTN--SAGPGXXXXXXXXQVQALRRELQKLKGGDGGGNEAAKK 3786
            E M+  +++A++  + N +L   +  E ERRKKLH  +EDLKGKIRVYVRVRP S  E+ +GC  A T    T++    P     +++K FDFD++++GT + GN Q  +F+D   LV S ++G NVCIFAYGQTGSGKT+TM G GG IG  ID++ G     AGVTPRA +ELF VL+ER+      V VSM+ELY D L DLL +          L +KLA+H+ +GLV V+ G    A+ ++ + D+++ G   R+  ST+MN++SSRSHL+ S V+ STNRR+G    GKLTLVDLAGSERV KSGA G +LKEAQSINKSLSA+GDV+GALT+G KHIPYRNH LT +MSDS+GG++KT+M VC SPADYNA E++NAL FA RCK+V N  +A P         QVQ+LR+EL +LK   G  +E  KK
Sbjct:  134 ETMKDMIQEAKVVDQRNAVLDRDMRRELERRKKLHEYVEDLKGKIRVYVRVRPMSESEEGKGCGSAYTKNNATSVTYLQPDKAPPEDKKNFDFDKIFAGTPDMGNGQHQVFEDVKQLVLSCIEGTNVCIFAYGQTGSGKTFTMVGPGGAIGSNIDSSTGQPLDAAGVTPRAAVELFNVLQERDALCTAEVDVSMYELYCDALVDLLKEPSRPGQKEPDLKVKLAQHTESGLVEVQNGTICRASTLQELTDILEAGVRNRSTQSTKMNAESSRSHLVMSFVIRSTNRRSGVVTSGKLTLVDLAGSERVDKSGAEGQRLKEAQSINKSLSAIGDVVGALTSGTKHIPYRNHTLTTLMSDSIGGSAKTVMMVCCSPADYNAVESVNALSFAVRCKNVKNMTAANPAAAAA----QVQSLRQELARLKKAKGAADEGPKK 565          
BLAST of mRNA_P-littoralis_Contig164.34.1 vs. uniprot
Match: B8CD61_THAPS (Kinesin motor protein-like protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CD61_THAPS)

HSP 1 Score: 363 bits (932), Expect = 1.890e-111
Identity = 204/368 (55.43%), Postives = 259/368 (70.38%), Query Frame = 1
Query: 2587 ESERRKKLHNKMEDLKGKIRVYVRVRPFSTKEKARGCTEAVTGQGTTT-IAVQDPRVKEE-KTFDFDQVWSGTEEQGNNQVNIFKDTGYLVTSTVDGYNVCIFAYGQTGSGKTYTMFGAGGIGGGIDATAGVCDGTAGVTPRAVLELFRVLKEREGQYEYSVKVSMFELYRDGLRDLLAKK--GSHTKLVIKLAEHSGTGLVVVEGGVERDANDIKTMIDVIQVGAEGRTVSSTQMNSDSSRSHLLCSIVVTSTNRRTGSSLRGKLTLVDLAGSERVGKSGASGDQLKEAQSINKSLSALGDVIGALTTGVK-HIPYRNHALTMMMSDSLGGNSKTLMFVCASPADYNASETINALQFAARCKSVTNS 3675
            E+E+RK LHN +ED+KG+IRVYVR+RP S  E        +T +   T +   DP    E K ++FD++++G+E  GN Q  +FKDT  L+ S +DG+NVCIFAYGQTGSGKTYTMFG+       D +    +   G+ PR   ELF  L+ERE  +   V V+M ELY D L DLL  K  G  + L I+LAEH+ +GLV VEG     A +   ++D+   GA+GR  SST+MN+DSSRSH++ ++V++  NRRTG  + GKLTL DLAGSERV KSGA+G QLKEAQSINKSLSALGDVIGALT+G + HIPYRNH LTM+MSDS+GGN+KTLMFVC SPADYN  ET N+L FA RC++VTN+
Sbjct:    3 ETEKRKILHNTLEDMKGRIRVYVRIRPLSETELKADYANVMTKEDERTCVMASDPVSGSEIKDWEFDKIFNGSEADGNTQEAVFKDTSLLIISAIDGFNVCIFAYGQTGSGKTYTMFGSN------DRS----ERHQGLAPRVAHELFNKLQERESSHHIEVSVTMLELYTDKLGDLLTSKEEGYASDLKIRLAEHTSSGLVEVEGAKMERATNANELLDIFNRGAKGRASSSTKMNADSSRSHMIATVVLSLRNRRTGKVIHGKLTLTDLAGSERVAKSGAAGHQLKEAQSINKSLSALGDVIGALTSGGRQHIPYRNHPLTMLMSDSIGGNAKTLMFVCCSPADYNRKETANSLDFAKRCRNVTNN 360          
BLAST of mRNA_P-littoralis_Contig164.34.1 vs. uniprot
Match: K0SZ09_THAOC (Kinesin motor domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SZ09_THAOC)

HSP 1 Score: 381 bits (978), Expect = 1.490e-108
Identity = 217/452 (48.01%), Postives = 286/452 (63.27%), Query Frame = 1
Query: 2491 DVSAQREKMRRELEKAELTAKWNTLLQGLVLSESERRKKLHNKMEDLKGKIRVYVRVRPFSTKEKARGCTEAVTGQGTTTI--AVQDPRVKEEKTFDFDQVWSGTEEQGNNQVNIFKDTGYLVTSTVDGYNVCIFAYGQTGSGKTYTMFGAGGIGGGIDATAGVCDGTAGVTPRAVLELFRVLKEREGQYEYSVKVSMFELYRDGLRDLLAKKGSHTKLVIKLAEHSGTGLVVVEGGVERDANDIKTMIDVIQVGAEGRTVSSTQMNSDSSRSHLLCSIVVTSTNRRTGSSLRGKLTLVDLAGSERVGKSGASGDQLKEAQSINKSLSALGDVIGALTTGVKHIPYRNHALTMMMSDSLGGNSKTLMFVCASPADYNASETIN-----------ALQFAARCKSVTNSAGPGXXXXXXXXQVQALRRELQKLKGGDGGGNEAAKKPTQLARP 3807
            +V A+ ++M+  + KA+   K N  L   +  E+E+RK LHN +EDLKG+IRVYVR+RP S  E      E ++ +   T+  A  +   +  + ++FD+++SG    GN Q  +FKDT  L+TS +DG+NVCIFAYGQTGSGKT+TM G                   G+ PR   E+F  L+ R   ++  V  SM ELY D LRDLL  K   + L I+LAEH+ +GLV V+G +       + +++V   G++GR  SST+MN++SSRSHL+ +IV+T  N+RTG ++RGKLTLVDLAGSERV KSGA+G QLKEAQSINKSLSALGDVIGALT+   HIPYRNH LTM+MSDS+GGNSKTL+ VC SPADYN  E+ N           +L FA RC++VTN A  G        Q+ ALR EL KLK    G     ++  +L RP
Sbjct:  805 EVEARLKEMKDFISKADELEKTNEQLHVSLSQETEKRKVLHNTLEDLKGRIRVYVRIRPLSESELNANFVECLSKEDDRTVVMAADEATAQGTRDWEFDKIFSGNNAAGNTQEAVFKDTSLLITSVMDGFNVCIFAYGQTGSGKTFTMLGG-------------SHENQGIMPRTANEIFNKLQSRASSHQIEVSASMLELYTDKLRDLLVAKDDPSDLKIRLAEHTESGLVEVDGALVEHIGSAEELLEVFDRGSKGRASSSTKMNAESSRSHLIVTIVITLQNKRTGKAIRGKLTLVDLAGSERVSKSGATGHQLKEAQSINKSLSALGDVIGALTSQKSHIPYRNHPLTMLMSDSIGGNSKTLLLVCCSPADYNRRESTNRCTIVLNHATLSLDFAKRCRNVTNKATKGGSNESSSAQIMALRAELSKLKKSKEGSTGMVRRGPRLRRP 1243          
BLAST of mRNA_P-littoralis_Contig164.34.1 vs. uniprot
Match: A0A8J2SWW4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SWW4_9STRA)

HSP 1 Score: 362 bits (929), Expect = 2.630e-103
Identity = 217/436 (49.77%), Postives = 287/436 (65.83%), Query Frame = 1
Query: 2515 MRRELEKAELTAKWNTLLQGLVLSESERRKKLHNKMEDLKGKIRVYVRVRPFSTKEKARG--CTEAVTGQGTTTIAVQDPRVK---EEKTFDFDQVWSGTEEQGNNQVNIFKDTGYLVTSTVDGYNVCIFAYGQTGSGKTYTMFGAGG-IGGGIDATAGVCDGTAGVTPRAVLELFRVLKEREGQYEYSVKVSMFELYRDGLRDLLAKKGSHTKLVIKLAEHSGTGLVVVEGGVERDANDIKTMIDVIQVGAEGRTVSSTQMNSDSSRSHLLCSIVVTSTNRRTGSSLRGKLTLVDLAGSERVGKSGASGDQLKEAQSINKSLSALGDVIGALTTGVKHIPYRNHALTMMMSDSLGGNSKTLMFVCASPADYNASETINALQFAARCKSVTNSAGPGXXXXXXXXQVQALRRELQKLKGGDGGGNEAAKKPTQLAR 3804
            +   + +A+   + N  L   ++ E +RRK LHN +EDLKG+IRVY+RVRP + KEK     C E     G T + V+ P  K   + + F+FD+V++G   Q      +F D   LV S VDG+NVCIFAYGQ+GSGKTYTM G GG +   +D  +     +AGV PR+ +E+FRVL ER     Y V++SM+ELYRD LRDLLA +     L +KLA+H+  GL  VEGGV R A  ++ ++ ++  G E R V+ T++N++SSRSHLL SIV+TSTNRR+G   RGKL LVDLAGSERV KSG  GD+LKEA SINKSLSA+GDVI AL+   KH+PYRNH LTM+MSDS+GG +KTLM V ASP+  +ASET N+L F +RCK V +S+G          Q++ LR+EL ++K    G   A +K  +L R
Sbjct:  608 LEEHIARADAVDRRNAQLDRDLVREVKRRKDLHNALEDLKGRIRVYLRVRPMNEKEKTAHEVCCER---SGQTGVVVKRPDRKPPQDRQHFEFDRVFAGEAAQDA----VFADVKALVLSCVDGFNVCIFAYGQSGSGKTYTMAGGGGPVRDAVDLESWAVAASAGVIPRSCVEIFRVLDERAALNSYEVELSMYELYRDALRDLLADRKDKKPLSVKLAQHTRDGLAAVEGGVCRQAKSLEELVALLDKGLEQRAVAHTELNAESSRSHLLVSIVLTSTNRRSGKKTRGKLMLVDLAGSERVEKSGVQGDELKEAASINKSLSAIGDVIAALSQKSKHVPYRNHPLTMLMSDSIGGTAKTLMIVNASPSSEHASETANSLTFGSRCKRVKSSSG-----GEMAAQLKDLRKELDRMKAT--GAARAFRKGAELPR 1029          
BLAST of mRNA_P-littoralis_Contig164.34.1 vs. uniprot
Match: A0A7S3HTV9_9STRA (Kinesin-like protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HTV9_9STRA)

HSP 1 Score: 317 bits (813), Expect = 2.550e-94
Identity = 190/343 (55.39%), Postives = 234/343 (68.22%), Query Frame = 1
Query: 2770 FDFDQVWSGTEEQGNNQVNIFKDTGYLVTSTVDGYNVCIFAYGQTGSGKTYTMFGAGGIGGGIDATAGVCDGTAGVTPRAVLELFRVLKEREGQYEYSVKVSMFELYRDGLRDLLA-----KKGSHTK-------LVIKLAEHSGTGLVVVEGGVERDANDIKTMIDVIQVGAEGRTVSSTQMNSDSSRSHLLCSIVVTSTNRRTGSSLRGKLTLVDLAGSERVGKSGASGDQLKEAQSINKSLSALGDVIGALTTGVKHIPYRNHALTMMMSDSLGGNSKTLMFVCASPADYNASETINALQFAARCKSVTNS--AGPGXXXXXXXXQVQALRRELQKLKGG 3756
            +++D+V+     Q + Q  +F+    L  S +DGYNVCIFAYGQTG+GK++TM GA  I   +    G  D  AG+TPRAV ELFR+L ER  Q ++ V+V MF+LYRDGL DLL      KKG           L I LAEHS TGLV VEG     A     ++ +   G+  RT +STQMN++SSRSHL+CS+VV  TN+R+G    GKLTLVDLAGSERV KSGA+G+ LKEAQSINKSLSALGDVI ALTT  +H+PYRNH LTM+MSDS+GGN+KTLMFV  SPADYN  E+ ++L FA RCK +TN+  AGPG        QV AL++EL KLK G
Sbjct:   33 YEYDRVFP----QHSTQEEVFEAVQPLCVSVLDGYNVCIFAYGQTGAGKSFTMIGAADIANCMSEN-GDFDDLAGITPRAVSELFRLLNERTAQIDFVVEVQMFQLYRDGLDDLLKEPIKRKKGXXXXXXXXXXXLKITLAEHSPTGLVYVEGAQTLAATTPGDVMKIFAKGSARRTTASTQMNAESSRSHLICSLVVKLTNKRSGKESIGKLTLVDLAGSERVDKSGAAGEVLKEAQSINKSLSALGDVISALTTNQQHVPYRNHPLTMLMSDSIGGNAKTLMFVNTSPADYNTPESNSSLAFANRCKDITNAVAAGPGVQAA----QVSALKKELAKLKKG 366          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig164.34.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMA5_ECTSI0.000e+079.39Kinesin motor domain-containing protein n=2 Tax=Ec... [more]
A0A835Z134_9STRA3.230e-18071.50Kinesin-like protein n=1 Tax=Tribonema minus TaxID... [more]
A0A7S3HTU3_9STRA1.070e-15435.08Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A812VNR0_SYMMI4.500e-13255.50Kinesin-like protein n=1 Tax=Symbiodinium microadr... [more]
A0A7S2K2T0_9STRA3.720e-13034.29Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2B390_9STRA6.810e-12352.52Kinesin-like protein n=1 Tax=Florenciella parvula ... [more]
B8CD61_THAPS1.890e-11155.43Kinesin motor protein-like protein (Fragment) n=1 ... [more]
K0SZ09_THAOC1.490e-10848.01Kinesin motor domain-containing protein n=1 Tax=Th... [more]
A0A8J2SWW4_9STRA2.630e-10349.77Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3HTV9_9STRA2.550e-9455.39Kinesin-like protein (Fragment) n=1 Tax=Spumella e... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig164contigP-littoralis_Contig164:190944..205155 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FMA5
PFAMsAnk_2,Ank_3,Ank_4,Ank_5,Bromodomain,Kinesin
Model size3813
Max annot lvl2759|Eukaryota
KEGG koko:K10406
Hectar predicted targeting categoryother localisation
Exons18
Evalue0.0
EggNOG OGsCOG0666@1|root,COG5059@1|root,KOG0239@2759|Eukaryota,KOG4412@2759|Eukaryota
Descriptionproteasome regulatory particle assembly
Cds size3813
COG categoryL
BRITEko00000,ko04812
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789792.4191604-CDS-P-littoralis_Contig164:190943..1913271680789792.4191604-CDS-P-littoralis_Contig164:190943..191327Pylaiella littoralis U1_48CDSP-littoralis_Contig164 190944..191327 +
1680789792.4326885-CDS-P-littoralis_Contig164:191708..1919831680789792.4326885-CDS-P-littoralis_Contig164:191708..191983Pylaiella littoralis U1_48CDSP-littoralis_Contig164 191709..191983 +
1680789792.4453506-CDS-P-littoralis_Contig164:192719..1929101680789792.4453506-CDS-P-littoralis_Contig164:192719..192910Pylaiella littoralis U1_48CDSP-littoralis_Contig164 192720..192910 +
1680789792.4552088-CDS-P-littoralis_Contig164:193713..1940121680789792.4552088-CDS-P-littoralis_Contig164:193713..194012Pylaiella littoralis U1_48CDSP-littoralis_Contig164 193714..194012 +
1680789792.466931-CDS-P-littoralis_Contig164:195369..1955401680789792.466931-CDS-P-littoralis_Contig164:195369..195540Pylaiella littoralis U1_48CDSP-littoralis_Contig164 195370..195540 +
1680789792.4807436-CDS-P-littoralis_Contig164:195783..1958851680789792.4807436-CDS-P-littoralis_Contig164:195783..195885Pylaiella littoralis U1_48CDSP-littoralis_Contig164 195784..195885 +
1680789792.4911969-CDS-P-littoralis_Contig164:196355..1967121680789792.4911969-CDS-P-littoralis_Contig164:196355..196712Pylaiella littoralis U1_48CDSP-littoralis_Contig164 196356..196712 +
1680789792.506053-CDS-P-littoralis_Contig164:196963..1970321680789792.506053-CDS-P-littoralis_Contig164:196963..197032Pylaiella littoralis U1_48CDSP-littoralis_Contig164 196964..197032 +
1680789792.5149689-CDS-P-littoralis_Contig164:197668..1978081680789792.5149689-CDS-P-littoralis_Contig164:197668..197808Pylaiella littoralis U1_48CDSP-littoralis_Contig164 197669..197808 +
1680789792.5250869-CDS-P-littoralis_Contig164:198071..1982281680789792.5250869-CDS-P-littoralis_Contig164:198071..198228Pylaiella littoralis U1_48CDSP-littoralis_Contig164 198072..198228 +
1680789792.5349476-CDS-P-littoralis_Contig164:198541..1986581680789792.5349476-CDS-P-littoralis_Contig164:198541..198658Pylaiella littoralis U1_48CDSP-littoralis_Contig164 198542..198658 +
1680789792.5510223-CDS-P-littoralis_Contig164:199448..1996221680789792.5510223-CDS-P-littoralis_Contig164:199448..199622Pylaiella littoralis U1_48CDSP-littoralis_Contig164 199449..199622 +
1680789792.5604837-CDS-P-littoralis_Contig164:201223..2013941680789792.5604837-CDS-P-littoralis_Contig164:201223..201394Pylaiella littoralis U1_48CDSP-littoralis_Contig164 201224..201394 +
1680789792.569181-CDS-P-littoralis_Contig164:201753..2019301680789792.569181-CDS-P-littoralis_Contig164:201753..201930Pylaiella littoralis U1_48CDSP-littoralis_Contig164 201754..201930 +
1680789792.577723-CDS-P-littoralis_Contig164:202383..2025001680789792.577723-CDS-P-littoralis_Contig164:202383..202500Pylaiella littoralis U1_48CDSP-littoralis_Contig164 202384..202500 +
1680789792.5861747-CDS-P-littoralis_Contig164:203205..2034151680789792.5861747-CDS-P-littoralis_Contig164:203205..203415Pylaiella littoralis U1_48CDSP-littoralis_Contig164 203206..203415 +
1680789792.6000922-CDS-P-littoralis_Contig164:203948..2040801680789792.6000922-CDS-P-littoralis_Contig164:203948..204080Pylaiella littoralis U1_48CDSP-littoralis_Contig164 203949..204080 +
1680789792.6106315-CDS-P-littoralis_Contig164:204585..2051551680789792.6106315-CDS-P-littoralis_Contig164:204585..205155Pylaiella littoralis U1_48CDSP-littoralis_Contig164 204586..205155 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig164.34.1prot_P-littoralis_Contig164.34.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig164 190944..205155 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig164.34.1

>prot_P-littoralis_Contig164.34.1 ID=prot_P-littoralis_Contig164.34.1|Name=mRNA_P-littoralis_Contig164.34.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1271bp
MANPEGGNGGKTSTAAETKKRESGGGGGGGGSTRRKRSHPNTEGGEINNN
NDNNTGTGGESNGHDRKHQHHQHRRHRHRHRHGPKSTSGTNDNNTASDTD
GAQDEDKLKLLIEFIPYVGLGDAARDNMVRSILCAADAEELVGTDDYGNT
LLILACQYRRKALVPLILARSGGAIDLDAVNSEGACALHFACYKDSICVE
TAFLLLERGAKPEVVENTHGCTPLHYAAGAGDVDLCKRLIEKGARVNTWD
FYQFTAVDYAKQSGATVCVAYLEEVSTPGATTAATVKSSPGRGGLVTISG
VEVPSGLLRDDSFDTVDDDFRPRGRAAKATVGGGGENAAALGRQPSSGSD
NFSVGGEDSGGGEGYWGRQGDPESGLAYYLNEKTGESMWEKDLLVQAQAL
HDDLNEEEPSPQLAQWLRQQTQRARLVAFLGRHDPLKIMQADDMLKRRLG
DEEALFAELVKQYSAEEEPDFAALVEGAARGFRDHKIASPAPAATASDAS
IAATSRPSSPTTAPGATAKEEALETLTATLNRGVSVAAAVGSTKPGGGGG
GGGGGGRPPTAPAQRPGLRTGARTSTAMLRMTRSAKDLLGTSSLIPTAPA
QLSPEDLKNLQEQAQKRLDDAKAAHEERLEAERKLHRDKAAEGEGAIARM
EHDLKEASAEEERLRAKIEEQKQLAASLEGQLQEKLASQSGKVKALSEEA
AALRSELKAAVEETQALSDVVDREQSGAASAAESSRRDMETKAKEESDLV
HECQASVAAAKSDAERARREFAARRQVEQQNILDRLRGQLSLLQKELAAA
KSKAAVDISRAQSDAAAATSKAKATTALVVDVSAQREKMRRELEKAELTA
KWNTLLQGLVLSESERRKKLHNKMEDLKGKIRVYVRVRPFSTKEKARGCT
EAVTGQGTTTIAVQDPRVKEEKTFDFDQVWSGTEEQGNNQVNIFKDTGYL
VTSTVDGYNVCIFAYGQTGSGKTYTMFGAGGIGGGIDATAGVCDGTAGVT
PRAVLELFRVLKEREGQYEYSVKVSMFELYRDGLRDLLAKKGSHTKLVIK
LAEHSGTGLVVVEGGVERDANDIKTMIDVIQVGAEGRTVSSTQMNSDSSR
SHLLCSIVVTSTNRRTGSSLRGKLTLVDLAGSERVGKSGASGDQLKEAQS
INKSLSALGDVIGALTTGVKHIPYRNHALTMMMSDSLGGNSKTLMFVCAS
PADYNASETINALQFAARCKSVTNSAGPGGGGAAAAAQVQALRRELQKLK
GGDGGGNEAAKKPTQLARPS*
back to top

mRNA from alignment at P-littoralis_Contig164:190944..205155+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig164.34.1 ID=mRNA_P-littoralis_Contig164.34.1|Name=mRNA_P-littoralis_Contig164.34.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=14212bp|location=Sequence derived from alignment at P-littoralis_Contig164:190944..205155+ (Pylaiella littoralis U1_48)
ATGGCAAACCCAGAGGGCGGCAACGGGGGTAAGACGAGCACGGCCGCCGA GACGAAAAAGAGAGAGAGCGGCGGCGGCGGCGGCGGCGGCGGTAGCACCA GGAGGAAACGCTCACACCCGAATACCGAAGGCGGTGAAATCAATAACAAC AACGACAACAACACCGGCACCGGTGGAGAGAGCAATGGCCACGATAGAAA GCACCAGCATCATCAACACCGACGCCACCGACACCGGCACCGGCATGGAC CCAAGTCTACAAGTGGGACCAACGACAACAACACAGCCTCAGACACAGAT GGAGCGCAAGATGAGGACAAGCTTAAGTTACTGATAGAGTTCATCCCCTA TGTCGGACTCGGCGACGCTGCGCGCGACAACATGGTACGCGCGACCGACA GCATAACTATACATGTGTGGTATCTGTCGATCACGCACCGGCAGCCAAAA ATTATTTAATACAGTACTCGTCTGGGACGTCACACGTTGAAGAGAGGAAT GACTTGGCTAAAAAACAATGCTCGTACTATTATGATTGAACCTCTGCTCT AAATTTGCAGGCAGGCGATGTATGCGTGCAATTATTTGGGTCGTTAGACG TTGTCAACACAGCCTTTAATGGGAAATGCAAGGATGGGTGGGGCTATGAC GGGAAGCTCCTTGGGAGGCCTACTACGGGAAGCTACTCTCAACTCTGCTG TATCTACCGTGCCCAAATTGTCGATCCGACTGCTTCATATCCACATTAAC CTACTCGAAACAAAGGTGCGCTCTATTCTCTGCGCCGCTGACGCCGAAGA GCTCGTCGGGACAGACGACTATGGCAACACCCTCCTCATCCTCGCATGCC AGTACCGGCGCAAGGCCCTCGTCCCACTTATCCTGGCAAGAAGCGGCGGT GCCATAGACTTAGACGCGGTGAATTCAGAGGGGGCCTGCGCGTTGCACTT CGCGTGCTACAAGGATAGCATCTGCGTGGAGACAGCTTTTCTTCTGCTTG AGCGCGGGGCCAAGCCTGAAGTCGTCGAAAATACTCACGGGTGAGCTCCT TTGTGCACTCTGAATTTTCACCTCTGAGAGAACGAGTAGGAAGACAACGA AGAGAAAGAAAAGTAACAGGAACAATAACGCTAGCCGGCGGGAATTTTCT TAAGCTTGATACAAGCAGTGCGGGTTCAAAGCCTGGTTAGCGAGGTTTCA TACCATAGGACATAGCAAAACGCACCTTCTTCTAGAACAGTCCTTCGGCG ACCCGCTGTATTTCGCATGATCAAGTGCCTCTCTTGGGTCTGTGCATTAC AGAAGAACGACGCGGGGGTGACTTATTCTGCTTGTACTCGGACGACAGTC AAGCCAAGGAAAGTAGACAATACCTGGGGTACAGGCTGCTTCATGAGGCA GGTAGAGATGCAACATACGAACGAAAATATACGATGTTCCTCGCCCTTGG TCCAACGATGGAAGAGTGCGGTCGAAGAGTTGCGGGTGATATCACTCCAC ATTATTTCGTCCGTTGGTAGTCCGCGACCTGTGCCGGCAGTGGAGAGGTA AGGAAAGTTTGTCGCCTAGTCGCCCGACCTTTCGATACAGCATATCCGTG CATGAGCGTATTCCGCCACTCTCAGTGTACTGCTGTACGTGGTGTGTTGT GCCTTCGAGGTGTGCGATATAGTGCGCACCCTGCTGCTTGTCGTCTTTCG TCTCCGGCCTCACTACAGCAAGTAAGTTCCTTCCCTGTGTGTGATATTGC GCTGTCAAAACCCGGTATGCAACAAGGTGCACGCCGCTACACTACGCGGC GGGGGCAGGAGACGTCGACCTGTGCAAGCGGCTGATAGAGAAGGGGGCCA GGGTGAACACGTGGGACTTTTACCAGTTCACAGCCGTCGACTACGCCAAG CAGTCCGGAGCGACGGTCTGCGTGGCTTACCTAGAGGAAGTTTCGACACC GGGAGCTACCACCGCCGGTAATTACCACCACATACCACCCATTCATAGCT TTTGTGTCACATTCTGTCGTCGTAAGTAGCGTGTGCCAGTGTCTCACGCT TTCTGTAGTAACGGCCATCGTACCACTGCGTGGGTTTCTATGGGAAATCT CGCTCCTCCAAAGCAATATACCGCCGCATGCATGACGCGTGTTTATTCAG CCCAGGTGCGTTTGATCGTCTTATCGTTGATTACCGCAGAATGTATAATC TGAGGTACAACTGGAGGGAGGTTCGGCACCCCGAGCTTCCACCTCTGGTG AAAACGTCTTATCCGCTTCGCCTTTTAACTTGTTGTTGTTGTTGTTGTTG TTGTTGTTGTTGTTGTCGTCGTCGTTGTCGTCGTCGTCGTCTTGTGTCAT TCTGTGAGAGATGCGTTGTTACGCCAGGCTTGCACAATTTCGATCGTGAA CCCAACGAAAGTAAGGGGAATATTTCTACGCTAGAGTGTCAGCAACCCTG ACCTTCAGAACGGCACACTGCGCACTGGTGTGGCTTAGAGACCGCGTGCT TCTAGGGTATATATGCCGTGCGTGCAGCGTTTCGGGTCGCGACACGGTGG ACTGAACGACAGGTTCTACATCTATCGCTGTTGCCACCACAGCCGCCACA GCGTACTCGCCTCTCTTGACGCAAGGGCACCAGTTTTCTTCACTGTGCTA TGTAGCATTCTCTAATCATTGCTTATATACACCTCGAAGCTGGCGTGCAA AGAGCTCGTAGATTGTGATCCCACCGTGTCTGCCTATTCTCGTGTCCTTT CGAACTTTTAAACCAATCAGCGACGGTCAAGTCTTCTCCCGGGCGAGGCG GTCTCGTCACAATTTCGGGCGTGGAGGTCCCGTCCGGGCTCCTCCGTGAC GATAGCTTCGACACCGTGGATGACGATTTTCGCCCGCGAGGGCGGGCAGC AAAGGCGACCGTTGGTGGTGGTGGAGAAAATGCAGCAGCGTTGGGGCGGC AGCCAAGCAGCGGGAGTGATAACTTTAGCGTTGGTGGGGAGGACAGCGGG GGCGGTGAGGGGTATTGGGGCCGACAGGGCGACCCGGAGTCCGGTTTGGC TTATTACCTCAACGAAAAGGTGGGCGTGTGTGCGTATTTCAAAAGACGTT TGATTTTCGATGCCACCTTTTTAACGATCGTGGGAACCGCCGCTTTCCCC CAACGACTCTTCCCATTCCACGGAGCGTGGAAAATCCACATCGTTAAAAA TAAATCGTGAAGAACCGTTCTTCCCATCCACACAAAAAATTCCCAGATTT TTATCGAAGACACCCCCCACCCACACGCAGCTGGAGCAGCAGCAGTGTAG ACGTGAGCGGACTCAACAGAGCACGCGATGTCAACACTCTGGCAAGCAAT CCAATCCTGTAACTCAGCTTTTGAGCGAACGTGGCCAGACGTTGGCGAAG AGAGTGCGAATACGAGTCAGGAATTGCAGAAGAAGCCCGTTTTGCGCCCC TTTTATCCGCATTTTTCCCGCCCTCACCAACACCCTCCCTTCTCGCGACC CTTCTCTAGCCAGCACACCAGCTGTGACCACCGCGTAGAGGTCGCGGTGC CGAGAGCCAGCATCATGTTTGCCTCCATTTGAAACAATCAGCACTTGGGA GGCCTTCAAGCTCTGTTTCTGTAGGATGTCGTGAAGCGCATCATAGGTCG AGATTTTACAACAACACCTGTCGGCATTTTGAATCAATCTTGTCCAACAC ACTCTCTTTTTGCAACCCTCCTCTAACCAGTACGCGAGGTGCAACAACCG CGTGTGTAAAGGCAGCGGCGTTGAGGGCCGAAAACGTTTAGATCGCCGTT CCAAAAAAATCGGGACTCGGGAAGCCTTCAAGCTCTGCCGCTGTTTGATG GCGTGAAAGGGAGTTCGTCGAGTTTTCCCACGTTTGAGAAATACGCAATA TGAATGCCCTACCTTTGATGAGAAACGGGACTCTTTTCCTCTTCTAAAGA TGGATTAAAAATTCCTCTTCTTGTCTAAAAACTGGCTTCGATAATAAAGG ATTTTCTTTATTGTGTACAAGTATACTGACAAGGCGCCGGTCGTTCGTCT TCGGCCACCCCTTGTCCTTGCGATTCCTCGCGACGAAAGTTGTTTCGGTT GATTTTACGGCTATGTCGAGGACGGAAAAGACGGAGGGGAGACGATGCGA TCGTCCCCACGTCTTTTGTTTGCGAACCCGACATGGGCACCTTCAGGCTG TGAAGAGCATGCGGCAGAAATCCTTGCTTCAGAACTAAACATATGCTTTA CTGCTTCGAAGATTTGTGGAAAACCCACTGTTCGGAGCTCTCAAAGCGTG GGGAGCACATTGGATACGCCCGCGTCGGTTCTTCAAACCTCATCAAAACT CGACAAGCATTTTTGGGTAATGAGAGAGCCCACCAAGTCGTGACGAAAAC CAAACTGCCTGTTGTTGTTCGGACAGACCGGCGAGAGCATGTGGGAGAAG GACCTGCTGGTGCAGGCGCAGGCTCTCCACGATGATCTCAACGAGGAGGA GCCCTCGCCGCAACTGGCGCAGTGGTTGAGGCAGCAGACGCAACGGGCGC GCCTAGTCGCCTTCCTTGGGCGGCACGACCCTCTCAAAATCATGCAGGTT TCTGCTCTGGCTGTTTGTTGCCAATGTACGTAGTGTCTCCATGGATTGGC GAGGCAAGTCCTTGGACACCTTGATCACAATCTTTCGCTGGGAGAGTTTC TCCGCAGACGGGCGGTCTACTACTTTACTCAAAAACACCTTCCCCCCCCC CCCCTGAATTATTTAGTAGGCGTTATTGAGCAGATGTGTGGCATGGTTTC CCCCGCCGCCTTACGTTTCATTTCGCTGTTTTTTTCGAAGGCGGATGACA TGCTCAAGCGTCGACTTGGTGACGAAGAGGCTCTTTTTGCCGAGCTGGTC AAGCAGTACTCCGCGGAGGAGGAGCCCGACTTTGCCGCCCTGGTGAGGAA GTTAGAAAATTGTGTCCGTGATTTCTATGGGTGTCTCAAGCTTTGATGCG TGAGACATGCTCCGAAGTACGGTATTGGTTTGCATATATTAATTTACGAT GCGTATCTGTAAACTGCACGATTATACTGAAAACGCTCGGTACACTATGC TGGGGAGAAAGGCAGACCGTCTGTATTTCATTGCTCGCCATTTAAATTAT AGGAAAGTCACGCCACTTTCGGTGAGATCGGGTGAAACGCGTGGTGTTCC TAAGTGCACACTTTACTCGCACTTTTTGCGGCGGAACAATTACCCACCCC ACGATTTACTCGTTGGACGGGCGAACTCACCCAGTTCATATTTTTCTTCC ACGTTGTTGTTGAAACGCCGAGTTCTGAAATATTGTCGGAAAATCATTCA AGGGGGCTCGCACGACCTCAGCATCGGCATAATACCCCCTCTTCGGCACA TGTTTTCCAAAGGTCGAGGGAGCGGCGCGGGGATTCCGTGACCACAAAAT CGCCTCCCCTGCTCCCGCTGCAACAGCCTCTGATGCCAGCATCGCTGCCA CAAGTCGACCGTCGTCACCAACTACAGCCCCCGGAGCCACCGCAAAGGAG GAAGCCTTAGAAACGTTGACGGCAACGTTAAATCGAGGGGTTTCTGTGGC TGCCGCGGTGGGGTCGACCAAGCCGGGCGGGGGCGGCGGGGGCGGTGGCG GTGGCGGGAGGCCGCCGACCGCCCCGGCACAAAGACCGGGGTTGCGGACC GGAGCACGGACGTCGACGGCGATGCTGCGGATGACGCGGAGCGCCAAGGA TCTCCTGGGAACCTCGAGCGTGGGCAAGGCAAGGCCGAAAAAAAAATATA TATATATACCCCAGGACTCCGATAAAATTAAAGAACCGCCTTAAACTGTG GGCATGACAGACCCAAAAAAGGAGCCGTGAGTCCATATTTTTTAATTAGT AGTGAGGCGACCTGGTGTAGTTGGGCGTTGTGAAACCTTTCCCTCCGCAG ATTAACTCTTCGAACCTTAACCCCCCCCCCTGCGTTCGCCGGATGGATGC GCTGGAATTTGTTTTCGCAGCTGATCCCTACGGCGCCGGCCCAGCTATCG CCTGAAGATCTGAAGAACCTACAGGAGCAAGCTCAAAAGGTTTCCCTCCC GCGAAGTCTAGCGACGTAGTCCAGAGCACTTGTGCGGATTTGTCGCCATG TGCAAACATGTACTCGGTGTGAAAAGCACACCTGACCACACTGGTTCCAG GCACGGCGAAGTATCATTGCTTCTCAACCAGGGTACCTTGTGGTCCTGCT TCACAAAAGTGGGGCGGTAATGAACTCCCTCGACCTGCACTTTACGATAT ATTTCTCCAGGAGGAGCTGTTTCCATCGTCACCGACCTTTTCAGCATTAG ATGGTGCTCCTTCTTGCTAGAGTACCCAACTTGAACGGCATGAGGGAGAA TGCTGTGCTCAACCCAGTGCACGCCGCTTTTTTCGCTTATATACCTGTCG AATGGTTGCACACACCCTACCTGCCTACGCCGCCGCGTGCACCTTCGACG GAGAACGAACAGTTTCAATGAAATCGTATCGAGATTTCTCAGTCCAATCA AATAGAATGTGCAAGCCAGACTTTAATGAGATCGGCTACGGTCCGAAGGC ATGCTAAATCCCTGTGCCCCTTCGAGTGCATCTATTCGCACGGTCCCCCC CCCATGGTACTGAATGTGGAAATCACCGAATGGTTGCGAAAAAACTTGCG TCTTATTTCGTTTACCAACAACCAGCGGCTTGACGACGCCAAAGCCGCTC ACGAAGAAAGGCTAGAGGCGGAGCGCAAGCTGCACAGAGACAAGGCGGCG GAGGGGGAAGGGGCCATCGCGAGGATGGAACACGATCTAAAGGAGGCGTC CGCCGAGGAGGAGAGGTAAAAAAGCGAAACCCGGAAAAACATATCACACA AGATGCACGAAATTAAAGACGACATGATACATACTTGCTCCCGGACATTC TGGTTGAGTTTTATGATGGAAAGCGCCTCGTCTCATCGCCACCCTTCTTC TGCCGAGCAGATCGGGAACCAGACGGCCAAGTAACGCCAGTCTTTGAAAA AATTCACATACAAACACGTTTCTTATACACTGCAGGGTACCCAAACCGTG CTGGGTTGTTTTCTGATCGCGCGCGCAGGTTGCGAGCTAAAATAGAGGAG CAGAAACAGCTGGCGGCTTCCCTGGAGGGCCAGCTGCAAGAGAAGTTGGC GAGCCAATCAGGGAAAGTGAAGGCTCTATCGGAGGAGGCGGCGGCCCTGA GGAGTGAGCTTAAGGCCGCTGTCGAGGAAACGCAGGTAAGAACATTAATG TCCGTGTCATTTTTGCGATTGTGATGGATGGGGCTTTGACGGTTTTGCTT TTATTCCTGGGGTTGTTCTCGCCGTTTCTTTTTGTGTGGGCGTTGTACGC GTCGTACCCGTTGGGAACCGTTATCTCCTTGTTGCGCCGAGTGTAGAGTA TGCGCCATGCGCTCCTGTTTTGCTGTGTGTGCTATTTTGCGAGTTGTGAC CATGCAAAATAAAAACGGCAGCGCATATCATGACAGTACGCAAACACTTT TTGTTGTTGTGAAAATGGGAGAGCACGCTGTCCTCGCATTGCATCTAGGC TCTCTCTGACGTGGTGGATAGGGAGCAGTCTGGGGCGGCGTCTGCGGCGG AATCGAGCCGTCGAGACATGGAGACAAAGGCCAAGGAGGAATCCGACCTT GTGCATGAATGTCAGGTAAACAGACGTACCGGTCCTGTGGCAAACTAGCC ATCCCTACCCCAACCACAACCCTTGCCCGGAAATTTGAACACAGTATGAT GTTTGCAGGAGATAACCTTTGTTTGAAGGTATTTCACATCGTTGAGGTTA TAATATGCCAACGATCGTTCAAACCTCGCGCGCGCACGTGCCGGGTGTAA AAGTTAACCGAACGTTATGCGGATCTTTGGCTGTAAAAAGATGCCATCAT AAAACATGGATCACCGGGGCTAGTTCTGCTCTGCTCAGGACGGCTGCGGG AGGGTTGTCGCGTGAATTCCGATTCTAGTCGGAAAAAGGCGACAACCGCA AGTTCCTACCATTGCACTGTGGACGACACCTGTCGTGGGCAATACCTTAT GTCACGTTTATCGTTCCTCCAAGGCTGGCCATAGTCGTTGGCCCAGAGTG ATGTTGGGCATGCAGTGTCACGCTAACTTCTATAAAGGCCCGTTTTGACT GCAGCGTGCTGGTGTTTCTCCTAAATCTGAGCCTCTTTCTTCCAAGACCG ACGCCTTAGCTCTATGAGGTACAACGAAATGACCTCGCAACAAAGTTCGG GTGTCGGCAGGTGTCGGCGCCGTAGAGATATTGATGTATACATGTATGGA GAAAAACGTTTTCAGGAATAGTTCGGACGTTTCCACACGGTCGTTGTTTC ATTATTTATTTTTTCGAGCGGACGGAACGATATTTGCTGTACCTATTCCC ACGCTCAGTGCTGCTGTAAACACTGCCCGTCCTGTCTTGTATGTGCTCTC CCTAGGCGTCGGTGGCGGCGGCGAAAAGCGACGCGGAGCGTGCGCGGCGA GAGTTCGCGGCCCGTCGCCAAGTGGAGCAGCAAAACATCTTGGACAGGCT GCGCGGGCAGCTGTCCCTGCTCCAGAAAGAGCTCGCCGCGGCAAAGTCAA AGGCGGCGGTGGACATCAGCCGAGCACAGGTGCGAAAACTGAAAAATGGC GAGAACAAAAACACGGCTGCTGTGAGCCCGCGGGCCCTGGATTTGTTCAG CAGGCCGAGAGCTTCGTCATCCTAAACAATGCCAAAACGCCCACCACCGC AACCTACTTGTACATCATCTATTTTCACGCAGCTGATGATGTGAAAGTGA TCGAAATCGAAGTGCCTACCAAACTTCGAACCAGCTATGTTCCCGATGAC CAAGTGTGGAAACCCACTGCCGGAGCTTTTCAACATCGAGTCGAAGCGTT CGATGACAGCAGTGAAGAACGTTTTAAGCTTTATTTTTTTGTTTCGATGC TTTGTTCAATAATCGAGGTAAGTGTCAGACTGGTCGACAGGGGAAAGGAG TAAACACACACGGAATGTTATCGATTTTACGGCGTATGAGCATCCCAAAC TCACTTCGAAGACGCTGGATACGGAGCCAGGTTGATGTGTTCATGCGGTG TTTGTTTGTTGACTCAACGTGTCATTTTCCCGCAGTGCAATGCTATACTA GACCAAAACGAAGTTGGTGCACGGCGTGTGGACTCAGCAAGCGATGCGCG CGCGCAAGGTAAAGAAGAACCGTCGTAGATGTGTTTGACCCCAAAACTTC GAAAGGAAACGCGCATGGATACATGCGTGCTAACATACGAAGACTACAAG GCATACAAGGTGGTGGCGAGGAAATGCCGCCCCAAGAGGGGGACTCTCAC AGTCATGTTCATTTGACACAAAGGGGAACGCTCAGCCCTCGAGTTCTTCC CTGACTTAAGCACGTCGAAAACGAACGCAGGCCGAGTTCCTTTCACCTTT TATTGTGTTGTTCGACCGATCGACTTCAACAAGTAGATGCACCACCGAAC AGGTTATATTCAACGCTGAAAAAGCCCGAGCTCTAGATGTTTATTGGTGC ATGTTTTGTCATCAACCGAGCGAGGTCAAAGAAGAACCCATATACGTTTT ATTATCAACATGTTGATGGACACGAACTGTTCTTCATCAAAACCTCGCCT TTTAATGTCGTCTAGCTAGGTATCTCGCGAACGACTCCAAATCCTCAGAT AGATGCTCGGTCTTCGAAAACAGTTGTGTAGCTCTCGAACGGATGGTCTG TGGACCCCCCCATTGTTTTGACGGTGTCGAGGTTCTTTCTTTTTTTCCTG CGGAGCAAGATCGACACAACTGTCTTGAAATGTCAGACGAAAAACATCAC TTCGAAGTATTTCGGTATACTGGGACAGTTTCTTTATCTGGGACGACATT CGGGCAAATCTTGCGTAGAAAAGTGCCGACCTTGCTCCGACCGCGGCAAC ATTCAACGTAGATATCGTCAGGACCGGCAGGTAAGTCTACAGACCTCCCG ATGGAAGCTGCAACTCTTCTCGAAGACCGAACAACCGATTCGTCGTCGTT TGCGGGGTAAGCTACACAAAAGGCAACATAGAGGCAAGACTTCGGCGATG AAGTTTCGTTCCCATCATCATGGGTGGAAGGTGCACTCTCGCTGGCGAAT ATTTCTTCATCTGGAAGTAGTGACCCAACAAGCAGGTTAAGGCGCTGCGT ACGTTTCTTCTCTGCTTTCGTGCCGCACAGAGCGATGCTGCTGCCGCAAC AAGCAAGGCAAAGGCCACGACCGCGCTAGTGGTCGATGTCTCGGCGCAAC GGGAGAAGATGCGACGCGAGCTAGAGAAGGCGGAATTGACGGCTAAGTGG AACACTCTTCTGCAGGGGTTGGTGTTGAGTGAATCGGAGAGGAGGAAAAA GGTTGGCTCACTGGTATTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGT TGTTGTTGTTGTTGTTGTTGTTTTGTTGGTCGTGGTGGTCATCGTGGTCG TCGTGGTCGTCGTCGCCATCGTCGTTGTCGTTGTCGTAACTGCTGCCGTT GTCCTTGTTCAGATGAATTTTTGGGGTGATGTCGGTGTCAAAAGCACTTT AGGTAGAGCCAACACTGTTGCCGTGGATGCGCTGCTTGCTGTTTTGAGGT TACTTGCTATTGCATGCGAGTTTGTTGCTTGTAAAATTGTTGCCCCCGCC TTTTCCTCCCATCTTAGGAGCTCCCCTCGCTTCCGTTGTTCCTGCCGCGA AAAATCATAGCTGCACAACAAGATGGAAGATCTCAAGGGAAAGATCCGTG TATACGTGCGGGTCCGTCCTTTCAGCACGAAGGAGAAAGCTAGAGGCTGC ACGGAGGCGGTGACGGGGCAGGGCACGACCACCATCGCTGTTCAGGACCC CAGGGTCAAGGAGGAAAAGACCTTCGACTTCGATCAGGTAGAAACGTAAT CACAGTTAGTCTTGAGCTTTCGCAAATAAATGCTGTGCGCACATAAATGC TGTGAAGCAACATATCAACTCGATTACAATATTGAGCTGTCACATCTTTG AGTCCATAGACTTACCTTGTCTATACCGATTCATTCATGTTCGAGGAATG AGGTGGCGGGAAGAAAAGAAGATTGCAATAATAAGATACTTCGTATGTTT TTATCGGCTAATACTACTAGATGTCACTAAACCGCGCTGATGACGCCGAA TTCGTTTCGTTTGTCGTAGCGGGTACAGTTTGTGGTCAGCAATGGGCGTT CCGATGACGAGGGTACAGTTTGTGGTCAGCAACGGGCGTTCCGGTGACGA GGAAGCCAATTTCTCCCATCACTACTCCCACGCCCGAGAAACCTTAGTGA ACCATCCCTCTTTCAAATGCCCATAATGTACGTGATTCAGGTGTGGTCGG GAACGGAGGAGCAAGGAAACAACCAAGTCAACATCTTCAAGGACACCGGC TACCTGGTCACTTCCACCGTCGACGGCTACAACGTGTGCATCTTCGCCTA CGGCCAGGTATGCTCAAGACGGGAGAAGAAATAGAACATATCGCGGGACG GAAGCACCCATGAAGCAAAAAACTAATGGGGGAACATATCAAAGGAGGCG AGTTGAGCGTACGTGAACGAACAGCAATGACAGCTTGAGAGTCCGAGCTG TCTAGCGCGGTAGGAGCGGAATCCCCGCAAATGACGGCAACCTTCCAGCA ATGACGAGCGTTTTTGCGGGACTGCTGCCACTCAACGTCGTTTGTAAAGA GAAGCTAGCGAATCTGTGTAGTGTTCATGTTTACTCTGCCCCGCTTCGCA GATCCACCATCGTCCGGCGTGTGTGCTCCGCGTCCGAGGAAGAGCAAATG TTCATCCTGAACGCAGGCCCTGTAGATCCGAATCCTTAGATCTCCGCCTG AAAGCATTGCTTTGGTTTTATCGTATCATATCATACCAGTTATTGTTTAT TGGCCCCATCGTCACAACAAACCGGCTCTGGAAACCCCCACCTGGCGATC GCCGCTGGCCATACCGACGGTGTAGGCAGCAGCAGCAGCGGTGGCAAGTT CGTGCTTTGTTTCACGCTCCTGCCGCTTTCCCATGACACTGCTGTAAAAT TTACCGTCGCAGCATGTTTTAGCACTGTTCCAATATTGAGGAACATGCTC ATGATACCGTCATATAATATAATATGACAAAAACAATTCCTATGGTACGG GCCGATGAACAGACCGGTTCCGGGAAAACCTACACGATGTTCGGTGCGGG CGGAATCGGTGGTGGGATCGACGCGACAGCGGGAGTGTGCGACGGGACCG CGGGAGTGACACCTCGAGCGGTGCTGGAACTCTTCCGCGTGCTGAAGGAA AGGGAGGGTCAGTACGAGTATAGCGTGAAGGTGTCCATGTTCGAGCTATA CCGAGACGGCCTGCGAGATCTGGTGAGAAAACAAGAATTAGTTTGTCCGA AAAGTAGTTCGCTGCACACCAGAGTACGGCGAAGAGTCGATCAGCAAGGC CAATAACGGAGAGAGCCCTCGAAAATTTGTCGATCCCAGCCGTCTCTCAC CAAGCATTGTTAATCTTCTTGAACGAAGCTCGGATTCTTTCATTCGGATG GCTGTTATGGATAAGGGATTCCGGACATGTTAGCCGAAAACAAAGTCTTG AGACTTTATGTTCGATCTAGAATGTTGTAGGGGGGGACCAGTACATGAAT ACAGCGTCACAAGGCGTCCATGGTCGAGCATCACCGAGACTGTCAAGCTC ACCTGGTATATGGGACTGCTTCAGTTGGTAGCTCATTCGGCCACTGCTGC TGTTGATTTACCCGCGGAGGAAACAGCAGGCAAGCCGTACATGCACGACG CCAAACATGTGCCTGTCAATTTCGTTTCGCAACCTAAGTTTCTGACGGCG TTGGCGCACGGTCGGCCCGCTCGCACGCGTGTTTTGGTACTTCGTCAACC CTCAGCTCGCCAAGAAGGGAAGCCACACAAAACTTGTCATCAAGCTTGCC GAGCACAGCGGTACTGGTCTGGTGGTAGTCGAAGGCGGGGTGGAGAGGGA CGCCAACGACATCAAAACGATGATCGACGTCATTCAGGTGACGCACAAGC ACTACGATATTAGAAGAGCAATTCAGAATGGAAAATAGCTGCAGCGACAT CAAAAACACGATTCGTACAACAGGGTTTGACGAAATCAGCTTCTAACGTC GAGGTCGAACGTGCCAGGAAGAGCCGAGAGGGGTGGAAAGACGACTGATA CCTCGCCGGCCGCCCTTCAAAAGAACCTTACGGAACTTGAAGCTCCTAAA AATGCAGGAGACTCGTCGTGGGTGAAAATTCAACAGCCTCGTAATTCGCC GTGTAAGTGACCAACCGAATGAAGCTCACCCACATTGCACCATTCTGAAA AGCAATGGGAGTTGTCGGTGCACGGTGTGTCCTCGACGAAGGCTAATGCC TTTCGCTTGGTTAACGTAATGATAACGAGAGCACGTGTCAAAAATACGCT TTGACCGCGCGTGACAGTCCAAACACACCACCCCACCCCACACCCTCATC CTCCTTCCTCCCTCCTCCTCTCTCCACCGTACCTCGCCGCAGGTGGGTGC TGAGGGGCGCACGGTGTCCTCGACCCAGATGAACTCGGACAGCTCTCGGT CCCACCTGCTGTGCTCGATCGTGGTGACCTCCACCAACCGCCGAACGGGG TCGTCCCTCCGCGGGAAGCTCACGCTGGTGGACCTCGCGGGTTCGGAGCG AGTGGGAAAATCGGGGGCCTCCGGGGACCAGTTAAAAGAAGCCCAGAGCA TCAACAAGTCTCTCTCGGCGCTGGGGGACGTCATCGGAGCCCTGACCACG GGGGTCAAGCACATCCCCTACCGCAACCACGCGCTGACCATGATGATGAG CGACTCCCTGGGAGGGAACAGCAAAACTCTCATGTTCGTCTGCGCGTCCC CGGCAGATTATAACGCCTCGGAGACAATCAACGCCCTGCAGTTCGCCGCG CGGTGCAAGAGCGTCACGAATTCTGCCGGGCCCGGCGGAGGAGGCGCGGC GGCCGCGGCGCAGGTGCAGGCCCTCAGGAGGGAGCTTCAAAAGCTGAAAG GGGGAGATGGGGGGGGAAACGAAGCGGCCAAGAAACCAACCCAGCTCGCT CGGCCTTCGTAG
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig164:190944..205155+

>mRNA_P-littoralis_Contig164.34.1 ID=mRNA_P-littoralis_Contig164.34.1|Name=mRNA_P-littoralis_Contig164.34.1|organism=Pylaiella littoralis U1_48|type=CDS|length=3813bp|location=Sequence derived from alignment at P-littoralis_Contig164:190944..205155+ (Pylaiella littoralis U1_48)
ATGGCAAACCCAGAGGGCGGCAACGGGGGTAAGACGAGCACGGCCGCCGA
GACGAAAAAGAGAGAGAGCGGCGGCGGCGGCGGCGGCGGCGGTAGCACCA
GGAGGAAACGCTCACACCCGAATACCGAAGGCGGTGAAATCAATAACAAC
AACGACAACAACACCGGCACCGGTGGAGAGAGCAATGGCCACGATAGAAA
GCACCAGCATCATCAACACCGACGCCACCGACACCGGCACCGGCATGGAC
CCAAGTCTACAAGTGGGACCAACGACAACAACACAGCCTCAGACACAGAT
GGAGCGCAAGATGAGGACAAGCTTAAGTTACTGATAGAGTTCATCCCCTA
TGTCGGACTCGGCGACGCTGCGCGCGACAACATGGTGCGCTCTATTCTCT
GCGCCGCTGACGCCGAAGAGCTCGTCGGGACAGACGACTATGGCAACACC
CTCCTCATCCTCGCATGCCAGTACCGGCGCAAGGCCCTCGTCCCACTTAT
CCTGGCAAGAAGCGGCGGTGCCATAGACTTAGACGCGGTGAATTCAGAGG
GGGCCTGCGCGTTGCACTTCGCGTGCTACAAGGATAGCATCTGCGTGGAG
ACAGCTTTTCTTCTGCTTGAGCGCGGGGCCAAGCCTGAAGTCGTCGAAAA
TACTCACGGGTGCACGCCGCTACACTACGCGGCGGGGGCAGGAGACGTCG
ACCTGTGCAAGCGGCTGATAGAGAAGGGGGCCAGGGTGAACACGTGGGAC
TTTTACCAGTTCACAGCCGTCGACTACGCCAAGCAGTCCGGAGCGACGGT
CTGCGTGGCTTACCTAGAGGAAGTTTCGACACCGGGAGCTACCACCGCCG
CGACGGTCAAGTCTTCTCCCGGGCGAGGCGGTCTCGTCACAATTTCGGGC
GTGGAGGTCCCGTCCGGGCTCCTCCGTGACGATAGCTTCGACACCGTGGA
TGACGATTTTCGCCCGCGAGGGCGGGCAGCAAAGGCGACCGTTGGTGGTG
GTGGAGAAAATGCAGCAGCGTTGGGGCGGCAGCCAAGCAGCGGGAGTGAT
AACTTTAGCGTTGGTGGGGAGGACAGCGGGGGCGGTGAGGGGTATTGGGG
CCGACAGGGCGACCCGGAGTCCGGTTTGGCTTATTACCTCAACGAAAAGA
CCGGCGAGAGCATGTGGGAGAAGGACCTGCTGGTGCAGGCGCAGGCTCTC
CACGATGATCTCAACGAGGAGGAGCCCTCGCCGCAACTGGCGCAGTGGTT
GAGGCAGCAGACGCAACGGGCGCGCCTAGTCGCCTTCCTTGGGCGGCACG
ACCCTCTCAAAATCATGCAGGCGGATGACATGCTCAAGCGTCGACTTGGT
GACGAAGAGGCTCTTTTTGCCGAGCTGGTCAAGCAGTACTCCGCGGAGGA
GGAGCCCGACTTTGCCGCCCTGGTCGAGGGAGCGGCGCGGGGATTCCGTG
ACCACAAAATCGCCTCCCCTGCTCCCGCTGCAACAGCCTCTGATGCCAGC
ATCGCTGCCACAAGTCGACCGTCGTCACCAACTACAGCCCCCGGAGCCAC
CGCAAAGGAGGAAGCCTTAGAAACGTTGACGGCAACGTTAAATCGAGGGG
TTTCTGTGGCTGCCGCGGTGGGGTCGACCAAGCCGGGCGGGGGCGGCGGG
GGCGGTGGCGGTGGCGGGAGGCCGCCGACCGCCCCGGCACAAAGACCGGG
GTTGCGGACCGGAGCACGGACGTCGACGGCGATGCTGCGGATGACGCGGA
GCGCCAAGGATCTCCTGGGAACCTCGAGCCTGATCCCTACGGCGCCGGCC
CAGCTATCGCCTGAAGATCTGAAGAACCTACAGGAGCAAGCTCAAAAGCG
GCTTGACGACGCCAAAGCCGCTCACGAAGAAAGGCTAGAGGCGGAGCGCA
AGCTGCACAGAGACAAGGCGGCGGAGGGGGAAGGGGCCATCGCGAGGATG
GAACACGATCTAAAGGAGGCGTCCGCCGAGGAGGAGAGGTTGCGAGCTAA
AATAGAGGAGCAGAAACAGCTGGCGGCTTCCCTGGAGGGCCAGCTGCAAG
AGAAGTTGGCGAGCCAATCAGGGAAAGTGAAGGCTCTATCGGAGGAGGCG
GCGGCCCTGAGGAGTGAGCTTAAGGCCGCTGTCGAGGAAACGCAGGCTCT
CTCTGACGTGGTGGATAGGGAGCAGTCTGGGGCGGCGTCTGCGGCGGAAT
CGAGCCGTCGAGACATGGAGACAAAGGCCAAGGAGGAATCCGACCTTGTG
CATGAATGTCAGGCGTCGGTGGCGGCGGCGAAAAGCGACGCGGAGCGTGC
GCGGCGAGAGTTCGCGGCCCGTCGCCAAGTGGAGCAGCAAAACATCTTGG
ACAGGCTGCGCGGGCAGCTGTCCCTGCTCCAGAAAGAGCTCGCCGCGGCA
AAGTCAAAGGCGGCGGTGGACATCAGCCGAGCACAGAGCGATGCTGCTGC
CGCAACAAGCAAGGCAAAGGCCACGACCGCGCTAGTGGTCGATGTCTCGG
CGCAACGGGAGAAGATGCGACGCGAGCTAGAGAAGGCGGAATTGACGGCT
AAGTGGAACACTCTTCTGCAGGGGTTGGTGTTGAGTGAATCGGAGAGGAG
GAAAAAGCTGCACAACAAGATGGAAGATCTCAAGGGAAAGATCCGTGTAT
ACGTGCGGGTCCGTCCTTTCAGCACGAAGGAGAAAGCTAGAGGCTGCACG
GAGGCGGTGACGGGGCAGGGCACGACCACCATCGCTGTTCAGGACCCCAG
GGTCAAGGAGGAAAAGACCTTCGACTTCGATCAGGTGTGGTCGGGAACGG
AGGAGCAAGGAAACAACCAAGTCAACATCTTCAAGGACACCGGCTACCTG
GTCACTTCCACCGTCGACGGCTACAACGTGTGCATCTTCGCCTACGGCCA
GACCGGTTCCGGGAAAACCTACACGATGTTCGGTGCGGGCGGAATCGGTG
GTGGGATCGACGCGACAGCGGGAGTGTGCGACGGGACCGCGGGAGTGACA
CCTCGAGCGGTGCTGGAACTCTTCCGCGTGCTGAAGGAAAGGGAGGGTCA
GTACGAGTATAGCGTGAAGGTGTCCATGTTCGAGCTATACCGAGACGGCC
TGCGAGATCTGCTCGCCAAGAAGGGAAGCCACACAAAACTTGTCATCAAG
CTTGCCGAGCACAGCGGTACTGGTCTGGTGGTAGTCGAAGGCGGGGTGGA
GAGGGACGCCAACGACATCAAAACGATGATCGACGTCATTCAGGTGGGTG
CTGAGGGGCGCACGGTGTCCTCGACCCAGATGAACTCGGACAGCTCTCGG
TCCCACCTGCTGTGCTCGATCGTGGTGACCTCCACCAACCGCCGAACGGG
GTCGTCCCTCCGCGGGAAGCTCACGCTGGTGGACCTCGCGGGTTCGGAGC
GAGTGGGAAAATCGGGGGCCTCCGGGGACCAGTTAAAAGAAGCCCAGAGC
ATCAACAAGTCTCTCTCGGCGCTGGGGGACGTCATCGGAGCCCTGACCAC
GGGGGTCAAGCACATCCCCTACCGCAACCACGCGCTGACCATGATGATGA
GCGACTCCCTGGGAGGGAACAGCAAAACTCTCATGTTCGTCTGCGCGTCC
CCGGCAGATTATAACGCCTCGGAGACAATCAACGCCCTGCAGTTCGCCGC
GCGGTGCAAGAGCGTCACGAATTCTGCCGGGCCCGGCGGAGGAGGCGCGG
CGGCCGCGGCGCAGGTGCAGGCCCTCAGGAGGGAGCTTCAAAAGCTGAAA
GGGGGAGATGGGGGGGGAAACGAAGCGGCCAAGAAACCAACCCAGCTCGC
TCGGCCTTCGTAG
back to top