prot_P-littoralis_Contig164.19.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig164.19.3
Unique Nameprot_P-littoralis_Contig164.19.3
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length372
Homology
BLAST of mRNA_P-littoralis_Contig164.19.3 vs. uniprot
Match: A0A6H5JJW9_9PHAE (Ribonuclease n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJW9_9PHAE)

HSP 1 Score: 385 bits (989), Expect = 5.270e-130
Identity = 224/349 (64.18%), Postives = 253/349 (72.49%), Query Frame = 0
Query:   27 TAFRRSPRLAAEAHRRHRSSSGAFAAGPGSALCTSARK---GSRRALAVRTRAXXXXXXXXXXXXXXASVSSAAGREDSGADIAKPKRAKRVSNAKGVGAIPAGTKKKACTLGRSREDRKRGEGFALVIGVDEAGRGPFAGPVVAAACFVPPDINILGIRDSKKVPRHSGREALYKELTESPGVIWATSEVGSRRIDEINILEATKEAMTECAFEVISKASKAKXXXXXXXXXXXXXXXXSKPPKPFVLVDGNFTPPGL--AKMDSEFVVGGDGLEYCIAAASIIAKVTRDRLMIEFGERWPMYGFERHKGYATSAHRDAIREHGMVEIHRRSFLKKMEASGGKLSEHK 370
            TA RRSPRLAAE  RRH  SSGAF AGP    C         +RRA+A   R+              +S   AAG E SGAD+   +R +RVS  KGV A     KK   TLGR+RE+RK  EGF  VIG+DEAGRGPFAGPVVAAAC +PPD+NILGI+DSKK+ +HS RE L+KELTE+PGVIWATSEVGS RIDEINILEATKEAMT C  EV SK+ +                  +   KPFVLVDGNFTPPGL  AK+++E VVGGDGLEYCIAAASIIAKVTRDRLMIEFGERWP++GFERHKGY T+AHRDAIREHGMVEIHRRSFLK ME+SGGKL+E+K
Sbjct:   23 TAARRSPRLAAEVRRRH-GSSGAFNAGP----CPPREPLGVSNRRAIATSARSK-------------SSSPLAAGAESSGADVRPKRRIRRVSKPKGVTASVQ--KKTKSTLGRTRENRKLAEGFDAVIGLDEAGRGPFAGPVVAAACMIPPDVNILGIQDSKKITQHSDRETLFKELTETPGVIWATSEVGSSRIDEINILEATKEAMTNCVLEVCSKSVEPSANKGMKTNWKKN----ASDKKPFVLVDGNFTPPGLGDAKVEAECVVGGDGLEYCIAAASIIAKVTRDRLMIEFGERWPVFGFERHKGYGTAAHRDAIREHGMVEIHRRSFLKNMESSGGKLAEYK 347          
BLAST of mRNA_P-littoralis_Contig164.19.3 vs. uniprot
Match: D8RCY3_SELML (Ribonuclease (Fragment) n=5 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RCY3_SELML)

HSP 1 Score: 186 bits (471), Expect = 5.200e-54
Identity = 101/205 (49.27%), Postives = 131/205 (63.90%), Query Frame = 0
Query:  151 VIGVDEAGRGPFAGPVVAAACFVPPDINILGIRDSKKVPRHSGREALYKELTESPGVIWATSEVGSRRIDEINILEATKEAMTECAFEVISKASKAKXXXXXXXXXXXXXXXXSKPPKPFVLVDGNFTPPGLAKMDSEFVVGGDGLEYCIAAASIIAKVTRDRLMIEFGERWPMYGFERHKGYATSAHRDAIREHGMVEIHRRSF 355
            VIGVDEAGRGP AGPVVAAAC +P D++I GI DSKK+     RE LY ++T +PGV ++   V + RIDEINIL+AT EAM  C  E+                         +   P++L+DGN  P GL+   +  VV GD   + IAAASI+AKVTRDRLM ++ +RWP+YGF+ HKGY T++H  A+ +HG  +IHRRSF
Sbjct:    3 VIGVDEAGRGPLAGPVVAAACIIPEDVDIQGIDDSKKLTAEK-REQLYSQITSTPGVRFSICVVDAPRIDEINILQATMEAMETCVEELTGNG---------------------RDHPPYILIDGNRIPGGLSGKHARSVVKGDAESHVIAAASILAKVTRDRLMEDYDKRWPLYGFKDHKGYGTASHTAALLKHGPCDIHRRSF 185          
BLAST of mRNA_P-littoralis_Contig164.19.3 vs. uniprot
Match: A0A225WDA0_9STRA (Ribonuclease n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WDA0_9STRA)

HSP 1 Score: 187 bits (476), Expect = 1.220e-53
Identity = 123/258 (47.67%), Postives = 149/258 (57.75%), Query Frame = 0
Query:  106 IAKPKRAKRVSNAKGVGAIPAGTKKKACTLGRSREDRKRGEGFALVIGVDEAGRGPFAGPVVAAACFVPPDINILGIRDSKKVPRHSGREALYKELTESPGVIWATSEVGSRRIDEINILEATKEAMTECAFEVISKASKAKXXXXXXXXXXXXXXXXSKPPKPFVLVDGNFTPPGLAKMDSEFVVGGDGLEYCIAAASIIAKVTRDRLMIEFGERWPMYGFERHKGYATSAHRDAIREHGMVEIHRRSF--LKKMEA 361
            I  P RA R S  K         K+   TL R  E R   +G+  VIGVDEAGRGP AGPVVAAAC VP D+ I G+ DSKK+     RE L++ LT  P + +A     ++RIDEINIL+A+ E+MT+   EV  K  + K                      FVLVDGN  PP L ++ +E VV GD   Y IAAASIIAKVTRDRLM E+ E++P YG  +HKGY T AH  AI +HG  EIHR +F  LK  EA
Sbjct:   36 IPVPSRAPRASKPKKT--AKKDEKQSISTLSRVFETRYEAKGYTTVIGVDEAGRGPLAGPVVAAACHVPLDVTIEGVDDSKKISEPQ-REELFELLTNHPKITYAVHVNSAQRIDEINILQASLESMTKSVNEVAEKLQQDKT---------------------FVLVDGNKLPPTL-ELPAEAVVKGDSKVYSIAAASIIAKVTRDRLMREYDEKFPQYGLAQHKGYPTRAHVAAIAKHGPCEIHRMTFAPLKPKEA 268          
BLAST of mRNA_P-littoralis_Contig164.19.3 vs. uniprot
Match: G4Z1P2_PHYSP (Ribonuclease n=4 Tax=Phytophthora TaxID=4783 RepID=G4Z1P2_PHYSP)

HSP 1 Score: 186 bits (473), Expect = 1.640e-53
Identity = 114/230 (49.57%), Postives = 142/230 (61.74%), Query Frame = 0
Query:  134 TLGRSREDRKRGEGFALVIGVDEAGRGPFAGPVVAAACFVPPDINILGIRDSKKVPRHSGREALYKELTESPGVIWATSEVGSRRIDEINILEATKEAMTECAFEVISKASKAKXXXXXXXXXXXXXXXXSKPPKPFVLVDGNFTPPGLAKMDSEFVVGGDGLEYCIAAASIIAKVTRDRLMIEFGERWPMYGFERHKGYATSAHRDAIREHGMVEIHRRSF--LKKMEA 361
            TL R+ E R + +G+  VIGVDEAGRGP AGPVVAAAC VP D+ I G+ DSKK+     REAL++ LT  P + +A     ++RIDEINIL+A+ E+MT+ A EV  +  +                      K FVLVDGN  PP L ++ +E VV GD   Y IAAASIIAKVTRDRLM E+ E++P YG  +HKGY T  H  AI +HG   IHR +F  LK  EA
Sbjct:   35 TLARTFETRYQAKGYTTVIGVDEAGRGPLAGPVVAAACHVPLDVTIEGVDDSKKISEPQ-REALFELLTNHPSITYAVHVNSAQRIDEINILQASLESMTKSANEVAERLQQTD--------------------KTFVLVDGNKLPPTL-ELPAEAVVKGDSKVYSIAAASIIAKVTRDRLMREYDEQYPQYGLAKHKGYPTRDHVAAIAKHGPCAIHRMTFAPLKPKEA 242          
BLAST of mRNA_P-littoralis_Contig164.19.3 vs. uniprot
Match: W2QYI7_PHYPN (Ribonuclease n=12 Tax=Phytophthora TaxID=4783 RepID=W2QYI7_PHYPN)

HSP 1 Score: 182 bits (463), Expect = 1.110e-51
Identity = 112/230 (48.70%), Postives = 139/230 (60.43%), Query Frame = 0
Query:  134 TLGRSREDRKRGEGFALVIGVDEAGRGPFAGPVVAAACFVPPDINILGIRDSKKVPRHSGREALYKELTESPGVIWATSEVGSRRIDEINILEATKEAMTECAFEVISKASKAKXXXXXXXXXXXXXXXXSKPPKPFVLVDGNFTPPGLAKMDSEFVVGGDGLEYCIAAASIIAKVTRDRLMIEFGERWPMYGFERHKGYATSAHRDAIREHGMVEIHRRSF--LKKMEA 361
            TL R  E R   +G+  VIGVDEAGRGP  GPVVAAAC VP D+ I G+ DSKK+     REAL++ LT  P + +A     ++RIDEINIL+A+ E+MT+   EV  +  +                      K FVLVDGN  PP L ++ +E V+ GD   Y IAAASIIAKVTRDRLM E+ E++P YG  +HKGY T  H  AI +HG  EIHR +F  LK  EA
Sbjct:   62 TLSRIFETRYEAKGYTTVIGVDEAGRGPLVGPVVAAACHVPLDVTIPGVDDSKKILEPQ-REALFELLTTHPSITYAVHVNSAQRIDEINILQASLESMTKSVNEVAERLQQKD--------------------KTFVLVDGNKLPPTL-ELPAEAVIKGDSKVYSIAAASIIAKVTRDRLMREYDEKFPQYGLAQHKGYPTRGHVAAIAKHGPCEIHRMTFAPLKPKEA 269          
BLAST of mRNA_P-littoralis_Contig164.19.3 vs. uniprot
Match: A0A2P6V851_9CHLO (Ribonuclease n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V851_9CHLO)

HSP 1 Score: 182 bits (462), Expect = 9.350e-51
Identity = 102/222 (45.95%), Postives = 130/222 (58.56%), Query Frame = 0
Query:  134 TLGRSREDRKRGEGFALVIGVDEAGRGPFAGPVVAAACFVPPDINILGIRDSKKVPRHSGREALYKELTESPGVIWATSEVGSRRIDEINILEATKEAMTECAFEVISKASKAKXXXXXXXXXXXXXXXXSKPPKPFVLVDGNFTPPGLAKMDSEFVVGGDGLEYCIAAASIIAKVTRDRLMIEFGERWPMYGFERHKGYATSAHRDAIREHGMVEIHRRSF 355
            T  R  E+    +G+ LV GVDEAGRGP AGPVVAAAC VPP ++I+GI DSKK+     REALY++LT  P ++WA   V +  ID INIL+A  +AM   A  +  +                           FVLVDGN  P GL    S  +V GD   +CIAAAS+IAKVTRDR+M ++ E+WP Y F  HKGY    H +A+R+HG   +HRR+F
Sbjct:   97 TASREFEEELWAQGYKLVAGVDEAGRGPLAGPVVAAACVVPPHVSIVGIDDSKKLSAEQ-REALYEQLTGHPDILWAAQVVDAGEIDTINILQAALKAMEGAAGALAQRPD-------------------------FVLVDGNRLPKGLDPERSRTLVKGDSRCFCIAAASVIAKVTRDRIMEQYHEQWPQYNFAGHKGYCVPEHVEAVRKHGPCPVHRRTF 292          
BLAST of mRNA_P-littoralis_Contig164.19.3 vs. uniprot
Match: A0A7S1TPP4_9STRA (Uracil-DNA glycosylase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TPP4_9STRA)

HSP 1 Score: 187 bits (476), Expect = 3.700e-50
Identity = 110/233 (47.21%), Postives = 143/233 (61.37%), Query Frame = 0
Query:  135 LGRSREDRKRGEGFALVIGVDEAGRGPFAGPVVAAACFVPPDINILGIRDSKKVPRHSGREALYKELTESPGVIWATSEVGSRRIDEINILEATKEAMTECAFEVISK--ASKAKXXXXXXXXXXXXXXXXSKPPKP---FVLVDGNFTPPGLAKMDSEFVVGGDGLEYCIAAASIIAKVTRDRLMIEFGERWPMYGFERHKGYATSAHRDAIREHGMVEIHRRSF--LKKME 360
            L + RE   RGEG +LV+GVDEAGRGP AGPVV AAC +P DI+I GI DSK+      REALY  +  +PGV WA + + +RRIDEINIL+AT E M +C   ++ K  AS+                  ++P +    + L+DGN  P  L     E +V GDG EY I AASI+AKVTRDRLM+++   +P Y  ++HKGY T+ H  AI +HG   IHRR+F  LK M+
Sbjct:  130 LPKHREQTVRGEGMSLVMGVDEAGRGPLAGPVVTAACAMPVDISIPGINDSKQTTEEQ-REALYDLIVATPGVRWAVAVIDARRIDEINILKATMEGMAKCCAAIMEKKDASRPADASRSGCYVVTGSCGEAEPFRKASCYALIDGNRVPQALP-CRGEALVKGDGREYIIGAASILAKVTRDRLMVQYAGMYPEYDLQQHKGYPTAGHMAAIHKHGPCPIHRRTFAPLKHMD 360          
BLAST of mRNA_P-littoralis_Contig164.19.3 vs. uniprot
Match: A0A0P1ACX4_PLAHL (Ribonuclease n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ACX4_PLAHL)

HSP 1 Score: 178 bits (451), Expect = 4.130e-50
Identity = 109/235 (46.38%), Postives = 143/235 (60.85%), Query Frame = 0
Query:  134 TLGRSREDRKRGEGFALVIGVDEAGRGPFAGPVVAAACFVPPDINILGIRDSKKVPRHSGREALYKELTESPGVIWATSEVGSRRIDEINILEATKEAMTECAFEVISKASKAKXXXXXXXXXXXXXXXXSKPPKPFVLVDGNFTPPGLAKMDSEFVVGGDGLEYCIAAASIIAKVTRDRLMIEFGERWPMYGFERHKGYATSAHRDAIREHGMVEIHRRSF--LKKMEASGGKL 366
            TL R  E R + +G++ VIGVDEAGRGP AGPVVAAAC VP D+ I G+ DSKK+ +   REAL++ LT  P + +A     ++RIDEINIL+A+ EAMT+   +V  +  +                        FVLVDGN  PP L  + +E VV GD   + IAAASIIAKVTRDR+M  + +++P YG  +HKGY T AH  AI +HG  +IHR +F  LK  + S  K+
Sbjct:   53 TLSRQFETRYKAKGYSTVIGVDEAGRGPLAGPVVAAACHVPLDVVIEGVDDSKKILQER-REALFELLTTHPSITYAVHVNSAQRIDEINILQASLEAMTKAVNDVTKRLLQKDNI--------------------FVLVDGNKLPPTL-DLPAEAVVKGDSKVFSIAAASIIAKVTRDRIMRNYDDQYPQYGLAQHKGYPTRAHVAAIAKHGPCKIHRMTFAPLKPKDMSKSKI 265          
BLAST of mRNA_P-littoralis_Contig164.19.3 vs. uniprot
Match: A0A485LSD3_9STRA (Ribonuclease n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LSD3_9STRA)

HSP 1 Score: 178 bits (451), Expect = 5.500e-50
Identity = 102/222 (45.95%), Postives = 133/222 (59.91%), Query Frame = 0
Query:  134 TLGRSREDRKRGEGFALVIGVDEAGRGPFAGPVVAAACFVPPDINILGIRDSKKVPRHSGREALYKELTESPGVIWATSEVGSRRIDEINILEATKEAMTECAFEVISKASKAKXXXXXXXXXXXXXXXXSKPPKPFVLVDGNFTPPGLAKMDSEFVVGGDGLEYCIAAASIIAKVTRDRLMIEFGERWPMYGFERHKGYATSAHRDAIREHGMVEIHRRSF 355
            TL R  E R   +G++ V+GVDEAGRGP AGPVVAAAC+VP D+   GI DSK++   + RE L+++LT    V +A       RIDEINIL+AT E+MT+    +  KA                          + L+DGN  PP   K+  EFV+ GDG  + IAAASIIAKVTRDR+M+++ ++WP Y F +HKGY T AH  AI +HG   IHR +F
Sbjct:   76 TLSRDFEQRMVNKGYSYVVGVDEAGRGPLAGPVVAAACYVPLDVTFEGIYDSKQL-NEAQRELLFEQLTTHKDVHYAVHINSPARIDEINILQATLESMTKSVEGLAIKAD-------------------------YALIDGNKMPP--LKIPGEFVIKGDGKVFAIAAASIIAKVTRDRIMVDYDKQWPAYNFAQHKGYGTRAHMAAIHKHGASPIHRMTF 269          
BLAST of mRNA_P-littoralis_Contig164.19.3 vs. uniprot
Match: H3G7Z9_PHYRM (Ribonuclease n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G7Z9_PHYRM)

HSP 1 Score: 175 bits (444), Expect = 6.340e-50
Identity = 105/216 (48.61%), Postives = 131/216 (60.65%), Query Frame = 0
Query:  140 EDRKRGEGFALVIGVDEAGRGPFAGPVVAAACFVPPDINILGIRDSKKVPRHSGREALYKELTESPGVIWATSEVGSRRIDEINILEATKEAMTECAFEVISKASKAKXXXXXXXXXXXXXXXXSKPPKPFVLVDGNFTPPGLAKMDSEFVVGGDGLEYCIAAASIIAKVTRDRLMIEFGERWPMYGFERHKGYATSAHRDAIREHGMVEIHRRSF 355
            E R   +G+  VIGVDEAGRGP AGPVVAAAC VP D+ + G+ DSKK+     REAL++ LT  P + +A     ++RIDEINIL+A+ E+M     EV  +  +                      K FVLVDGN  PP L ++ +E VV GD   Y IAAASIIAKVTRDRLM ++ E++P YG  +HKGY T AH  AI EHG   IHR +F
Sbjct:    2 EARCEAKGYTTVIGVDEAGRGPLAGPVVAAACHVPLDVTLDGVDDSKKILEPQ-REALFELLTNHPSITYAVHVNSAQRIDEINILQASLESMAYSVNEVAERLQQKD--------------------KTFVLVDGNKLPPML-ELPAEAVVKGDSKVYSIAAASIIAKVTRDRLMRQYDEQYPQYGLAQHKGYPTRAHVAAIAEHGACAIHRMTF 195          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig164.19.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JJW9_9PHAE5.270e-13064.18Ribonuclease n=2 Tax=Ectocarpus TaxID=2879 RepID=A... [more]
D8RCY3_SELML5.200e-5449.27Ribonuclease (Fragment) n=5 Tax=Selaginella moelle... [more]
A0A225WDA0_9STRA1.220e-5347.67Ribonuclease n=1 Tax=Phytophthora megakarya TaxID=... [more]
G4Z1P2_PHYSP1.640e-5349.57Ribonuclease n=4 Tax=Phytophthora TaxID=4783 RepID... [more]
W2QYI7_PHYPN1.110e-5148.70Ribonuclease n=12 Tax=Phytophthora TaxID=4783 RepI... [more]
A0A2P6V851_9CHLO9.350e-5145.95Ribonuclease n=1 Tax=Micractinium conductrix TaxID... [more]
A0A7S1TPP4_9STRA3.700e-5047.21Uracil-DNA glycosylase n=1 Tax=Phaeomonas parva Ta... [more]
A0A0P1ACX4_PLAHL4.130e-5046.38Ribonuclease n=1 Tax=Plasmopara halstedii TaxID=47... [more]
A0A485LSD3_9STRA5.500e-5045.95Ribonuclease n=1 Tax=Aphanomyces stellatus TaxID=1... [more]
H3G7Z9_PHYRM6.340e-5048.61Ribonuclease n=1 Tax=Phytophthora ramorum TaxID=16... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 366..371
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 73..94
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 69..94
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 129..370
e-value: 4.1E-60
score: 205.1
IPR024567Ribonuclease HII/HIII domainPFAMPF01351RNase_HIIcoord: 152..356
e-value: 2.4E-28
score: 99.4
IPR022898Ribonuclease HIIPANTHERPTHR10954:SF18RIBONUCLEASE HIIcoord: 141..359
IPR022898Ribonuclease HIICDDcd07182RNase_HII_bacteria_HII_likecoord: 152..357
e-value: 1.93229E-81
score: 244.587
IPR001352Ribonuclease HII/HIIIPANTHERPTHR10954RIBONUCLEASE H2 SUBUNIT Acoord: 141..359
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 146..356

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig164contigP-littoralis_Contig164:107141..114584 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig164.19.3mRNA_P-littoralis_Contig164.19.3Pylaiella littoralis U1_48mRNAP-littoralis_Contig164 107041..115500 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig164.19.3 ID=prot_P-littoralis_Contig164.19.3|Name=mRNA_P-littoralis_Contig164.19.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=372bp
MRLVVASASGLLAMGIKKAASTTAISTAFRRSPRLAAEAHRRHRSSSGAF
AAGPGSALCTSARKGSRRALAVRTRAGSSSSSPSPSSLSLASVSSAAGRE
DSGADIAKPKRAKRVSNAKGVGAIPAGTKKKACTLGRSREDRKRGEGFAL
VIGVDEAGRGPFAGPVVAAACFVPPDINILGIRDSKKVPRHSGREALYKE
LTESPGVIWATSEVGSRRIDEINILEATKEAMTECAFEVISKASKAKSKK
AKSKKAKSKKAKGSKPPKPFVLVDGNFTPPGLAKMDSEFVVGGDGLEYCI
AAASIIAKVTRDRLMIEFGERWPMYGFERHKGYATSAHRDAIREHGMVEI
HRRSFLKKMEASGGKLSEHKG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR024567RNase_HII/HIII_dom
IPR022898RNase_HII
IPR001352RNase_HII/HIII
IPR012337RNaseH-like_sf